Pseudoliparis swirei (Mariana hadal snailfish): 130203382
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Entry
130203382 CDS
T09868
Symbol
rangap1b
Name
(RefSeq) ran GTPase-activating protein 1b isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130203382 (rangap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130203382 (rangap1b)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130203382 (rangap1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
MctB
Motif
Other DBs
NCBI-GeneID:
130203382
NCBI-ProteinID:
XP_056285477
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Position
13:complement(18868332..18876753)
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AA seq
587 aa
AA seq
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MFARVMAEHLFCKRSHVTMASDDVAQLADVLSKIHVGDGELGFRGSGLKLDDAESVEELI
REMEQYPGLRALRLEGNTLGVDAARAIAKALENQDRLQRCYWSDMFTGRLRSEIPTALRS
LGSALMSAGARLTDLDLSDNAFGPDGVKGIEQLLKSPSCHALQQLRLNNCGMGVDGGKIL
AEALIEGHRQASACGAPLKLRVFIAGRNRLENEGASALAKAFQLMGSLEEVHMPQNGITH
AGVAALAAALQHNPELRVLNFNDNTFTKRGTLAMARALRHLRNVQVINFGDCLVRSEGAV
ALAAVLREGLPVLKELNLSFGEITEAAALVVAQAAADKPDMETVDLNGNSLGEEGCEALR
EAMESMNKGSMLASLSDDEGEPEDEGEDATDDDASDGGSEDDEEDGGVVKENGRTRKDDS
PAKPPSPAEVTTFLSCPSAERLLQLGEMRTSLQQQVDAADPHRAADVLLKIASLYSEDPE
TKAAVFETVDGVLEKLLSGSAYESYRFLSSLLVMMGLLKGEGKMKKVTLVPGQLLCLEHA
IQQEYFLQQHAALLHTFVSKNSGALESCSSASERLSSTLEKKCHDQH
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcacgtgtgatggctgagcatttattctgcaaaaggagtcacgtcacgatggcc
tcggatgacgtcgctcagctggccgacgtgctctccaagatccacgtcggggatggagag
ttgggcttcagaggctcgggtctgaagctcgacgacgcagagtcggtggaggagctgatc
cgcgagatggagcagtacccgggcctgagagcgctgcgtctggaggggaacaccctggga
gtggatgcggcccgggccatcgccaaggctctggagaaccaggaccggctgcagcgatgc
tactggagcgacatgttcaccggaaggttgcgctctgaaatcccgacggccctgaggtca
ctgggcagtgcgttgatgagtgccggcgcgaggctgaccgatctggacctgagcgataac
gccttcgggcccgacggcgtgaaggggatcgagcagctgctgaagagcccgtcctgccac
gcgctgcagcagctgaggctcaacaactgcggcatgggcgtcgacggagggaagatcttg
gctgaagctctgattgaaggccaccgccaggcatcggcgtgcggcgctccactcaaactg
agagtgttcatcgccgggaggaaccgcctggagaacgaaggagccagcgccctggccaag
gccttccagctgatgggcagcctggaagaagtccacatgccccagaacggcatcacccac
gcaggtgtggcggcgttggctgcagccctgcagcacaacccggagctccgcgtcctcaac
ttcaacgacaacaccttcaccaagcggggcacgctggccatggcgcgggctctgaggcac
ctgaggaacgtgcaggtgatcaacttcggggactgtctggtccgctcggagggagccgtc
gccctcgccgctgtcctccgagagggactgccggtcctcaaggagctcaatctgtcgttt
ggggagatcaccgaggcggcggcgctggtggtcgctcaggctgcggcggacaaaccggac
atggagacagtggatctgaacggtaacagtttgggggaggagggctgtgaggctttgagg
gaagccatggagagcatgaacaagggaagcatgctggcgtcgctcagcgacgacgagggc
gaacctgaagacgagggcgaagacgccaccgatgacgacgccagtgacggcgggagtgaa
gacgatgaagaggacggtggcgtcgtgaaggagaatggtagaacgagaaaagacgacagt
cctgcgaaacccccgagcccagcagaggtcacgaccttccttagctgcccctcggcagag
aggctccttcagctgggagagatgaggacgagcctgcagcagcaggtggacgcagccgac
cctcacagggccgccgacgtccttctgaaaatcgcttctctgtacagcgaggacccggag
accaaggcggccgtcttcgaaaccgtcgacggcgtgttggagaagctcctctccggctcg
gcttatgagtcgtaccgcttcctctcctcgctgctggtcatgatgggactcctcaagggc
gaggggaagatgaaaaaggtgacactggtcccaggtcagctgttgtgtttggagcacgcc
atccagcaggagtacttcctccagcaacacgccgcgctgctgcacaccttcgtgtccaag
aacagcggagctctggagtcctgcagcagtgctagtgagcggctgagctccacgctggag
aagaagtgccatgaccaacactga
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