Pseudoliparis swirei (Mariana hadal snailfish): 130203172
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Entry
130203172 CDS
T09868
Name
(RefSeq) glutamate decarboxylase 1-like isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00250
Alanine, aspartate and glutamate metabolism
pswi00410
beta-Alanine metabolism
pswi00430
Taurine and hypotaurine metabolism
pswi00650
Butanoate metabolism
pswi01100
Metabolic pathways
Module
pswi_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
130203172
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
130203172
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
130203172
00430 Taurine and hypotaurine metabolism
130203172
Enzymes [BR:
pswi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
130203172
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Motif
Other DBs
NCBI-GeneID:
130203172
NCBI-ProteinID:
XP_056285074
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Position
2:complement(10177567..10187924)
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AA seq
591 aa
AA seq
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MAASAPSSGGEPDPNSTNLRPPGSSYDAWCGVAHGCTRTLGMKICGFLQKNNSLEERSRF
VSSLKERAARNLLTCDNTGGGDAHYRRTDTDFSNLFARDLLPAKNGEEPTMQFLLEVVEI
LTNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRTG
HPRFFNQLSTGLDIVGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREMIGWPDGE
GDGIFSPGGAISNMYSVMIARYKFFPEVKTKGMAAAPRLVLFTSEHSHYSIKKASAALGF
GTENLILLNTDKRGRVIPADLEAKVIEAKQKGYVPMFVNATAGTTVYGAFDPINEIADIC
EKYNMWLHVDGAWGGGLLMSRKHRHKLNGVERANSVTWNPHKMMGVPLQCSAVLVREWGL
LQGCNSMCAGYLFQTDKQYDVTYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFEQHIDKC
LDLSAHLYNIVKNREGFELVFDGEPQHTNVCFWYIPPSVRGLPDGDERRERLHKVAPKIK
ALMMESGTTMVGYQPQGNKVNFFRMVISNPAATMSDIDFLIEEIEQLGHDL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtctgcaccctcctctggcggagaaccagatcccaactcgacaaatttacga
ccaccgggctcaagctatgatgcctggtgtggagtggcccatggatgtactaggacattg
ggaatgaagatatgtgggtttttgcagaagaacaacagtctggaggagaggagccgcttc
gtgagctccttgaaggagcgcgcagcccggaacctgctgacctgcgataacaccggagga
ggagacgcgcactacaggcgcaccgacaccgacttctccaacctgttcgccagagatctg
ctgcccgccaaaaatggagaagagccgacaatgcagttcttactggaggttgtggaaatc
ctcaccaactacgtgcggaagacctttgaccgatcaaccaaggtcctggacttccaccac
ccccaccagttgctggagggcatggagggcttcaacctggagctctccgaccagcccgag
tctctggagcagatcctggtggactgccgggacaccttgaagtatggagtgagaacaggt
caccccaggttctttaaccagctgtccactggactagacattgttgggttggcaggagag
tggcttacctctacagccaacaccaatatgttcacctatgagatcgcccccgtctttgtg
ctcatggagcagctgacgctgaagaagatgagagagatgatcggctggcctgatggagag
ggcgatgggatattttctccaggaggagcaatctctaacatgtacagtgtgatgattgcc
agatacaagttcttccctgaagttaaaaccaaaggcatggcagctgcacccagactggtc
ctcttcacctcagagcatagtcactattccattaagaaagccagtgcagctctgggcttt
gggactgagaacctgatccttttgaacacagataagagagggagagtcattcctgctgat
ttggaagccaaagtaatagaggccaagcaaaaggggtacgttccgatgtttgtgaatgcc
accgctggtaccaccgtctatggagcctttgatcccatcaatgaaattgcagacatctgt
gaaaagtacaacatgtggcttcatgtggacggcgcatggggaggaggcttgctgatgtcc
aggaagcacagacacaagctgaatggagtggagagggccaactcagtcacctggaaccct
cacaaaatgatgggcgtgccgctgcagtgctctgccgttctggtcagagagtggggatta
ttacaaggctgcaactccatgtgtgctggctacctgttccagacagataaacagtatgac
gtcacatacgacacgggggacaaggccattcagtgtggacgtcatgtcgatatcttcaag
ttctggctcatgtggaaggcaaagggaaccgtaggatttgaacagcatattgacaagtgc
ctggatctgtcagcgcacctctacaatatagtaaaaaacagagaaggcttcgagttggta
ttcgacggggagccgcagcacactaatgtgtgtttctggtatattccaccgagtgtgcgc
ggcctgcctgatggggacgagaggcgggagaggttgcacaaggtggctccaaagatcaag
gcattgatgatggagtctggcactacgatggtgggctaccagccacaaggaaacaaggtc
aacttcttccgcatggtcatctcaaacccggctgctacgatgtcagacatcgatttcctg
atcgaagagattgagcagctggggcacgacttgtaa
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