Pseudoliparis swirei (Mariana hadal snailfish): 130203264
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Entry
130203264 CDS
T09868
Symbol
cacna1g
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1G
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130203264 (cacna1g)
04020 Calcium signaling pathway
130203264 (cacna1g)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130203264 (cacna1g)
Ion channels [BR:
pswi04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130203264 (cacna1g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Neur_chan_memb
DUF3043
DUF4834
DUF7501
Motif
Other DBs
NCBI-GeneID:
130203264
NCBI-ProteinID:
XP_056285228
LinkDB
All DBs
Position
13:11329557..11476498
Genome browser
AA seq
2307 aa
AA seq
DB search
MLVILLNCVTLGMFHPCEDIICDSERCKILQKFDDFIFAFFAVEMVIKMVALGIFGKKCY
LGDTWNRLDFFIVVAGMLEYSLNLQNVSFSAVRTVRVLRPLRAINRVPSMRILVNLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLGNFSFPISVKLEKYYHTKNEDENP
FICSEPGGNGMRDCGSVPKVYEEGGLQCTLSSEFYNSTDNTTCVNWNQYYNNCTAGLVNP
FKGAINFDNICYAWIAIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIIGSFFMINLC
LVVIATQFSETKQRESQLMKEQRVRFMSNASTLASLSEPGSCYDEMLKYLVHVVNKGARR
AARLCRLLARRAGFNIAASPPPTEPQRSLRRRRKTSRQGSVSVHQMTRHHQQHHHHHHYH
LGNGSVRGAGGGRCPEGQEFEAGAHSNNGGAAVAPAGAGHLALAAPPSLTPARSDANLPV
LSRLPEGAADASSARGAFHTGSLRPSPTNMGPTPGPSSFSPPPVSRAMKRNSVPFAAPGP
KNYPSLQTRRGSAAAGTLTSVSCNLNIPPAAAERRPSSPADTPTPIAQLSCQLSARDLST
TSSAMDTAAMTLDPESCPYCAKALANESEGNDTPGDSDSDGIYEFTQDLHRKDRRDSRQP
GKQRCSLGKSAAKVVHFWRLVCDTFRKIVDSKYFGRGIMIAILINTLSMGIEFHEQPEEL
TNALEISNIVFTSLFALEMLLKILVYGPFGYIKNPYNIFDGIIVVISVWEIVGQQHGGLS
VLRTFRLMRVLKLVRFMPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKF
GCEGQGGDTQPDRKNFDSLLWAIVTVFQILTQEDWNKVLYNGMASTTPVAALYFIALMTF
GNYVLFNLLVAILVEGFQTEGDASTPGSEIDSCARSMEDVDGSKKDLSACAVPVNGHVDL
KTSLTPPLITHTAATPMPVPKLPVAGDPVLGCESRRGSNVSMDPACYDKSPTSAQSSAPN
AAWTTGSGWTSRRSSWNSLGRAPSLKRQKRQSGERCSLLSGEGGSCSDEGGGEEDDDGGL
MEEDDPSLVRTDSTSQSQTRHRRMESMETRSSMELPPDALLQVPYLYRSASMHSSRPPSL
GHLLPPGHSGCNGKGSPASPGPTHVSLEDNMEDENTEEEANLGRFSRLFRWLEKKQPEWC
RQRDTWSLYLFPPESRFRVVCNRIINHKMFDHIVLIIIFLNCITIAMERPHISIERIFLK
LSNYIFTAIFVAEMAIKIVGLGWCLGDKSYLRSSWNILDGMLVMISVIDILVSLIFNSGT
KILGMLRVLRLLRTLRPLRVISRAPGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGV
QLFKGKFFVCVGDQIMNITNKSDCLLNKNKWERHKYNFDNLGQALMSLFVLASKDGWVDI
MYNGLDAVGVDQQPSKNHNPWMLLYFISFLLIVAFFVLNMFVGVVVENFHKCRRHQEAAE
AKRREEKRLKRMEKKRRSKEKELAEAQSKPYYSDYSPTRLLIHKMCTSHYLDLFITIIIG
INVITMSMEHYQQPKELKKALTICNYIFTVIFVLESILKLVAFGFRRFFKDKWNQLDLAI
VLLSIMGITLEEIDGNALPINPTIIRIMRVLRIARVLKLLKMAVGMRALLDTVMQALPQV
GNLGLLFMLLFFIFAALGVELFGDLICDELHPCEGLGRYATFKNFGMAFLLLFRVSTGDN
