Pseudoliparis swirei (Mariana hadal snailfish): 130203133
Help
Entry
130203133 CDS
T09868
Name
(RefSeq) alsin-like isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130203133
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
130203133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
PH
RhoGEF
PH_16
SOS1_NGEF_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
130203133
NCBI-ProteinID:
XP_056284994
LinkDB
All DBs
Position
2:complement(14690541..14712731)
Genome browser
AA seq
1621 aa
AA seq
DB search
MENREESPADDQAPTPSERGVLHIWQSAGPSSQLCPERVLLSRPVLQASLGEHHGLLLMQ
GGEVYSFGELSWRGLSIPASAPLLEVSLLGTTVVRVAAGGFHCGALSEQGNVYMWGENTA
GQCGLTERGTDTSITVSEPSPVTVVDSDVVPPAVVRVVYLALGREHSLALSAQNELWAWG
SGCQLGLVTNTFPVWRPQKVEHLAGRHVLQVACGAYHSLALVRSLPQQNTQNPSEKTQRG
RSPHYSVTEREESFAADTGHYCPLGVELTEVMTDETSSRRRDLRRRLQPGERKNIPVRPP
QPLNETDGSPKSHTLSDWRTNKNPAFPDEAELQNLLQKLSSHSLEMRQSTGPGDTDSLSS
YTSDDSCVSSSPSTDLLTSSYKEDSPIKSQTNNEVAYSSSSVSSEDVRLCLETEKQALQG
PYSTSLTNINQKGKAAGHRRRSLPGIPTRGSPGQQGYCACSPSSSCRTQAAAPEDAGEGL
PSLETEVWSWGRGSEGQLGHGDQLARLQPLCIKGLTGEEVIKVAAGSHHSLALTAHCQVY
SWGSNMCGQLGHVNSPVTVPQQTKLSDDLRVWDVTAGQSHSLFLADGDCVQPVLLYCGQQ
QEPRSMQRERSCQTQRSPNRAQSYTVRPNLLPFCIEMGYISGVCSGGQSCAVLADQNIMG
FISAIHELASRERQFYCWLSSVKTLLLTPLQNRESACPSLGEPCTHLFFSLCESFVRLSF
LIGRQSTSLSYFLHDVQGCDVTSLPLLTHTKHFLEIYKEYCSSVGNFQVMGGFRSLHKLS
LECLGSQETVLAQLCVSDQSVSGNVDLVSLMYWPLQQLHQYSRVLLKLAACYDVLTTEYQ
SLHQGCNQYDSLSVSLLRRKKEAEATFLFWSIHSGKTTEVLRLPQRRVVCESSNRSLTLQ
NAGRFSNHWFILFNDTLVHTQGAIPSQSLFAMHHIYPLTSLWVKPVTEDSSGLYAIKVTC
PEESFTLVASTPQEKNKWLRSLNQAVDQVLGGPGQGSSPGLTAMTRTASYKFTGEGRFKD
AQYTGGWLAGRVHGRGTMKWPDGRTYNGNFKNGQEDGYGECVLPDKVLNKPDNYHGLWRD
GKIHGFGKYKYASGEVYEGCFSDGQRHGYGMLNSGNLAKKSASVFIGQWIHDKKTGYGVH
DDITRGEKYMGLWSDEQRHGNAVVVTQCGLYYEGTFRDNKMCGPGLLVSDDDTALHGEFS
DDWTVDGKGILSLANGDYLEGVFSGEWTAGLKVVGTYIKPSVDEPENKERNSLLRVGQHA
VPAGQRWLCVFDECWSRLGCDSAGRGERAAAWDNIAVTITTARRQSPALSRSQSKVLECL
EFIPQHEEPVTTANYANIRRYLIKACETPHHPLGWLVETLVTVYRMTYVGVGSNRRLLRQ
AVQELLAYLTHFFCIVRFLFPGLPDDGGVIPEPSASPSKSKQNANMAEQVGVMVVSCSSL
LLPQLLPRLYPPLFTLYCLQQEQAEAEYWQRILQQNKQPDQSLLNFLGVQEKFWPVWVSI
LGEKKQIVSSSKDACFVSAVETLQQISTAFTPSDKLLVIQKTFEELTQEVKSMLDDNFVW
CMDDLLPLFIYVVLRARIRNLGAEVSLIDDLMDPNIQHGEMGLMFTTLQACYSHILQESA
M
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccgagaggaaagccctgcagatgaccaggcgccaacaccttcagagcgagga
gtgctccacatctggcagtcagcgggtcccagttcgcagctctgtccagagagagtgctg
ctctccaggcctgtccttcaggccagcctgggagaacaccatggactcctgctgatgcag
