Pseudoliparis swirei (Mariana hadal snailfish): 130203205
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Entry
130203205 CDS
T09868
Symbol
dnmbp
Name
(RefSeq) dynamin-binding protein isoform X1
KO
K20705
dynamin-binding protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130203205 (dnmbp)
Membrane trafficking [BR:
pswi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130203205 (dnmbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_2
RhoGEF
BAR
SH3_1
Motif
Other DBs
NCBI-GeneID:
130203205
NCBI-ProteinID:
XP_056285101
LinkDB
All DBs
Position
13:complement(4022135..4072437)
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AA seq
1657 aa
AA seq
DB search
MEAGSVVRAVFEFLPSVSEELPLFPGDVIEVLGVVDEFWLLGNKDGVTGQFPSTFVEVVT
IPSTKSGDRLFVCTNDFSSAEPGYSSLKRGDVVVGDAGGSTDLGENWQRGCNAWGVRGLF
PTSCVAELTLSGRSRQLSERSAQAQASELPPYALGQARALMSLHAQLNEELDFREGDLII
ITGRPEPGWFQGELDGRRGVFPEGFVELQGSLRSPREPADCPYSTNDAERFRYEDPYDAG
EGTEEEGVEGEDFHTDDEEQKEEGEEEEEEDGVYVVALYEFRAMEPGELDFDMGDRIRLL
CTLEDGWLEGELRGRRGIFPHRFVKIEDDGQKTAEEANVVEPEEDKENSSGHACPNGSNN
DPEWRTYEDHTVWDLDYFERTEEQRWKSENGRTGAQIDNGGRRGGSSRPVIPAQKAPERP
KSTPPARPRLPSRASLPAGGRRHHGPPSGANGSSSTNGNARPFQPKLTHSLTLPSSQSTN
GRRHQRPAKDGATTSSRGGSLSQALFHLAEGHVQQKLTRHASVGDADMMTRRRPQQTARG
SDGVPPTSVPFEALATSDLETKLSQQLFEFEKSSTSSGAPGDSSSGGDPRRRSRTLRHFS
ILDFGDESDVARGSSRSPASHLSRSNSASSSLERRGTLRPPPPRPRALRSSAPPACKPAR
PAPRVPPRCPGPNAAPPTVFCAPDEPALNLLDQIAEGRAEFGDLAAAREREIRRRLDAEA
ELEREMESEGQRRREEEERYRLLLRLQEVEHDMEAYAHTAEELRNMLEEEEEETARVQAM
ENLEFCNYTLETLALEQQQLQETTLLSSQPKALDSTPTSDSTPAAGAQDPELRMLEKRSK
VIEELLQTEKDYIKDLQMCVEEIIEPLQRKQVKNVDFDGLFGNIGSVIDLSTRLFETLQD
ADSIGNIFLDFKAELEEVYKVYCQNHDDAIALLESYEKDKNIQQHVLECLERLRAIYREW
GKTNYINLGSFLIKPVQRVMRYPLLLTELLGATPESHPDRLQLTQALLAIKEINVNINEY
KRRKDLVVKYRKVDEDTFIDKISKLSMHSIIKKSNRVSSHLKQLTGISPQIKDEAFDEAE
KRFRLQERLIKSFIRDISLYLQHIRESASVKVLAAISFCDIYTERSVLDPERFQRAHRCI
SDEQFTQFKERTEALVINPLTQLLLMFAGPHKLIQKRFDKLLDYDSCKERADRLKDRRVQ
DELQAARNNYEALNAQLLDELPKFHGAAQGLFTGCVTAFAQAQKNFMKSTLGELRPLLQA
FSNQAGTEGNLISKFQEEYGRVLQLLQSFSFCPENLPPAASTKKASEKKTLEKHISKKLL
APPNHIMQTDEHRAGLLVRYGPDKLFQAERNFNAAQDLDISVLEGDLVGVIKQQDPMGSN
NRWLIDSGGGKGFVYSSFLKPYNPRRSQSDISIESQSSTESGYGGSSPVFSRQNSNSTLT
FNQDTATVSFSTSQPQTLSSLHPSLDSASFRRSHHRDGPHHEVASQSNSINSSPRNPSNR
KEYSEPSYRQTGNHRDAYDASSASLRSPKDAADLSETDSYSSPRGNRSQRYGHTDKTYSS
YQWKNGDDCGQKKTSHSREEFTEPEPEDESELDTHQIYYALYSFDARCANELSISANQRL
RIVEFKDMNGNGEWWLGEAEGRRGYVPSNYIRKSEYT
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggggtcggtggtgcgtgccgtgtttgagtttctccccagcgtctccgaggag
ctgccgctcttccccggcgatgtcatcgaggtgctcggtgtcgtggatgagttctggttg
