Pseudoliparis swirei (Mariana hadal snailfish): 130203142
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Entry
130203142 CDS
T09868
Symbol
llgl2
Name
(RefSeq) LLGL scribble cell polarity complex component 2 isoform X1
KO
K06094
lethal(2) giant larvae protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130203142 (llgl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130203142 (llgl2)
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130203142 (llgl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
Lgl_C
Motif
Other DBs
NCBI-GeneID:
130203142
NCBI-ProteinID:
XP_056285011
LinkDB
All DBs
Position
13:complement(13239883..13266300)
Genome browser
AA seq
1037 aa
AA seq
DB search
MKRFRRHGQESQRDRLKQELFQFNKTVEHGFPHQPSALGYSPSLQLLAIGTRSGAIKLYG
APGVEFMGLHDENAAVTQVHFLPHQVELVTLLDDNSLHMWTLKAHKGLSELLEIGRFTLT
GPPGAPPSVTRVTAVLAHSSGELLLLGTEGGHVFIVEVPGFRELEERNISLDQVASSVPD
DYIGRRNLEHVETLQENPVDPNLIVIGYGRGLMVIWNLEKQKAVQHIPATQQLESMWWTE
DGGHLLSSHSDGSYCRWMAGGEDVNEEEKSDIPYGHFPCKAISKIIQLPTETGPPFLLFS
GGMPRASYGDRHCITVIHSKIHVALDFTSRIIDFFTIRGGPQHTGDPSALVVLVEEELVV
IDLQTEGWPVIQTPYLVPLHSSAITCSHHVSAIPLKLWERVLAAGDLQSTHYSKKPWPIT
GGQNLAPDPPQRDLLLTGHEDGTVRFWDASGVCLYPMYKLSTSGVFHTDTDPNDNMNQGT
EGEWPPFRKVGCFDPYSDDPRLGIQKIHLCKYSGYLTVAGTAGQILVLELNDEAAEQTVE
AKVVDLLQGQEGFRWKGHTQLDVRQEPVLFPPGFQPFALVQCQPPAVVTALTLHSEWKLV
AFGTSHGFGLYDYQQKNNVLVRCTLNPSDQLAMEGPLSRVKSIKKSLRQSFRRIRRSRVS
LRKHHVNNAAKLQDANARLEAELAEMELAPVQRKIEARSSDDSFTGLVRTIYFADSFLSD
SSHNTPSLWAGTNGGCVFAYMLRLPAVERRADEPVTAAPGKNPQGILGGGGGEMSTSSSR
CNVLLPPLVPAKEIQLMHRAPVVGIVVLDGHGAPLPEPLEVAHDLARSPDMQGSHHLVVI
SEEQFKVFTLPKVSAKTKLKLTAVDGSRVRRVGVAWFGSSRSEDYGESGLVVLTNQGDVH
VVSLPGVKMQVHYPCVRREDVSGIASCVFTKHGQGFYLISPSEFERFSVSARYLVEPRCL
VEVPVRTGAATQRRPPPDGVPPAHRLPSADGEAAESAARRVMEHALLNDEKVLQEIQESL
EGEQTSLLENNVKNAVA
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggttcaggagacacggccaggagtcccagagggatcgactcaagcaggagctc
ttccagttcaacaagaccgtggagcatgggttcccccaccagcccagcgctctgggctac
agcccctccctccagctgctggccatcggcactcgctccggggccatcaaactatacgga
gctcccggtgtcgagttcatgggcctccatgacgagaacgctgccgtgactcaagtgcac
ttcctcccccaccaggtagaactggtgaccctgctggatgacaacagtctgcacatgtgg
actttaaaagcccacaagggactctctgaactcctggagataggacgcttcaccctcact
ggaccacctggtgcccctcccagtgtgaccagagtgaccgccgtgctggctcactcctcg
ggggagctgctgctgctgggcaccgaaggaggacacgtcttcatcgtggaggtcccgggc
ttcagggagctggaagagaggaacatcagtctggaccaagtggccagcagcgtgccggac
gactacatcggccggcggaacctggaacacgtagagaccttgcaggagaacccggtggat
cccaacctgatcgtgatcggctacggccgaggcctcatggtcatctggaacctggagaag
caaaaggccgtccagcacatccccgccacgcagcaactggagagcatgtggtggacagaa
