Pseudoliparis swirei (Mariana hadal snailfish): 130203244
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Entry
130203244 CDS
T09868
Symbol
fbxo11b
Name
(RefSeq) F-box only protein 11 isoform X1
KO
K10297
F-box protein 11
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130203244 (fbxo11b)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130203244 (fbxo11b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
Motif
Other DBs
NCBI-GeneID:
130203244
NCBI-ProteinID:
XP_056285191
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All DBs
Position
13:7148867..7161212
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AA seq
891 aa
AA seq
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MNSVRATNRRPRRVSRPRPVQPERNNGDRDEEAPAAAAAEMAIEESGPGAQNSPYQLRRK
TLLPKRTAAASATASACPSKGPMEGASTSSTEAFGHRAKRARVSGKSHDLPAAPAEQYLQ
QKLPDEVVLKIFSYLLEQDLCQAACVCKRFSQLANDPILWKRLYMEVFEYTRPMMHPEPG
RFYQVSPEEHEHPNPWKESFQQLYKGAHVKPGFAEHFYSNPGRYKGRENMLYYDTIEDAL
GGVQEAHFDGLIFVHSGIYTDEWIYIESPITMIGAAPGKVADKVVIENTRDSTFVFMEGS
EDAYVGYMTIKFNPDDKSAQHHNAHHCLEITVNCSPNIDHCIIRSTCTVGSAVCVSGQGA
CPTIKHCNISDCENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRD
VGVFTFDHGMGYFENCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFI
ENKIYANNFAGVWITSNSDPTIRGNAIFNGNQGGVYIFGDGRGLIESNDIYGNALAGIQI
RTNSCPIVRHNKIHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRKNRIH
SGKQVGVYFYDNGHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGL
GFIEDNEIFDNAMAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQA
GVLISTNSHPILRKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKD
NKILNNQDAIEKAVSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGH
DVEFIRHDRFFCDCGAGTLSNPCTLAGEPTHDTDTLYDSAPPIESNTLQHN
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtcagagccaccaacaggagacccaggcgagtgtcgaggccgcgcccggtg
cagcccgaacggaacaacggagacagagatgaggaggctcctgcagcagctgcagcagag
atggctattgaggagtctggtccaggagctcagaacagtccctatcagcttcgacgcaag
accctgcttcccaaaagaaccgctgctgcctctgccaccgcctctgcctgccccagcaag
ggcccaatggagggagcttcaacttcatcaacagaggcctttggccatcgagccaagcgg
gcacgagtgtccggtaagagccacgatctgccagcagccccagcagagcaatatctgcaa
cagaagcttccagatgaggttgttttgaagatattctcctacttactggaacaggacctc
tgtcaggcagcttgtgtctgcaaacgattcagccagctagccaacgaccccatcctatgg
aagcgtctatacatggaggtgtttgagtacacacgtcccatgatgcatcctgagccaggc
aggttttaccaagtcagccctgaggaacatgaacacccaaacccctggaaggagagcttc
caacagctgtacaaaggtgctcatgtaaaaccaggctttgctgagcatttctacagtaac
cccggcagatacaaaggcagagagaacatgctgtattatgacaccattgaggatgcgctg
ggtggagtgcaagaggctcactttgacggtctaatttttgtccactctggcatctataca
gatgagtggatttatatagagtcccccatcaccatgattggtgcagctcccggtaaagta
gcagacaaggtggtgatagagaatactagagactcaacgtttgtcttcatggagggctca
gaggatgcttatgtgggatacatgaccatcaagtttaatcctgatgacaagtcggcgcag
caccataacgcccaccactgtctggagatcaccgtcaactgcagccccaacatcgaccac
tgcatcatccgctccacatgcacagtgggttcggctgtgtgtgtgagtggtcagggagct
tgtccaaccatcaaacactgcaacatcagtgactgtgagaacgtaggactgtacattaca
gatcacgcacagggcatttatgaagacaatgaaatcagcaacaatgcactagcgggaatt
tgggtgaaaaaccatggtaatcccatcattagacgtaaccacatccaccacggtcgagat
gttggcgtgttcaccttcgatcacggcatgggttactttgagaactgcaacatccacaga
aaccgcatagcgggcttcgaagtgaaggcctacgccaaccccacagtggtgcgttgtgag
atccatcacggccaaacaggaggcatctatgtccacgagaagggacggggacagtttata
gagaacaaaatctatgccaataactttgctggtgtgtggatcacgtccaacagcgacccg
acgatacggggaaatgctatattcaacggtaaccagggaggggtgtacatatttggagat
ggacggggtttgatagagagtaacgatatctatggtaacgccttggcgggaatccagatc
cgaaccaacagctgccccattgtacggcacaacaagatccacgacggtcagcatgggggc
atctacgtgcacgagaaaggccagggggtgatcgaggagaatgaggtttacagcaacacc
ctggctggagtctgggtgaccacaggcagcactcctgtcctccgcaagaaccgcatccac
agtggcaaacaggtgggcgtgtatttctatgacaacgggcatggtgtgttggaagacaat
gacatctacaatcacatgtactctggtgtacaaattaggacggggagcaacccaaagatc
cggcgcaacaagatatggggaggccagaacggagggattttagtctacaactcgggtctg
ggcttcattgaggacaatgagatctttgataatgccatggcgggggtgtggatcaagacg
gatagcaaccccacactgagacgaaataagattcatgacggcagagatggaggcatctgc
atcttcaatggaggcagaggtctgctggaagagaacgacatcttcaggaacgctcaagcc
ggtgtgctgatcagcacaaacagccacccgatactccgcaagaaccgcattttcgatggc
ttcgctgcaggtattgaaatcactaaccacgccacagccacgctggagggcaaccagatc
ttcaacaatcgctttgggggcctgtttttggcctcgggggtcaacgtcaccatgaaagat
aataagattctgaataaccaggatgccattgagaaggcggtgagcagaggacagtgcctc
tacaagatctccagctacaccagttaccccatgcacgacttctacagatgtcacacctgt
aatacaacagataggaacgcaatctgtgtaaactgcatcaaaaaatgccaccaagggcac
gatgtagagtttatacggcatgatcggtttttctgtgactgcggagcgggaacgttgtcc
aacccgtgtacgctggccggagagcccacacacgacacagacactctgtacgactcggcg
ccgcccatcgagtccaacacgctgcaacataactga
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