cttggcaacaaagatggcgtcacagggcagtttcccagcacctttgtggaagtggtcacc
atccccagcaccaagtctggagaccgactctttgtctgcaccaatgatttcagctcggca
gagccgggctactcgtccctgaagagaggcgatgtggtagtcggagatgccggcggctcc
acggacctcggagaaaactggcagcgtggttgtaacgcctggggcgtccgcggcctcttc
cccacgtcgtgcgtggcggagctgaccctctcgggtcgctccaggcagctgtccgagcgc
tcggctcaggctcaggcctcggagctccccccttacgccctgggccaggcccgggccctc
atgagcctccacgcgcagctcaacgaggagctggacttccgcgagggggacttgatcatc
atcaccggccggcccgagccgggctggttccagggggagctggatggccgcaggggcgtc
ttcccggaggggtttgtggagctccagggatccctccgatctccccgggagccggcggac
tgcccgtattcgaccaatgacgccgaaagatttcgctatgaggacccgtacgatgcagga
gaggggacagaggaggaaggtgtcgaaggagaggattttcatacggacgacgaggagcag
aaggaggaaggagaagaggaggaggaggaggatggtgtctatgtagtggcactttatgag
tttcgggccatggaaccaggcgagttggactttgatatgggagatcgcattcgtctttta
tgcactttggaggatggctggctggagggggagctgagagggcgacgggggattttccct
catcgttttgtcaaaatagaagacgacgggcagaagactgcagaggaagcgaatgttgtt
gaaccagaagaagacaaggagaacagctcaggtcacgcatgtcctaatgggtcaaataat
gatcccgaatggaggacgtatgaggatcatacagtgtgggacctggactactttgagcgg
accgaggagcaacggtggaaaagtgaaaacggaagaactggagctcagattgacaacgga
ggacggcgaggcgggagcagcaggcccgtcatcccagcacagaaagcgcccgagagacct
aaatccactcctccagcccggccgaggctcccgtctcgggccagcctgcccgcagggggc
cgtcggcaccacggcccgccttctggcgcgaacgggtccagctctacaaacgggaacgcg
cgacccttccagcccaaattaacgcacagcctaaccctcccgagctctcagtcaacaaac
gggagacgccaccagaggccggcaaaggatggcgccaccaccagtagcaggggtggcagc
ctcagccaggcgttgttccacctcgccgagggccacgtgcagcagaagctcactcgccat
gcgagcgtcggcgacgccgatatgatgacgcggcgccgcccccagcagacggcgcgcggc
tccgatggcgttccgccgacgtccgtccctttcgaggccctggcgacctcagacctggag
accaagctgtcccagcagctttttgaatttgagaaaagctcgacttcttccggggctccc
ggggactcgtcttcggggggcgacccgaggcggcgatcgcgcacgttgcgccacttttcg
attctggacttcggcgacgagagcgacgtcgcgcgcggctcctcgcgttcaccggcgtcc
cacctgtcgcggtcgaactccgcctcgtcctcgctagagaggcgcgggacccttcgccct
ccccctcctcgacctcgagcccttcgttcctccgccccgccggcgtgtaagccggcccgc
cccgccccgcgcgtcccccctcgctgcccgggaccaaacgccgctcctccgaccgtcttc
tgcgcccccgacgaaccagctttgaacctcctcgaccaaatagcggaagggagggccgag
ttcggcgacctcgcagccgcccgggaacgcgaaatccggcgtcggctggacgcagaggcc
gagctcgagagggagatggagtcggagggtcagagacggagggaagaggaggagaggtac
cggctgctgctccggctacaagaggtggagcacgacatggaggcgtacgcgcacacggcg
gaggagctcaggaacatgttggaggaggaggaggaggagacggcccgcgtgcaagccatg
gagaacctggagttctgcaactacacgctggagacactggcgctggagcagcagcagcta
caagagacgacgctcctgtcgtcccaacccaaagcgctagattcaaccccgacctcggac
tcgacccccgccgccggcgcccaggatcccgagctgaggatgctggagaagaggtcaaag
gtcatcgaggagctgctgcagactgagaaggactacatcaaagacctgcagatgtgtgtc
