Pseudoliparis swirei (Mariana hadal snailfish): 130203225
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Entry
130203225 CDS
T09868
Name
(RefSeq) protoheme IX farnesyltransferase, mitochondrial isoform X1
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00190
Oxidative phosphorylation
pswi00860
Porphyrin metabolism
pswi01100
Metabolic pathways
pswi01240
Biosynthesis of cofactors
Module
pswi_M00154
Cytochrome c oxidase
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
130203225
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
130203225
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pswi01006
]
130203225
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130203225
Enzymes [BR:
pswi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
130203225
Prenyltransferases [BR:
pswi01006
]
Compound prenylation
Protoheme farnesyltransferase
130203225
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
130203225
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-GeneID:
130203225
NCBI-ProteinID:
XP_056285156
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All DBs
Position
13:complement(8977475..9009148)
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AA seq
469 aa
AA seq
DB search
MYKTPCSRLSGLIGVGVKQKLVQHVPLRKQAARSLIQLHKRDPSSWLTYQHLNFLKRQYV
AKNSSELHQRAAPKPSPALTAVDERDDGVERRAQRIPTIDPVVTDTVPQAEDVPGKAQPG
GSTSEPNADDAAAQKDSASPDETPHVHEETDEARDARLDRQWKLLKVDVAELPDIYAKLA
KINLTALVVTSAAAGYAMAPVPFDPLTFFVASLGTCLASCAANSINQYFEVPFDSNMNRT
KNRPLVRGQISPLHAVSFALACGIPGIALLTAAVNPLTGFLGALNIFLYTCCYTPLKRHS
ITNTWVGAVVGAIPPVMGWTAATGCLEPGALLMGGFLYSWQFPHFNALSWNLREDYSRGG
YRMMSVTHPGMCKRVALRHSLGLIGLSTLAPVLDVTTWTFPVVSLPINLYISYLAFRFHR
QGDRGSARKLFFCSLWHLPMLLLLALTCKKPRGEQEAPPTAAAALALQS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaacgccatgtagcagactgtcaggtttgattggtgtcggcgtgaagcagaaa
ttagttcaacatgttcctctacggaagcaggctgctcgcagccttattcagctgcacaaa
agagatccatcaagctggctgacgtaccaacacctcaacttcctgaaacgccagtatgta
gccaagaacagcagcgagcttcaccagcgtgccgccccgaaaccgtccccggccctgacc
gccgtggacgagagagacgacggcgtcgaaagacgagcgcagagaataccaacgattgat
cctgtggtcacggatactgtcccgcaggcagaggacgtccccggtaaagcacagcccggg
ggatccacctcggagcccaatgcagacgatgcggcggcccagaaagattctgcgtcgcca
gatgagaccccacatgtccacgaggagacggatgaggcccgggatgcccgtctcgaccga
cagtggaagctgctgaaggtcgatgtggctgaactgccggatatctatgccaagcttgca
aaaatcaatctgacagcactggtggttacgagtgcagcagccggctatgcaatggctccg
gtgccctttgaccccctcaccttcttcgtggcctccctgggaacatgcctcgcctcttgc
gctgccaattccatcaaccagtacttcgaggtgcccttcgactccaacatgaaccgcaca
aagaaccgcccactggtcagaggacaaatcagtcccctccatgccgtgtcctttgctctg
gcctgtggaattcccggaatcgctctgctcacggcggcggtgaaccccttgacgggcttc
ctgggcgccctcaacatcttcctgtacacctgttgctacactccgctcaagaggcacagc
atcaccaacacctgggtgggggccgtggtgggcgccatacctcccgtcatgggctggacg
gctgccaccggttgtctggagccaggtgctctgctgatgggtggcttcctgtacagctgg
cagttccctcacttcaacgccctcagctggaacttgagggaggattactcgcgcggcggc
taccgcatgatgtccgtcacccacccgggcatgtgcaagcgggtggccctgcgccacagc
ctgggcctgatcggcctgtccacgctggcgcccgtgctggacgtcaccacctggaccttc
cccgtcgtctccctgcccatcaacctgtacatcagctacctggccttccgcttccaccgg
cagggcgaccgcggcagcgcccgcaagctgttcttctgcagcctgtggcacctgcccatg
ctgctgctgctggcgctcacctgcaagaagccccggggggagcaggaggctccgcccact
gcggccgcggccctcgcgctgcaaagctga
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