ggtggagaagtctattcctttggagagctgtcgtggaggggtttgagtattccagcgtct
gctccgttgctggaggtctctctgctggggacgaccgtggtccgtgtggctgctggtggt
ttccactgcggagcgctaagcgagcagggtaacgtctacatgtggggggagaacactgca
ggacagtgtgggctcacggaaaggggcacagacacaagcatcacagtttcagagccttca
ccggtcactgtggtggacagtgatgtcgttcctccagcagtcgttcgagttgtgtatcta
gctcttggacgggagcacagcctggctctgtcggcccagaacgagctctgggcgtgggga
agcggctgccaacttggcctggtcaccaacaccttccctgtgtggagaccacagaaggtg
gagcacttggcaggcagacatgtacttcaggtggcttgtggtgcctaccacagcctggcc
ctggtccgcagtttgcctcaacagaatacccagaatccttctgagaagacacagcggggt
cggtcacctcactattcagtgacagaaagggaggagtcgtttgcagctgatactggtcac
tactgtccgcttggagtggagctgactgaagtcatgacagatgagacctcttcaagaaga
agagaccttagacgaagattacaacctggggaaaggaagaatattccagttaggccccct
cagcccctcaatgaaactgatggcagccccaagtctcacacactgtcagactggagaacc
aataagaaccctgccttccctgacgaagcagaacttcagaacctcctccagaaactctcc
agtcactcattggagatgcgccagtccaccgggcctggagataccgactcactgagcagt
tacacttcagatgacagctgtgtttcctcaagtccttccacggatctgttgacttccagt
tacaaagaggattcaccaattaaaagtcaaaccaacaatgaagtggcgtactcctcctcg
tctgtgtcttcggaagacgttcgtctttgtctggagacggagaagcaggcactgcaggga
ccatatagcaccagtctcacaaatataaatcagaaggggaaagcagcaggacataggaga
cgctctctgccaggaatacccacccgtgggtctccagggcaacaggggtattgcgcctgc
agtccgtcctcgtcctgtcggacgcaggctgcagcaccggaggacgcgggagaagggctg
ccgtctctggagacagaagtgtggagctggggccgcgggtctgaggggcaactgggacat
ggggatcagctcgccagactccagcctctgtgcatcaagggtttgaccggcgaggaggtg
atcaaagtcgccgcaggttcacaccattcactggctctcacagctcactgccaggtgtac
tcgtggggaagcaacatgtgtggacagctcggacacgtcaacagtcctgtcactgtacct
caacagacaaagctgtctgatgatcttcgggtttgggacgtgaccgccggtcagagccat
tccctcttcctggctgatggagactgtgtccagccggtcctgttgtactgcggccagcag
caagagccaaggtcaatgcagagagagaggtcatgccaaactcaaaggtcacccaacaga
gcacagagttatacagtcagacccaacctgctgcccttctgcatagagatgggctatatt
agcggtgtttgcagcggaggtcagagctgtgcggtgttggcagaccagaacatcatgggt
tttatctcagcgatccatgagctggcctccagagagagacaattttactgctggttgagc
agcgtgaagacgctcctcctcacaccactacagaacagagagagcgcgtgtccgtcgtta
ggggagccatgcactcatctcttcttctctctctgtgagagttttgttcgtctgagcttc
ctgattggtcgacagtccacgtcactcagctacttcctgcatgatgtgcagggttgtgat
gtcacttcccttcccttgctgacgcacactaagcactttctggagatttataaagagtat
tgttcttcagtcggtaacttccaggtgatgggtggattccgatctctccataaactctca
cttgagtgtttaggctctcaggagaccgtgctcgctcagctgtgtgtatcagaccagtcc
gtcagtggtaatgttgatctggtttccttgatgtactggcctctgcagcagctccaccag
tacagccgagtcctgctcaaactggcagcatgttacgatgtgttaactacagagtaccag
