Pseudoliparis swirei (Mariana hadal snailfish): 130203094
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Entry
130203094 CDS
T09868
Name
(RefSeq) photoreceptor cilium actin regulator-like
KO
K24165
photoreceptor cilium actin regulator
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130203094
04812 Cytoskeleton proteins [BR:
pswi04812
]
130203094
Cilium and associated proteins [BR:
pswi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
130203094
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
130203094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
WH_MCM3_C
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
130203094
NCBI-ProteinID:
XP_056284973
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Position
12:complement(3196878..3201546)
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AA seq
899 aa
AA seq
DB search
MGSSLSKGKLSSKPGELGPHQPPLAEAPPDGPEKALLAEVPEGFVDSRPEEEEDKCFEED
EKENERPSLSEEHPTKEAAWSQLASDTTGGRSGEDVEDAEVNAMPREILNDLVKTDEIHT
SEKRKKSKGKRRSAKIQRISSVAQTKVDFPPHVVRAHQAAYGFLNPNISKYEALLDLLDQ
AAQTQLSLQPAMSALVFRFEEINQALEEMAEEGELMTKEHWDRVTLPSGMMGPAGMPAKP
GSDSANPAHPPPDQLRQLLQQSMEKMRQVGGSAQALGDATLEEAAGYFSSLSKVMVEKLR
AKQAAEERLTLVLARVEKAAARNSHPEDTALHSEDSGIGGENESLAGSERHRRHRGSAGS
GSAGSGSNAHRAAVDTPPGNLLSLVGYHEDDEENWEEEEEEDDEEDDDDEDDDEGDGPQR
KRSNSSPPDLSQPFIFMCANHMQGRQAAVKRPLSAVAATKHSSSSRCMNVVMELEKSQRN
LDQRIKKMAEMRGKNELAGPHYNLYRAGLRRHSVSGSSGAHKNRMSQSPGGVPALAPHPP
KHQSVRRLINTFSQGVDGRPGQSLANIPPHIRRPRRSGIIRPSDTVNGNEGEGGMVNNGN
NNNNSWPESKDGLDVDSLPPPPPEVLMDNSFQRIEGTSGNKEKSRGESALSLPSIKQKAG
VSQRLKASVRNVDVLPNRAGVKPRSERRPGSDPDPEVEKANSLFRQTRKIIQLSNAGESL
DKRDIAEFRGRRPSPLQARVGRRGGRNEFYEGETPPYSLPVTAPPVSRVCLPPSCPSVFH
RYPSPPAFGPRSGSRTSSRPSSPKTVTREMDIDTEEIVPSVSFRDARSVFCRRDSENSQT
ALAKPWGEAYRGRLLTKGVDGSTRRTQSEQRPGTSRSEFSKDGGSASTPVEGSEPLTTE
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgggcagctctctatctaaaggaaagttatcctcaaagccaggagaactcggacctcac
cagcctccgctggccgaagcgccgccagacggacctgaaaaggctctgctggctgaagta
cccgaaggttttgtggattctagacctgaagaggaggaggacaaatgctttgaggaggat
gagaaagaaaatgaacgaccctcactctctgaggaacatcctacaaaagaggctgcatgg
tctcagttggcctccgacacaacgggaggccgaagcggtgaagacgttgaagacgcggag
gtcaatgcgatgccccgggaaatcctcaacgaccttgtgaaaacagatgagatccatacg
tctgagaagagaaagaaaagtaaaggcaagagaaggtctgccaagatccagaggatatct
tctgttgctcagacaaaggtggacttcccgccgcacgtggtgagggcgcaccaggccgcc
tacggctttctcaaccccaacatctcaaagtacgaagctctgttggacctgctggaccag
gccgcgcagacgcagctgtccctccagcccgccatgtccgctctggtcttccgcttcgag
gagatcaaccaggctctcgaggagatggccgaggagggcgagctcatgacgaaggagcat
tgggaccgcgtgaccttgccgtctgggatgatgggcccagccggtatgccagctaaaccc
gggagtgactcggctaaccccgctcacccgccccccgatcagttacggcaactgctccag
cagtcgatggagaaaatgagacaggtgggcgggtccgcgcaggcgctgggcgacgccacc
ctcgaggaggccgcggggtacttctcttctctttcgaaagtgatggtggagaagctgcgg
gccaagcaggcggcggaggagaggctgactctggtgctggcgcgggtggagaaggccgct
gcgagaaactctcaccccgaggatacggcgctgcacagcgaggacagcggcatcggcgga
gaaaacgagagtctggcggggtcggagaggcaccgacgccaccgcgggagcgccggatcg
gggagcgccggatcgggaagcaacgcgcatcgcgccgcagttgatacgccgcccggtaat
ttactcagccttgtaggctaccatgaagatgatgaagagaactgggaggaggaggaggaa
gaggacgatgaggaggacgacgatgatgaggatgatgatgaaggtgacgggcctcaaagg
aagaggtcgaactcttccccaccggacctcagtcagccttttatcttcatgtgtgccaac
cacatgcagggtcggcaggcggcagtgaagagacccctgagcgccgtcgccgcgaccaaa
cactcttcatccagcaggtgtatgaacgttgtgatggagctagaaaagagccagaggaac
ttggatcaacgaattaaaaagatggcggaaatgcgaggaaagaacgagttagcggggcct
cattacaacctgtatagagctggtctacggcggcattcggtgagtggatcgtcgggtgca
cacaaaaaccgaatgagccaatcacctggtggcgtaccggcgttggcaccccatcccccc
aagcaccagtcggtcagaaggctgattaacacctttagccaaggggtggatgggagacca
gggcagagcctcgctaatatcccacctcacatcaggaggcccagaagaagtgggatcatt
cggccctctgacacagtaaatggcaatgagggtgagggggggatggtgaacaatggcaat
aacaacaacaacagctggcccgaaagcaaggatggcctcgacgtcgacagcctaccgccg
ccgcccccggaggttctgatggacaactccttccagagaatcgagggcacgtcgggaaac
aaggaaaagtcgcggggggaatcggctctgagtctgccgtccataaaacaaaaggccgga
gtttcccagcgtctcaaagcctccgtgcggaacgtggacgtgctgccaaatcgagccggc
gtgaagccgagatccgagcggcgaccgggaagtgatccggatccggaagtagagaaggct
aacagtctcttccggcagacgcgtaagatcatccaactgagcaatgcgggagaatctctt
gacaagagagacatcgcagaattcagaggcaggagaccgtcgccccttcaagccagagtc
ggtcgcagaggtgggaggaatgaattctacgagggcgagacgcccccttacagcctgccg
gtgacggcgccgcctgtctccagagtctgcctgccgccctcttgtccctctgtgttccac
agatatccgagcccgccggcgttcggacctcgatccggctcccggacctcgtcccggccg
agttctccgaagacggtgacgcgcgaaatggacatcgacaccgaagagatcgttccgtcc
gtgtcttttcgcgacgcccgctcagtgttctgccgacgagactcggaaaactctcaaacc
gcgcttgccaagccgtggggcgaggcctaccggggcaggcttctcacgaaaggggtagac
ggctcgacccgccgcacccaatcagaacagaggcccggcacttcgcgttcagagttctcc
aaagatggcggttcagcctctaccccggttgagggcagtgagcctctcaccacagaataa
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