WNGIMKDTLRNCGQNSTCYNTVVSPLYFVSFVLTAQFVLVNVVIAVLMKHLEESNKEAKE
EAELEAELALERQTHGGGGGGDVAPTRSPQLNPLALGVDRASSAGGSPRRAAGGGGGDQE
RERPLDSPTADITRDSVNIGADPPPCPEPPLEPEQLGPGGPPEDNLLSVRKPAVGRTHSL
PNDSYMFLPLQLVEAADPPPAHLLAQTQGPQHTLGTSRGHSGSSSSVRSQSEERSPQQLS
VPADLFRPISPHSLSDSECIPRLPPPRRAHTLSRTLRRQVAVSTDSQEALCSDGGESNKG
LVNVASLGLPPCPSSSPSSSPRSYYYQQPATSGPSPKPPRPGSVHTQLYDQHCLASHSPT
PPSRARPHQQEEASADQEVSLIIDGVLASGGVTAEASGEESQSVSQRPLKRFYSADAQGL
SADPRPRPRPYSWLDDPRSSAESGPRRSASGFVSRADSLQTPAHASVPSPRHKKKMSPPC
ISVDPPVGQEGLYPGGAGRLGSMTGLGGLGMPPPLPSRDTCLRRRAPSSDSKDSFDLGVG
EGSGLDGGPPNPNANPKLLTPPREDKP
NT seq
6924 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgatcctgctgaactgcgtgacgctgggcatgtttcatccgtgcgaggacatc
atctgcgactccgagaggtgcaagatcctgcagaaattcgatgacttcatcttcgcgttc
ttcgccgttgagatggtcatcaagatggtggccctggggatttttggcaagaagtgttac
ctcggagacacgtggaaccgcttggacttcttcatagtggtggctgggatgctggagtac
tcgctcaacctgcagaacgtcagtttctccgcggtgcggacggtccgcgtgctgagacct
ctgagagccatcaaccgagtgccaagtatgcgcatcctggtgaacctgctgctggacacg
ctacccatgctcggcaatgtgctgctgctctgcttcttcgtcttcttcatcttcggcatc
gtgggcgtccagctgtgggccggcctgctccgcaaccgctgcttcctcggcaacttctcc
ttccccatctccgtgaagctggagaaatactaccacaccaagaacgaggacgagaacccc
ttcatctgctccgagcccggaggcaacggcatgagggactgcggctcggtgcccaaggtg
tacgaggaaggaggcctgcagtgcacgctgagctcggagttctacaacagcaccgacaac
accacctgcgtcaactggaaccagtactacaacaactgcaccgccgggctggtcaacccc
ttcaagggggccatcaacttcgacaacatctgctacgcgtggatcgccatctttcaggtg
atcaccctggagggctgggtggaaatcatgtattatgtgatggatgcccactccttctac
aacttcatctacttcatcctactcatcattattggctccttcttcatgatcaacctgtgc
ctggtggtcatcgccacgcagttctcggagaccaagcagagggagagtcagctgatgaag
gagcagcgggtccgcttcatgtccaacgccagcaccctggcctcgctctccgagccgggc
tcctgctacgacgagatgctcaagtacctggtgcacgtggtcaacaagggcgccaggcga
gcggcccgtctctgcaggctgctggcccgacgcgccggcttcaatatcgccgcctcgccg
ccgcccacggagccccaacgcagcctgaggaggaggaggaagacctccaggcaggggtcc
gtgtcggtccatcagatgacgcgccaccaccagcagcaccaccaccaccaccactaccac
ctgggtaacggcagcgtgaggggcgcagggggcggacggtgtccggagggtcaggagttc
gaggccggcgcacatagcaacaacggaggggccgccgtggcgcccgccggcgccgggcat
ctcgctttagccgcgccgccatcgctgacgccggcccgctccgacgcaaacctgccggtt
ctgtcccgacttcccgagggagccgccgatgcgtcctcagctcgcggtgcattccacaca
ggaagtctccgcccctcacccacaaacatgggtccgacgccgggcccctcctccttttcc
ccgcctcccgtgtctcgggccatgaagaggaactctgtgccgttcgcggctccggggccg
aagaactacccgagtctgcagacccgacgagggagcgccgccgccggcactctgacgtcc
gtcagctgcaacctcaacatcccacccgcggccgcggagagacggccgtcgagcccggcg
gacacgcccactcccatagcccagctctcctgccagctgtcggcccgtgacctcagcacc
accagcagcgccatggacacggccgccatgaccttggaccccgagagttgcccctattgc
gccaaggccctggccaacgagtcggagggcaacgacacccccggggactcggacagcgac