gacggaggccaccttctcagctcgcacagcgatgggagctactgccgctggatggccggc
ggcgaggatgtgaacgaggaggagaagtcggacattccttatggacatttcccctgcaag
gccatttctaaaataattcagctaccgactgaaacggggcctccgtttctgctgttcagc
ggcggcatgcccagggccagctacggggaccgacactgcatcacggtgatccacagtaaa
atacacgtggctctggacttcacctcccggatcatcgacttctttaccatcaggggcgga
ccgcagcacacgggagaccccagtgcgctggtggtgctggtggaggaggagctggtggtg
atcgacctgcagacggagggctggcccgtcatccagacgccgtacctggttcccctccac
agctccgccatcacctgctcccaccacgtctccgccatccccctcaagctgtgggagcgg
gtcctcgccgccggagacctgcagagcacgcactactccaaaaagccgtggccaataacg
ggaggccagaacctggcccccgaccccccacagagagacctgctgctcacagggcacgaa
gacgggacggtgcggttctgggacgcatccggagtctgtctgtaccccatgtacaagtta
agcacatctggagtgttccacacggacaccgaccccaatgacaacatgaaccagggcacc
gaaggagagtggccaccattcagaaaggtcggctgttttgacccctacagcgacgacccc
cggctcggcatccagaagatccacctctgcaaatacagcggctacctgacggtggctggc
acggcgggacagatcctggtgctggagctgaacgacgaggcggcggagcagacggtggag
gccaaagttgtggatctgctgcagggccaggagggcttccgctggaagggccacactcag
ctggacgtgcgacaggagccggtgctgttcccgccgggcttccagcccttcgctctggtc
cagtgccagccccccgccgtggtcaccgccctcacgctgcactctgagtggaagctggtg
gccttcggcacgagccacggcttcggcctctacgactaccagcagaagaacaacgtcctc
gtccggtgcaccttgaaccccagtgaccagctggccatggagggccctctgtccagggtg
aagagcatcaagaagtccctccggcagtccttcaggagaatccggcgcagccgcgtctcg
ctaaggaaacatcacgtcaacaacgccgccaagctccaggacgccaacgctcgtctggag
gcggagcttgcggagatggagctggctccggtccagaggaagatcgaggcgcgctcctcg
gacgactcgttcaccggcctcgtgcggaccatctacttcgccgacagcttcctctccgac
agttcacacaacacgccctccctctgggcggggaccaatggcggctgcgtgtttgcgtac
atgctccgcctccccgctgtggagcgccgagcggacgaaccggtgacagctgcgccgggt
aaaaacccccagggaattttggggggtggagggggagagatgtcgacttcttcctcgcgt
tgtaacgttcttcttcctccccttgttccagccaaggagatccagctcatgcaccgggcc
cccgtcgttggcattgtggtgctggacggccacggggcccctctgcccgagccgctcgag
gtggcccacgacctggcccgctcccccgacatgcagggctcacaccacctggtggtcata
tcggaggagcagtttaaggtcttcacgctgccgaaggtgagcgccaagacgaagctgaag
ctgacggccgtggacggctctcgggtgcggcgggtgggcgtggcctggttcggcagcagc
cggtcggaggactacggcgagagcggcctggtggtgctcaccaaccagggcgacgtgcac
gtggtgtcgctgcccggcgtcaagatgcaggtgcactacccctgtgtccgcagggaggac
gtcagcggcatcgcctcctgtgtgttcaccaagcacggccagggcttctacctgatctct
ccatcggagttcgagcggttctccgtgtcggcccggtacctggtggagccgcgctgcctg
gtggaggttcccgttcgtaccggcgccgccacccagcgccggccaccgcccgacggagtc
ccacccgctcacagactcccctcagccgacggcgaggctgcagaaagtgccgctagacgt
gttatggagcatgctctgctgaatgacgagaaagtgcttcaggagatccaggagtcgcta
gaaggagagcagacgtcgctcctggagaataatgtgaagaacgctgtagcctag
DBGET
integrated database retrieval system
