Pseudoliparis swirei (Mariana hadal snailfish): 130203317
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Entry
130203317 CDS
T09868
Symbol
psmc5
Name
(RefSeq) 26S proteasome regulatory subunit 8
KO
K03066
26S proteasome regulatory subunit T6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
130203317 (psmc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pswi03051
]
130203317 (psmc5)
Proteasome [BR:
pswi03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
130203317 (psmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
nSTAND3
OB_PRS7
RuvB_N
TIP49
AAA_14
AAA_3
AAA_28
Mg_chelatase
NPHP3_N
AAA_33
ATPase
Parvo_NS1
AAA_18
AAA_17
PhoH
IstB_IS21
AAA_7
DUF815
AAA_25
AAA_24
Sigma54_activat
FapA
RNA_helicase
ABC_tran
DUF5906
bpMoxR
AAA_11
APG6_N
TsaE
Zeta_toxin
DivIC
AAA_19
HR1
CC_Bre1
DUF7121
Motif
Other DBs
NCBI-GeneID:
130203317
NCBI-ProteinID:
XP_056285358
LinkDB
All DBs
Position
13:2675695..2680307
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AA seq
406 aa
AA seq
DB search
MEVDGTDHMEMGESKGGSGLRQYYLSKIEELQLTVNDKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRVMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HSPSIIFMDEIDSIGSTRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLKKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVNQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggacggtactgatcatatggagatgggggagagtaaaggtggttctggtctc
cgacagtactacttatctaagatagaagagttacaattgacagttaatgacaagagccag
aatctcagacgtctgcaggcgcagagaaatgagctcaatgccaaagtgcgtctccttcgt
gaggagctgcaattactacaagagcaggggtcgtatgtcggggaagtggtgagggtcatg
gacaaaaagaaagtgctggtcaaggttcacccagaaggaaaatttgtcgtggatgtggac
aagaacattgacatcaatgatgtgactcccaattgccgtgtggctctgcgtaacgacagc
tacacgctgcacaagatcttgcccaacaaggtggaccctctggtatcccttatgatggtg
gagaaggtgccggactctacctatgaaatgattggcggcctggataagcagatcaaggag
atcaaagaagtgattgagctgcctgtcaagcaccccgagctgtttgaggctttaggcatt
gcccagcccaagggcgtgctgctgtacggccccccgggaacagggaagacgctgctggcg
agagccgtggcccaccacaccgactgcaccttcatcagggtgtctggctcggagctggtc
cagaagtttattggagagggcgcccgtatggtgcgcgagctgttcgtcatggccagagaa
cactctccttccatcatcttcatggatgagatcgactccatcggctcaactcgcctggag
ggcggctccggcggtgacagtgaggtgcagaggacgatgttggagctgctcaatcaactg
gacggtttcgaggccaccaagaacatcaaggtcattatggccaccaaccgtattgacatc
ttggactcggctctgctgaggccaggcaggatcgacaggaagatcgagttcccgcctcca
aatgaagaggcccgtctggacatcttgaagatccattccaggaagatgaacctgacacgc
ggcatcaatctgaagaagattgcagagctgatgccgggagcgtctggtgctgaagttaag
ggtgtttgcacagaggcagggatgtacgctctgagagaaaggagagtgcatgtcaaccag
gaggactttgagatggctgttgcaaaggtgatgcagaaagacagcgagaagaacatgtcg
atcaagaagctgtggaagtag
DBGET
integrated database retrieval system