tccctccatcagggctgtaatcagtatgactccctgtctgtgtccctgttgaggaggaag
aaggaggctgaagccaccttcctcttctggagtatccactctggaaaaactactgaggtc
ctgcgtctcccgcagcgtcgtgtggtgtgtgaaagcagcaacagatctctgactctgcag
aacgccgggcggttttccaaccactggttcatactgttcaatgacacactggtgcacacc
cagggtgccattccctctcagagccttttcgccatgcatcacatctaccctctgaccagt
ctgtgggtgaaaccagtgacagaagacagcagcggactctatgccatcaaagtaacatgc
ccagaggagagcttcaccctggtggcctcgacaccacaagagaagaacaagtggctacgg
tctcttaaccaggcggtggatcaggtgctgggaggtccaggtcagggatcgtcgccgggg
ttgacagcaatgactcgcacggcctcctacaagttcactggagagggccggtttaaagat
gcccagtacaccgggggctggctggcaggacgagttcatggcagaggcaccatgaagtgg
ccagatggacggacctacaatgggaactttaagaacggacaggaggatggctatggagag
tgtgtcctgcctgacaaagtgctgaataagccagacaactaccatggactctggagagat
ggcaagatccatggtttcggcaagtacaagtatgccagtggcgaggtgtatgagggctgt
ttctcggatgggcagaggcacggttatggcatgctgaactccggcaatctggccaaaaag
tctgccagcgttttcattggccagtggatccatgacaagaagacgggatacggagtccac
gatgacatcaccagaggtgagaagtacatgggactgtggtcggacgagcagcggcatggc
aacgctgttgttgtcacccagtgcggtttgtactatgaagggaccttcagagacaacaag
atgtgtggcccaggtctgttggtgtcagatgatgacacagcgttacatggagagttttct
gatgactggactgtcgacggaaagggtattttgtccctggctaacggcgactacttggag
ggcgtgttcagcggagagtggaccgcaggactgaaagtagttggaacgtacatcaaacca
tccgtggatgaaccggaaaacaaagagagaaacagcctgctccgggtgggtcagcacgcg
gtgcctgcaggtcagaggtggctctgtgtgtttgacgagtgttggagtcggcttggctgt
gattctgctgggagaggagagagggctgcagcctgggacaacatcgctgtaaccataaca
actgcaagacgacaaagcccagctctcagtaggtctcagagtaaagtattggagtgtttg
gagttcattcctcagcacgaagaaccggtgaccacggcaaactacgccaacatccgtaga
tacctcatcaaggcgtgtgagacccctcaccaccctctgggctggctggtggagacattg
gtgacggtctacaggatgacctatgtcggtgtgggatccaaccgccggctgctcaggcag
gccgtccaggagcttctggcctacctcactcatttcttctgcatcgtcaggtttctgttt
ccagggctaccagatgatggaggcgtcatcccagaaccgtctgcctctccatctaaaagc
aaacagaacgctaacatggcagagcaagtcggtgttatggtggtgagctgctcctccctg
ctcctccctcagctgctccctcgactctaccctcctctctttaccctgtactgcctgcag
caggagcaggcggaggccgagtactggcagcgcatcctccaacaaaacaaacagcccgac
cagtcactgctcaacttcctgggagtgcaggagaagttctggccagtgtgggtttcaatt
ctgggagagaaaaaacagattgtgtccagcagtaaagatgcctgctttgtttctgctgta
gagacactccaacaaatcagcaccgccttcactccatcagacaaactcctcgtcattcag
aagacgtttgaggaattgacccaggaagtaaaatctatgctagatgacaacttcgtgtgg
tgcatggatgaccttctccctctcttcatctatgtggtgctcagagcaaggatcaggaac
ctgggagctgaggtcagtctgatcgacgatttaatggaccccaacattcagcacggagag
atgggcctgatgttcaccacactgcaggcctgctactcccacatcctgcaggagtctgct
atgtag
DBGET
integrated database retrieval system