ggcatctacgagttcacccaggacctccaccgcaaggacaggagagacagccggcagccc
gggaagcagcgctgcagtctggggaaatcggcggcgaaggtggtgcacttctggaggctc
gtgtgcgacaccttccggaagatcgtggacagcaagtacttcggacgagggattatgatc
gccatcctgatcaacacgctgagcatggggatcgagttccacgagcagcccgaggagttg
accaacgcgctggagatcagcaacatcgtgttcaccagcctgttcgctctggagatgctg
ctgaagattctggtctacgggcccttcggctacatcaagaacccctacaacatctttgat
ggcatcatcgtggtcatcagcgtgtgggagatcgtgggtcagcagcacggcggcctctcg
gtgctgaggaccttccggctgatgcgggtgctgaagctggtccggttcatgccggccctg
cagaggcagctggtggtgctgatgaagacaatggacaacgtggccaccttctgcatgctg
ctcatgctcttcatcttcatcttcagtatcctgggcatgcatctgtttggatgcaagttt
ggctgcgaggggcagggtggagacacccagccggacaggaaaaactttgactccctcctc
tgggctatagtgaccgtcttccagatcctgacccaggaggactggaacaaggtgctctac
aacggcatggcctccaccactcccgtggccgccctgtacttcatcgcgctcatgaccttc
ggcaactacgtcctcttcaacttgctggtggccatcttggtggagggtttccagaccgag
ggcgacgcctccacaccgggctcggagatcgactcctgcgcgcggagcatggaggacgtc
gacggcagcaagaaggatttatcggcctgcgcagtgcctgtaaatggtcatgtggacctg
aagaccagcctcactccacctctgattacccacaccgccgccacccccatgcccgtaccc
aagctgcccgtcgcaggggaccccgtcctgggctgcgagtcccgtcgaggcagcaacgtc
tccatggacccggcctgctacgacaaatccccgaccagtgcccagagctccgcccccaac
gctgcgtggaccaccggcagcggctggaccagccgacggtccagctggaacagcctgggt
cgcgccccgtcactcaaacggcagaagcgtcagtccggggagcggtgctctctcctctcc
ggggagggcggctcctgctcggacgaaggcgggggagaggaagacgacgacggcgggttg
atggaggaagacgacccctccctggtccggacggactccacgtcccagtcgcagacccga
cacaggaggatggagtcgatggagactcgcagctccatggagttgccccccgatgctctg
ctgcaggtgccctacctgtaccgctcggccagcatgcacagctccagacccccgtcactg
ggccacctgctgcccccggggcacagcggctgcaacgggaagggctctccggcatccccg
ggccccactcacgtctctctggaggacaacatggaagacgaaaatacagaggaggaggcc
aacctgggtcgtttttccagactgttccgctggctggagaagaagcagcccgagtggtgt
cggcagagagacacctggtccctctacctgttccctccagagtcccggtttcgggtggtg
tgcaaccggatcatcaaccacaagatgttcgaccacatcgtgttgatcatcatcttcctc
aactgcatcaccatcgccatggagaggcctcacatctccatcgagcggatcttcctgaag
ctgtccaactacatcttcacggccatcttcgtggctgagatggctataaagatcgtgggg
ttgggctggtgtttgggggacaagtcgtacctgaggagcagctggaacattctggatggg
atgctggtgatgatctccgttatcgacatcctggtgtctctaatcttcaactcgggcacc
aagatcttgggcatgctcagagtgctgcggctgctgaggaccctgaggccgctacgtgtg
atcagcagagccccggggctaaagctggtggtggagaccctgatgtcgtcactgaagccc
atcggcaacatcgtggtcatctgctgcgccttcttcattatcttcggcatcctgggagtg
cagctcttcaaagggaagttcttcgtctgcgtcggagatcaaatcatgaacatcaccaac
aagtctgactgcttgctcaacaaaaacaaatgggagagacacaagtacaactttgacaac
ctgggacaggccttgatgtctctgtttgttctggcgtcaaaagatggctgggtggacatc
atgtataacggactagacgctgtaggagttgaccaacagccctcaaaaaaccacaacccg
tggatgctgctctacttcatctccttcctgctgattgtggccttcttcgtgctcaacatg
