Pseudoliparis swirei (Mariana hadal snailfish): 130203122
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Entry
130203122 CDS
T09868
Symbol
ccnt2a
Name
(RefSeq) cyclin-T2a
KO
K15188
cyclin T
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130203122 (ccnt2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130203122 (ccnt2a)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
130203122 (ccnt2a)
Brd4/P-TEFb complex
130203122 (ccnt2a)
7SK RNP complex
130203122 (ccnt2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
130203122
NCBI-ProteinID:
XP_056284976
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All DBs
Position
2:complement(20538583..20547897)
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AA seq
680 aa
AA seq
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MAACRGSSSKWFFTREQLETTPSRRCGVEPDRELSYRQQAANLVQDMGQRLNVSQLTINT
AIVYMHRFYMHHSFTKFHRNIMSPTALFLAAKVEEQPRKLEHVIKVAHACLNPQEPPLDT
KSNAYLQQAQELVILESIVLQTLGFEITIDHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQYKPTVISCVCIHLACKWSNWEIPVSTDGKHWWEYVDNSVTLELLDELTHEF
LQILEKTPSRLKRIRNWRATQAAKKPKGDSSQLNDNPFPGPSMLQDHGDLPLAANSSFSK
ASGAFGVAMPDQSGAASLDALAGPYNPASHSEWPLVNQSQAGYPSACIKQEPLSIPLQEP
AYRTEKTLDFLPVKQEQKGAGGSGAGKHPPPPPPPQPSLAPKLSLDKYREKHAAELAVSG
QKRSQEQHGGGLDFDNRGDMASSSSSTYASSSSASQADHRKHSQPHQASHGVPADSPMKI
KVPSSSTSGQERRHHGDKRDKGSLKLRLAVPGSGDGSQPDRSGQPIKDELKMKIKVSSSE
RHSSSDEGVANNLKSKHSSPLVGKEKQHRGADHGLQRHHKHSHPHTHSGNGGAGPLRGPP
GPLGAEGTGLPPPGSASLLSSRKRVYPEGHNHHASSSLSTSCSKVNKISKGGTGAAGGLR
TSQQYPPPSESPHEVGEQRH
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtgccggggatcctcgtcgaaatggtttttcacccgggagcagctcgaaacc
acgccgtcccgccgctgtggagtagaaccggaccgggagctctcttaccgacaacaagcg
gcgaacctggtccaagatatgggtcagagactcaacgtctctcaattaacaattaataca
gccattgtttacatgcatagattttatatgcaccactctttcaccaaattccataggaat
ataatgtctccaaccgccttgttcttggccgcgaaagtggaagagcaacctcggaaactc
gaacatgtgatcaaagtggcacacgcttgcctaaatcctcaagaaccgcctctagacacg
aagagtaatgcatacctccagcaagctcaagagctggtgatacttgaatccatagtgctg
cagaccctgggctttgaaattactattgatcacccacacactgatgtggtgaaatgttcc
cagctagtgcgagcaagcaaggatctggcacagacttcctatttcatggcgaccaacagt
ctacacctcaccaccttctgcctccagtacaagcccacagtgatctcctgtgtgtgcatc
cacctggcatgcaagtggtccaactgggagatcccagtttccactgatgggaaacactgg
tgggagtacgtggacaactctgttaccctcgagctgctggacgagttgacccacgagttc
ctgcagattctggagaagacgcccagccggttaaagaggatacgcaactggagggcaaca
caagctgccaaaaagcccaaaggtgacagctctcagttgaacgacaacccgtttcccggg
ccttccatgctccaggatcacggcgatttgccgctcgccgccaactcgagcttctccaaa
gcgagcggcgccttcggcgttgccatgcccgaccagtccggagccgcgtccctggacgcc
ttggccgggccgtacaacccggccagccacagcgagtggccgctggtcaaccagagccaa
gccggttacccgtctgcctgtataaagcaggagcccctcagcatccctctccaagagccg
gcgtacagaactgagaaaacgctcgacttcctccctgtcaaacaggaacaaaaaggcgcc
ggcggaagcggagcgggcaagcatcctccgcccccgccgccgccgcaaccgtctctggct
ccaaagctgtcgttggacaaataccgagagaaacacgccgcggagctggccgtctctggg
cagaaacgcagccaggaacagcatggaggaggactggatttcgataacaggggcgatatg
gcatcttcctcctcttctacctatgcatcctcctcttctgcgagccaagcggaccacagg
aagcattcgcagccccaccaagcgtcccacggggtccccgccgactccccgatgaaaatc
aaggttccctcctcctcgacttcagggcaagagagacgccaccacggcgacaagcgggac
aaaggctcgctgaagctccgcctggccgtccccggctccggcgacggctcccagccggac
cgaagcggacagccgatcaaagacgagctcaagatgaagatcaaagtctcgtcgtccgag
cgccacagctcgtcggacgaaggcgtggccaacaacctcaagagtaaacattccagcccc
ctggtgggcaaggagaagcaacaccgcggcgccgaccacggcctccagcgccaccacaag
cacagtcacccgcacacgcacagcgggaacggcggggcgggcccgctccgggggccgccg
ggaccgctcggcgcggaagggaccgggctccctccgcccggctccgcctccttgttgtcg
tcgcgcaaaagggtgtacccggagggccacaaccaccacgcttcctcctcgctctccact
tcatgctccaaagtgaacaaaatctccaagggtggcactggtgctgcaggtgggctgcgg
acctctcagcagtaccctcctcctagcgaatcgccacatgaagtgggagagcagagacac
tga
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