Pseudoliparis swirei (Mariana hadal snailfish): 130203139
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Entry
130203139 CDS
T09868
Symbol
zranb1a
Name
(RefSeq) ubiquitin thioesterase ZRANB1
KO
K11862
ubiquitin thioesterase ZRANB1 [EC:
3.4.19.12
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130203139 (zranb1a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130203139 (zranb1a)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130203139 (zranb1a)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C64
130203139 (zranb1a)
Ubiquitin system [BR:
pswi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
130203139 (zranb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AnkUBD
OTU
Zn_ribbon_RanBP
Ank_2
Motif
Other DBs
NCBI-GeneID:
130203139
NCBI-ProteinID:
XP_056285006
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All DBs
Position
13:6472823..6486861
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AA seq
714 aa
AA seq
DB search
MTEQKVKWACDYCTYENWLSAVKCTMCRAQRLRGPIITEEPYKNRPDLDSSLEWDPPRTE
SGDNLLICPDSSARPRVRSAGMAEIANKWSCQICTYLNWPRALRCTQCLCQRSRTSSPTE
SPQTSSSNAGCRPSLPSPVDTCEEYNDRNRLNTHPPHWACTVCNYQNWPTTTKCVVCDRP
KPNNQEAIELAGSAEPTPMINEQDRARWRGGCSGGRGQRRSPPMPKREDNVKMDFQRIEL
AAGAMSSKEEQEVDFKKLKQIRNRMRKTDWLFLNACAGVVEGDLAAIEAYKSSGGDIARQ
LTADEVQLLNRSSAFDEGFTLVHLAIRFQRQDMLAILLTEVNQQAAKCIPSMVCPELTEQ
IRREIAASLHQRKGDFACYFLTDPVTFTLPADIEDLPPAVQEKLFDDVLDRDVQKELEED
SPVINWSLELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKTLHDSLHDCS
HWFYTRWKEWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILR
RPIIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMEN
DGNYDNRGAGANLNTDDDVTVTFLPLVDSERKLLHIHFLSAQEMGNEEQQEKLLREWLDC
CVTEGGMLAAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCASLSDGEEEEDEDE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgacggagcagaaggtgaagtgggcctgtgactactgcacctatgagaactggctgtct
gcggtcaagtgcactatgtgccgtgcacagaggttgaggggtcccatcatcacagaggaa
ccttacaagaaccgccctgatctggacagcagtctggagtgggaccctcccagaactgag
agtggcgacaacctcctcatctgccctgactccagcgctcggccaagagtccggtcagcc
ggcatggctgagattgccaacaagtggtcctgccagatctgcacctacctgaactggccc
cgagcgctccgctgcacacagtgcctgtgtcagcgctccaggactagcagtcccacagag
tccccccagacttcaagctccaatgccggctgtcgtccttctctgccctctcccgtggat
acctgtgaggagtacaatgacagaaacagactcaacacgcatccgccgcactgggcatgc
accgtttgcaactaccagaactggcccacaacgacaaagtgcgtggtttgtgaccgcccc
aagcccaataaccaggaggccatagagctggccgggtctgcggagccaacaccaatgata
aatgaacaggacagggcccggtggaggggcggttgcagtgggggccggggccaaaggagg
tcccctccaatgcccaagagggaagacaatgtcaaaatggacttccagaggatcgagctt
gcagctggagccatgagcagcaaagaggagcaagaggtcgacttcaagaagctcaagcag
attagaaatcgaatgaggaaaacagactggctgttcctcaatgcatgtgctggtgtggtg
gagggagacctggctgcaatcgaagcctacaagtcgtccggcggggacatcgcccggcag
ctcaccgccgacgaggtgcagctcctcaaccggtcctctgcgtttgatgaaggcttcact
ctggtccatctggccatccgcttccagaggcaggacatgctcgccatcctgctcacagag
gtgaaccagcaggcggctaagtgcatcccgtccatggtttgccccgagctgacggagcag
atccgcagggagatcgcagcttcactacatcaacgcaagggagacttcgcctgctacttc
ctcaccgacccggtcaccttcaccctgcctgcagacatagaggacctgccgcctgcggtc
caagagaagctgttcgatgacgtgttggatcgagatgtgcagaaagagctggaggaggac
tctcccgtcatcaactggtctctggagctgggcacgcgcttggacagccgcctgtacgcc
ctgtggaaccgcaccgccggggactgcctgctggactctgtcctgcaggccacctggggc
atctacgacaaggactctgttctgcgcaagaccctccacgacagcctgcacgactgctcc
cattggttctacacccgctggaaggagtgggagtcgtggtactctcagagtttcgggctg
cacttctccctgagagaggagcagtggcaggaggactgggccttcatcctgtctctggcc
agccagcccggggccagcctggagcagacccacatttttgttctcgcacacatcctccgc
agaccgatcatcgtctacggagtgaaatactacaaaagtttccgcggggagacgttagga
tacactcgttttcaaggcgtgtacctgcctctgttgtgggagcagagcttctgctggaag
agccccatcgccctcggctacacgcggggccacttctcggccctggtggccatggagaac
gacggcaactacgacaaccgcggcgccggcgccaacctcaacaccgacgacgacgtcacg
gtcacgttcttgcctctggtggacagcgagaggaagttgctgcacatccacttcctgtct
gcgcaagagatgggcaacgaggagcagcaggagaagctgctccgcgagtggctggactgc
tgcgtgacggagggcggcatgctggcggcgatgcagaagagctcccggcgccgcaaccac
cccctcgtcacgcagatggtggagaagtggctggaccggtaccgccagatccgcccctgc
gcctctctgtccgacggcgaggaagaggaggacgaagacgagtga
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