Pseudoliparis swirei (Mariana hadal snailfish): 130203389
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Entry
130203389 CDS
T09868
Symbol
top2a
Name
(RefSeq) DNA topoisomerase 2-alpha
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pswi03032
]
130203389 (top2a)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130203389 (top2a)
Enzymes [BR:
pswi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
130203389 (top2a)
DNA replication proteins [BR:
pswi03032
]
Eukaryotic type
DNA Topoisomerases
130203389 (top2a)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
130203389 (top2a)
Centrosome formation proteins
Centriole proteins
130203389 (top2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
130203389
NCBI-ProteinID:
XP_056285488
LinkDB
All DBs
Position
13:complement(2692407..2705374)
Genome browser
AA seq
1567 aa
AA seq
DB search
MAEPLKQTFENKLVTKTKKDPKRMSVERIYQKKTQLEHILLRPDSYVGSVEPVTQQMWVY
DEEDGLNSRDVTFVPGLYKIFDEILVNASDNKQRDKSMSIIKINIDVENNTISVWNNGKG
IPVVEHKVEKVYVPALIFGQLLTSSNYDDDQKKVTGGRNGYGAKLCNIFSTKFTVETSCK
ESKKTFKQTWYDNMSRTGDSCIKPFDGEEYTCITFMPDLAKFKMTTLDKDTVALMTRRAY
DIAGCSKGVRVFFNGKRLPLTGFRNYVEMYVKDRVDELGAALVVIHEIVNERWEVCLTMS
EKGFQQVSFVNSIATTKGGRHVDYVADQLVSKLIEVVKKKNKAGVAIKPFQVKNHLCLFV
NCLVENPTFDSQTKENMTLQQKSFGSTCSLSDKFIKQATSGGIVESIMNWVQFKAQTQLN
KKCSSVKHSKIKGVPKLDDANNAGGKDSINCTLILTEGDSAKTLAVSGLGVIGRDNYGVF
PLRGKMLNVREATLKQIMENAEINSIIKILGLQYKKNYSTPESLKTLRYGKIMIMTDQDQ
DGSHIKGLLINFIHHNWPSLLRHNFLEEFITPIIKASHKKTQLSFYSIPEYSAWKESQPN
HKSWRTKYYKGLGTSTSQEAKEYFSDMQRHRIPFKYSGPEDDEAITLAFSKKKVDERKVW
LTNFMNNRRERRAHNLPEEYLYSQSTKSLSYNDFINKELVLFSNSDNERSIPCLVDGLKP
GQRKVLFACFKRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIVGLAQNFVGSNNLNLL
QPQGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPVDDNLLKYNVDDNQRVEPEWYLPI
IPTVLVNGAEGIGTAWASKIPNYDVREIVGNIHRMINGDEPLPMLPSYKGFKGTIEQVMD
NQFINTGEVAIIDSTTIEISELPVKTWTQVYKENVLEPMLNGTEKVPPLITDYKEYHTDT
TVRFIVKMATEKLSEAEAAGLHKVFKLQQTVTCNSMVLFDHVGSLNKYESVQAILKDFFE
LRMKYYVLRKDWLVGMLGAESAKLTNQARFILEKIEGSLVIENKPKKELIGMLQQMGYDS
DPVKAWKQAQEKNVEVTEENEEEEEEEDTSGPDYNYLLSMPLWYLTKEKKEELCKQRDAK
TTELNTLKKKSPTDLWKEDLAAFSEELEIVEAKEKEAASMPVVKKGAGKGKAVKVKQETL
PTPQGRRVVPRITSSMKAEANRKAELKKGERKRGKKVKTEDVTVKMEFGDNGENEEPSEE
IGLAARLEKKPRSQAKEKEASKSGRQSTLQFKPVAKTTKKNPWSDEESDANLSDNEMESE
EEVVAPRERADRKTKAAVKYSVSDSESEFDDWGKKDAPKRRAVISDDEDSFVPEPTADSD
LDSPAPPPKAPEPEKKTAKGKMPVKQATTKSSSQSDDQLPAPKAAPVQRKKEAAPKKAAA
RKPAASKKAVADVKQPSILDALSKSKTAKISFDSSDSESEAKAPPPKPKQVLKRKHVVGD
DSDSSSDDLMSRLKAKTTASKKTKNWDEDDSFQVSDLDAGATPVAAREKPARARKPVTYT
QDSDDDF
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccactgaagcaaaccttcgaaaacaagctggtgacgaagacgaagaaggat
ccgaagcggatgtcagtggagaggatctaccagaagaagacgcagttggaacacattttg
ctccgaccggactcctacgttgggtcggtagagcccgtcacccagcaaatgtgggtgtat
gatgaggaggacggactgaactcccgcgatgtgacgtttgtgcccgggctttacaagatt
tttgatgagatccttgtaaatgcatctgacaataaacagagggacaagagcatgtcaatc
