Pseudoliparis swirei (Mariana hadal snailfish): 130203278
Help
Entry
130203278 CDS
T09868
Name
(RefSeq) signal transducer and activator of transcription 5B-like isoform X1
KO
K11224
signal transducer and activator of transcription 5B
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04012
ErbB signaling pathway
pswi04081
Hormone signaling
pswi04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
130203278
09133 Signaling molecules and interaction
04081 Hormone signaling
130203278
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
130203278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130203278
Transcription factors [BR:
pswi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
STAT
130203278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STAT_bind
STAT_alpha
STAT_int
STAT_linker
SH2
STATa_Ig
Motif
Other DBs
NCBI-GeneID:
130203278
NCBI-ProteinID:
XP_056285273
LinkDB
All DBs
Position
13:14251697..14269059
Genome browser
AA seq
786 aa
AA seq
DB search
MAMWIQAQQLQGEALHQMQALYGQHFPIEVRHYLAQWIECQLWDLVELDNPAEEAKAKRL
LENLVAELQKKAQLQGGEDGFLLKIKLGHYANQLKSTYDRCPLELVRCIKHILHSEQRLI
QEATNASCGSGVQAMDSLSQRHQQINQTFEELRLATQETENELRKLQHSQEYFIIQYQEN
LRIQAQLSSLSSLPQAERTQRETTLQSKRTTVEAWLTREASTLQKYRLDLSEQHQKTLAL
LRKQQTLILDEELIQWKRRQQQAGNGGPHEGGLDVLQSWCEKLADLIWQNRQQIRRCEHL
TQQLPLPGPMEELLSKLNADITDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGGK
LNVHMNPPQVKAVIVSEQQAKALLKNESTHSESSGDILNNNCVMEYQQATGTLSAHFRNM
SLKRIKRSDRRGAESVTEEKFTVLFESQFSVGGNELVFHVKTLSLPVVVIVHGSQDNNAT
ATVLWDNAFSEPGRVPFSVPDKVLWPQLCDTLDMKYKAEMHSGRGLSEDNMVFLAQKVFT
SSSNNPEDSRNMTITWAQFNRESLPGRNFTFWQWFDGVVELMKKHLKPHWNDGAILGFVN
KQQAQDMLMSKPNGTFLLRFSDSEIGGITIAWVAENPNKTGERLVWNLLPYTTKDFSIRS
LADRISDLNHLLFLYPDRPKDEVFAKYYTPLLSKAVDGYVKPQIKQVVPEFTTPNPEPSG
GTPTFMDHAASPSVSLPNNFAVFPSMSDTILDADGDFDLEDTMDVARHVEELLRRPMANQ
WSSQQS
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtggatccaggcccagcagctgcagggcgaggccctgcaccagatgcaggcg
ctgtacggccagcacttccccatcgaggtgcgccactacctggcccagtggatcgaatgc
cagctctgggatttggtggagttggacaacccggcagaggaagccaaagccaagcgtctg
ctggagaacctggtggccgaactccagaagaaagcccagctccagggaggagaggatggc
ttcctgctcaagatcaagctgggtcactatgccaaccagctcaagagcacttatgaccgc
tgtcctctggagctggtgcgctgcattaaacacatcctgcactcagagcaacggctcatt
caagaagctacaaatgccagctgtgggagtggggtgcaggccatggacagcttgtcgcag
cgccaccagcagatcaaccagacctttgaggagctgcgtctggccacgcaggagacggag
aacgagctgaggaagctgcagcacagccaggagtacttcattatccagtaccaggagaac
ctgcgcatccaggcccagctgagcagcctgtcgtcactccctcaagctgagcgcacccag
cgggagacaaccctccagagtaagaggaccactgtggaggcctggctcaccagagaggcc
agcacattacagaaatacaggcttgacctgtcggaacaacaccagaagaccctggccctg
ctaaggaagcagcagactctgatcctggatgaggaactcatccagtggaagaggaggcag
cagcaggctggcaacgggggtcctcatgaggggggactggatgtcctgcagtcctggtgt
gagaagctggctgacctcatctggcagaaccggcagcagatccgacgctgtgaacatctc
acccagcagctgcctctgccgggccccatggaagagctgctgagcaaactgaacgccgac
atcaccgacatcatctcggccctggtcacgagcaccttcatcattgaaaagcagccgccc
caggtgttgaagacccagaccaagtttgcagccacggtgcgcctcctggtgggcgggaag
ctcaacgtccacatgaatccacctcaggtcaaggcggtcatcgtgagcgagcagcaggcc
aaagcgctgctgaagaatgagagcacacacagtgagagcagtggagacatcctgaacaac
aactgtgtgatggagtatcagcaggccactggcaccctcagtgcacacttcagaaacatg
tcactgaagaggatcaagcggtcggaccgccgcggtgccgagtcggtgacggaggagaag
ttcacagttctgtttgaatctcagttcagcgtcgggggcaacgagctggtcttccacgtc
aaaaccttatcgctgcccgtggtcgtgatcgtccacggcagtcaggacaacaacgccaca
gccaccgtcctgtgggacaacgccttctctgagcctggccgggtgccgttctccgtgcca
gacaaggtgctgtggccccagctgtgtgacacccttgatatgaagtacaaggcggagatg
cacagtgggcgtggcctgtcggaggacaacatggtcttcctggcacagaaagtgttcacg
agcagcagcaacaaccccgaggactcccgcaacatgaccatcacgtgggcccagttcaac
cgggagagcttaccgggacgaaactttaccttctggcagtggtttgatggagtcgtggag
ctcatgaagaaacatctcaagcctcactggaatgacggggccatcctcggcttcgtgaac
aagcagcaggctcaggacatgctgatgtccaaacccaacggcaccttcctgctgagattc
agcgactccgagatcggaggcatcaccatcgcctgggtggcagagaaccccaacaagaca
ggtgaaaggctggtctggaatctgttgccctacacaaccaaggacttctccatccggtcc
ctggcggaccgcatcagtgacctgaaccaccttctgttcctctaccccgaccgacccaaa
gacgaggtcttcgccaagtactacacccctctgctctcgaaagccgtggatggatatgtg
aaaccgcagatcaaacaagttgtgccagaattcaccaccccgaaccctgagcccagtgga
gggacccccacgttcatggaccacgcggcatcgccctccgtgagcctccccaacaacttt
gccgtcttcccttctatgagtgacaccattttggacgcagatggagactttgacctggag
gacacgatggacgtggcgcgccatgtggaggagctgctccgccggccgatggccaaccag
tggagcagccagcagtcctga
DBGET
integrated database retrieval system
