Pseudoliparis swirei (Mariana hadal snailfish): 130203077
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Entry
130203077 CDS
T09868
Name
(RefSeq) neurexin-3b-like
KO
K07377
neurexin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130203077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130203077
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
130203077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
Syndecan
EGF
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
130203077
NCBI-ProteinID:
XP_056284943
LinkDB
All DBs
Position
12:complement(23082683..23263749)
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AA seq
1063 aa
AA seq
DB search
MLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDIRLELSRLARIVDPKMKLQ
GDVVFKCENVPTLDPISFETPDSFLALPKWTTKRVGSISFDFRTSEANGLILFTHGKPQD
RRDAKGQKNNKVDFFAVELLDGGLYLLLDMGSGTIKVKATQAKVNDGAWHHVDIQRDGRS
GIISVNSRRSPFTASGENEILDLEGDLYLGGLPDSRAGLVLPTELWTAMLNYGYVGCVRD
LFIDGRSKDIRRVAAAQNATGITASCSKAAGRQCDSKPCRNNGACKEGWNRFVCDCIGTG
FWDATCEREASVLSFDGSMYMKVVIPAAVPTEAEDVSLRFTSQRAFGLLMAATSRESADT
LRLELDGGRVKLTVNLDCVRIHCNTSQGPEVLFAGQKLNDNEWHSVRVVRRGKVFKLTVD
DDVAEGTMAGDHTRLEFNNVETGILTERRFVSSAPSSFIGHLQSLKFNGMQYIDMCKNGD
IDYCELNARFGLRVIIADPVTFRTKGSYLGLATLQAYTTMHLFFQFKTTSPDGFILFNSG
DGNDFIAVEMVKGFVHYVFDLGNGPSLLKGNSDNALSDNKWHSVVITRDAANTHTLKVDA
KSVTQNVNGAKNLDLKGDLFVGGLGPNMYQNLPKLVVSREGFQGCLASVDLNGRLPDLIN
DALFRSGQVERGCEGPSTTCQEDSCANMGVCIQQWENFTCDCSMTSYSGTHCNDPGTTYI
FGKDGGLITFTWPNNERPSTRTDRLAVGFSSTIKDGILVRIDSAPRLGDYIMLHIEQGKV
CVTFNIGTVDISVKETTTAINDGKYHLVRFTRNGGNATLQVDNWPVNEHFPTGRQLTIFN
TQATISIGGSDRRRPYQGQLSGLYYNGLKVLNMAAEGHANVRVNGSVRLVGDVPVGRGAA
RTTSAPPEMSTTFIETTTTLSTTTTRKQRSPPTIQPTTDDIVSSAECSSDDEDLEECEPA
AAALPTAPGVVRRAPPPGASEVIRESGGTTGMVVGIVSAAALCILILLYAMYKYRNRDEG
SYQVDETRNCISNSATQSNGAAAKDKTPGGGKRPKDKDKEYYV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgctgggctcggacgacttcttctacgtgggggggagccccagcacggcggacctgccc
ggatctcccgtgagcaacaacttcatgggctgcctccgagaggtggtgtacaagaacaac
gacatccggctggagctgtcccgcctcgcccgcatcgtggaccccaagatgaagctgcag
ggcgacgtggtcttcaagtgcgagaacgtgcccaccctggaccccatcagcttcgagacg
cccgactccttcctggcgctgcccaagtggaccaccaagcgcgtgggctccatctcgttt
gacttccggacctccgaggccaacgggctgatcctcttcacgcacggcaagccccaggac
cggagggacgccaagggccagaagaacaacaaggtggacttctttgcggtggagctgctg
gacgggggtctctacctgctgctggacatgggctccggcaccatcaaggtcaaggccacc
caggccaaggtcaacgacggagcctggcaccatgtggacatccagagggacggccgctca
ggcatcatctcggtcaacagccgccgctccccgttcacggccagcggggagaacgagatc
ctggacctggagggggacctgtacctgggcgggctgcccgacagccgggcgggcctggtg
ctgcccacggagctctggaccgccatgctgaactacggctacgtgggctgcgtccgagac