ttcgtgggcgtcgtggtggagaacttccacaagtgccggcgccaccaggaggccgccgag
gccaagcgcagggaggaaaagagactgaaacgcatggagaaaaagagacggagtaaggag
aaggagctggctgaagctcagagtaagccctactactcagattactcccccactcgcctg
ctcatccacaagatgtgcaccagccactacctggacctgttcatcaccatcatcatcggg
atcaacgtcatcaccatgtccatggagcactaccagcagcccaaggagttgaaaaaggcg
ttgacgatctgtaactacatcttcaccgtcatcttcgtcctggagtccatcctgaagttg
gtggccttcggcttccgacgcttcttcaaggataagtggaaccagctggatctggccatc
gtgctgctgtccatcatgggcatcactctggaggagattgatggcaacgcgctgcccatc
aaccccaccatcatccgcatcatgagagtcctgaggatcgcacgagtgttgaagctcttg
aagatggcggtggggatgagagctctgctggacaccgttatgcaagccctgcctcaggtg
gggaacctgggactcctcttcatgcttctcttctttattttcgcagcgctgggtgtggag
ctgttcggcgacttgatctgcgatgaattacatccatgtgaaggtctggggcgctatgcg
acgttcaaaaactttgggatggcatttctgctgctcttcagagtttccaccggagacaac
tggaacggcataatgaaggacacgctgaggaactgcggccagaacagcacttgctacaac
accgtggtctcgccgctctacttcgtctccttcgtgctgaccgcccagttcgtcctggtc
aacgtcgtcatcgccgtgctgatgaagcacctggaggagagcaacaaggaagccaaggag
gaggcggagctggaggcggagctggcgctggagcggcagacgcacggggggggcggagga
ggagacgtggcgccgacgaggtcgccccagctcaaccctctggcgctgggcgtggacagg
gcgagctcggcggggggttccccccgcagggccgccggcggggggggcggggaccaggag
agagagcgtcccctggactcgcccaccgccgatataaccagagactcggtaaacatcgga
gcagaccccccaccgtgcccggagcccccgctggagccggagcagctgggccccgggggg
ccgccggaggacaacctgctgagtgtcaggaagcctgcggtgggacgcacacactccctg
cccaacgacagctacatgttcctccccctgcagctggtggaggccgcggatccgcctcca
gcacaccttctagcacagacacaggggccccagcacacactgggcacctccaggggccac
tcaggttccagcagctcggtgcggtcccagtcggaggaacgctccccccagcagctgagc
gtccccgcggacctcttcagacccatcagcccccacagcctctccgactccgagtgcata
ccacgacttcccccccccaggcgcgcgcacacgctcagccggacgctccgcagacaggtc
gccgtgtctactgattctcaagaggccctgtgttcagacggaggggagagcaacaaagga
ctcgtgaacgtggcctctctgggcctccctccgtgcccctcctcctccccctcctcctct
ccccgctcctattactatcagcagcccgccacatccggcccctcccctaagccgccccgc
cccggcagcgtgcacacccagctttacgaccagcactgcctcgcctcccactcgccgacg
cccccctcgcgggccaggccgcaccaacaggaggaggcctcggcggaccaggaggtgtcc
ctcattatcgacggggtgttggctagcggcggcgtcacggcggaggcgagcggcgaggag
agccagagtgtgagccagaggccgctgaagaggttctacagcgctgacgcgcagggtctc
agcgcggacccccggccccgcccccgcccatactcctggctggacgacccgcgctcctcg
gcggagtccggcccacggcgcagcgcctccggcttcgtgtcgcgggccgacagcctgcag
acccccgctcacgcctcggtgccctcgccgcgacacaagaagaagatgagcccaccctgc
atctccgtggacccccccgtcggacaggagggcctctacccgggcggggcgggccgactc
gggagcatgacggggctgggggggttggggatgccccctcctctgcccagcagggacacc
tgcctgaggaggagagcgccctctagtgactcgaaggactcctttgacctgggggttggg
gagggctcgggactggacgggggccccccaaaccccaacgccaaccccaagctactgact
cctcccagagaagacaaaccctga
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integrated database retrieval system