gaggagatcatcgagccgctgcagaggaagcaggtaaagaatgtggacttcgatggtctc
tttggcaacatcggctcagtgatcgacttgtcgacccgcctgtttgaaactctgcaggac
gcggactcgatcggaaatatatttctggacttcaaagcggagctggaagaggtgtacaag
gtctactgtcagaaccacgacgacgccatcgctctgctcgagagttacgagaaggacaaa
aacatccagcagcacgtgttggagtgtctggagaggctgagggccatttatcgcgagtgg
gggaaaacgaattacatcaacctcggctctttcttaatcaagccggtgcagcgggtgatg
cgatacccgctgctgctgacggagctgctgggggccacaccggagagccaccccgaccgg
ctccagctcactcaagctctgctggccatcaaagagatcaacgtaaacatcaacgagtac
aagcgcaggaaggaccttgtggtgaagtacaggaaagtcgacgaggacacgttcatcgac
aagatctccaagctgagcatgcactccattatcaagaaatccaaccgtgtcagcagccac
ctgaaacaactcacaggaatatcaccgcagattaaagatgaagcgttcgatgaggcggag
aagaggttccggctgcaggagagactcatcaagtcctttatcagggacatctccctgtac
ctgcaacatatacgggaatcggcatctgtgaaggtcttggcagccatcagcttctgtgac
atctacacggagcgaagtgtcctcgaccccgagcgcttccagagagctcaccgctgcatc
agcgacgaacagttcacgcagtttaaggagcgcacggaggccttggtcatcaacccgctc
acccagctgctcctcatgttcgccgggccgcacaaactcatccagaagcgcttcgacaag
ctgctggactacgacagctgcaaggagcgcgccgaccggctcaaggaccgccgcgtgcag
gacgagctgcaggcggcgcgcaacaactacgaggcgctcaacgcccagctcctggacgag
ctgcccaagttccacggggcggcacaggggctgtttaccggctgcgtgacggcgttcgct
caagcccagaagaacttcatgaaaagcacactgggggagctgaggcccctcctgcaggct
ttttcgaaccaagcgggcaccgagggcaacctgatctccaagttccaagaagagtacggt
cgagttctccaacttctgcagagctttagcttctgcccggagaaccttcctccggccgcc
tccacgaaaaaggcctccgagaagaagactctcgagaagcatatctctaaaaagctgctg
gcacctcccaaccacatcatgcagacggatgagcaccgtgcaggacttctggtccgctat
ggtcccgataagcttttccaggcggagagaaacttcaacgcagcacaggatctggacatc
tctgtgctggagggagaccttgtcggtgtaatcaagcagcaggaccccatgggtagcaac
aaccgctggctcattgatagtggcggcggcaagggtttcgtgtacagctccttcctcaaa
ccctacaacccgcgcaggagccaatcggacatctccatcgagagccaatcgtccactgag
tccggctacggcggctcctcgcccgtcttctcccgccagaacagcaacagcacgctgacc
tttaaccaggacacggccaccgtcagcttctccacatcgcagccccaaactctttcatct
ctgcacccttcgctggactctgcctcgtttcgccggagtcaccacagagatggaccccac
cacgaagtcgccagtcagagcaactccataaactcctcccccagaaatccctcaaaccgc
aaggaatactccgagccgtcgtaccgccagacgggcaatcacagagacgcctacgatgcg
agttctgccagtctgaggagtcccaaggacgcggcggacctctcggagacggactcttac
tcttcacccagaggcaatcgctcgcagcgctacggacacacagacaaaacctacagttca
taccagtggaagaatggagatgattgtggccagaagaaaacgtctcactccagagaggag
ttcaccgagccggagccggaggatgagagtgaattagatacccatcagatttactacgcg
ctctactccttcgacgcccgctgcgccaacgaactgagcatctcggccaatcagcggctg
cggatcgtggagttcaaggacatgaacggcaacggcgaatggtggctgggggaggcggaa
ggccgacgaggctacgtgccttccaactacatccgcaaatccgaatacacatga
DBGET
integrated database retrieval system