ctgttcatcgacgggcgcagcaaggacatccggcgggtcgctgcggcgcagaacgccacg
ggcatcacggcgtcctgcagcaaggcggcggggcggcagtgcgacagcaaaccctgcagg
aacaacggcgcctgcaaggagggatggaaccgcttcgtctgcgactgcatcggcaccggc
ttctgggacgccacctgtgaaagagaggcgtccgtcctgtcgttcgacggcagcatgtac
atgaaggtggtgattcccgccgcggtgccgacggaggccgaggacgtgtccctgcgcttc
acgtcccagcgggcgttcggcctcctcatggccgccacgtcccgcgagtcggccgacacg
ctgcggctggagctggacggcgggcgcgtcaagctgacggtcaacctagactgtgtgagg
atacactgtaacaccagccaaggccctgaggttctgttcgccggacagaagctcaacgac
aacgagtggcactcggtgcgagtcgtccgccgcgggaaagtcttcaagctaacggtggac
gacgatgtggccgaaggtactatggcgggcgaccacacccgcctggagttcaacaacgtg
gagacgggcatcctgacggagcggcgcttcgtctcctccgccccctcctccttcatcggg
cacctgcagagcctgaagttcaacgggatgcagtacatcgacatgtgcaagaacggagac
atcgactactgcgagctgaacgcccgcttcggcctgcgcgtcatcatcgccgaccccgtg
accttcaggaccaagggcagctacctgggcctggccacgctgcaggcctacaccaccatg
cacctgttcttccagttcaagaccacctcgcccgacggcttcatcctcttcaacagcgga
gacggcaacgacttcatcgccgtggagatggtgaaggggttcgtccactacgtgttcgac
cttggcaacgggcccagcctgctgaagggcaacagcgacaacgcgctgagcgacaacaag
tggcacagcgtggtcatcacgcgggacgccgccaacacgcacacgctcaaggtcgacgcc
aagtccgtcacgcagaacgtcaacggagccaagaacctggacctcaaaggcgacctgttc
gtcggcggtctcgggcccaacatgtaccagaacctgccgaagctggtggtctcccgggag
ggcttccagggctgcctggcctcggtggacctgaacggccggctgccggacctcatcaac
gacgccctgttccgcagcggccaggtggagcgcggctgtgaaggccccagcacgacctgc
caggaggactcgtgtgccaacatgggcgtgtgcatccagcagtgggagaacttcacgtgc
gactgctccatgacgtcctactcgggaacgcactgcaacgaccctggcaccacctacatc
ttcggtaaggacggcggtctgatcaccttcacctggcccaacaacgagcggcccagcacg
cgcacggaccggctggccgtgggcttcagctccaccatcaaggacggcatcctggtccgc
atcgacagcgccccccgcctgggggactacatcatgctccacatcgaacaaggcaaagtg
tgcgtgacgttcaacatcgggacggtagacatcagcgtgaaggagacgaccacggcgata
aacgacggcaaataccacctggtgcgcttcaccaggaacgggggtaacgccaccttgcag
gtggacaactggccggtcaatgagcacttccccacaggccgccagctgaccatcttcaac
acccaggccaccatctccatcggcggcagcgaccggcgccgcccgtaccagggccagctg
tccggcctctactacaacggcctgaaggtgctcaacatggccgccgagggccacgccaac
gtccgcgtgaacggcagcgtgcggctggtgggcgacgtgcccgtcggccgcggcgcggcg
cgcaccacctcggcgccgccggagatgtccaccaccttcatcgagaccaccaccaccctc
tccaccaccaccacccgcaagcagcgctcaccgcccaccatccagcctacgacggatgac
atcgtgtcgtcggccgagtgctccagcgacgacgaggacctggaggagtgcgagcccgcc
gccgccgccctgcccaccgcgcccggcgtggtgcggcgggcgccgcccccgggggcctcg
gaggtgatccgcgagtccggcggcaccacggggatggtggtgggcatcgtgtccgccgcc
gcgctctgcatcctcatcctgctctacgccatgtacaagtaccgcaaccgggacgagggc
tcctaccaggtggacgagacgcgcaactgcatcagcaactcggccacgcagagcaacggc
gccgcggccaaggacaagacgcccggcggcggcaagagaccgaaagacaaggacaaggag
tactacgtgtag
DBGET
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