atcaagatcaacatagatgttgagaacaacaccatcagtgtgtggaataatgggaagggt
atccctgtggtggagcacaaagtggagaaggtctatgtgcctgctctcatctttggacag
ctcctcacctccagtaactacgatgatgaccagaagaaagtcactggtggacgcaatgga
tatggtgcgaagctttgcaacatcttcagcacaaagttcactgtagagacttcctgtaaa
gagtcgaagaagaccttcaagcagacttggtacgacaacatgagcaggacgggggattcc
tgcatcaaaccttttgatggagaggaatacacttgcatcaccttcatgccggacctcgcc
aagtttaaaatgaccaccctggacaaagacacagtggctctgatgaccaggagggcgtac
gacatcgctggatgctccaagggcgtccgcgtgttcttcaatggcaaaaggctgccactc
acaggtttccgtaactacgtggaaatgtacgtgaaggaccgggtagacgagctcggcgcc
gccctcgtcgtgatccacgagatcgtcaacgagcgctgggaggtctgcctcaccatgagc
gagaagggtttccagcaagtcagctttgtgaacagtatcgcgacaaccaagggagggagg
cacgttgactacgtcgctgaccagctcgttagcaagctcattgaagtggtgaagaagaag
aacaaagccggggtggccatcaagcctttccaggtgaagaaccacctgtgtctgtttgtc
aattgcctggtcgagaacccgaccttcgactctcagaccaaagagaacatgacgctgcag
cagaagagctttgggtccacttgttctctcagtgacaagttcatcaagcaggccacttcc
ggtgggattgtagaaagtatcatgaactgggtgcagttcaaggcgcagacccagctgaac
aagaaatgttcaagtgttaagcactcaaaaatcaaaggggtcccgaagctggatgacgcc
aataatgcaggcgggaaggactccatcaattgcacgctgatcctcaccgaaggagactcg
gccaagacgctcgccgtgtctgggctgggagtcatcggcagggacaactatggcgtcttc
cctctcagaggaaaaatgctcaacgtccgggaggccacactcaagcagatcatggagaac
gcagagatcaacagcatcattaagatcctcggccttcagtacaagaagaactacagcacc
ccagaatccctcaagactctgcgctatggcaagatcatgatcatgaccgatcaggatcaa
gatggctcccacatcaagggccttctgatcaacttcatccaccataactggccgtcactg
ctgcgccacaacttcctggaggagttcatcacccccatcatcaaggcatctcataagaaa
actcagctgtctttctacagtatccccgaatacagtgcatggaaggaaagtcagcccaac
cacaaatcttggagaacaaaatactacaaaggtttgggaaccagcacatcgcaggaagcc
aaggagtacttctctgatatgcagagacaccgtatcccattcaagtactctggacctgaa
gatgatgaagctatcacccttgcctttagcaagaaaaaggtggacgagcgtaaagtgtgg
ctgaccaacttcatgaacaacaggcgtgagcgccgggctcacaacctgccggaggagtac
ctgtacagccagtccaccaagtccctctcctacaacgactttatcaacaaggagctggtg
ctgttctccaactctgacaatgagaggtccatcccctgcctggtggacggactgaagccg
ggccagaggaaggtgctattcgcctgcttcaagaggaacgacaagcgggaggtgaaggtc
gcccagttggccggctcggtggccgagatgtcggcctaccaccacggagaggtctctctg
atgatgaccattgtgggtttagcccagaactttgtgggaagcaacaacttgaacctgctg
cagccccagggtcagttcggaaccaggttgcacggtggcaaggactctgccagccctcga
tacatcttcaccatgctcagcccgttggcccgccttcttttcccacccgtggatgacaac
ctgctcaagtacaacgtcgacgacaaccagcgcgtggagcccgagtggtacctgcccatc
atccccaccgtgctggtgaacggcgccgaaggtatcggcacggcctgggccagcaaaatc
cccaactacgacgtccgggagatcgtcggcaacatccaccgcatgatcaacggcgacgag
cctctgcccatgcttccaagctacaaaggcttcaaaggcacgattgagcaggtgatggac
aaccagttcatcaacactggagaggtggccatcatcgattccaccaccattgagatctcc
gagttgcccgtcaagacctggacgcaggtgtacaaggagaacgtgctggagccaatgctg
aatggcacagagaaggtcccgcctctgatcacggactacaaggaataccacaccgacacc
actgtgcgattcatcgtcaagatggcgacggagaagctgagtgaggccgaggctgccggc
ctccacaaagtcttcaaacttcaacaaaccgtcacttgcaactcgatggttctgtttgac
cacgtgggcagcctgaataagtacgagtctgtgcaggccattctcaaggacttctttgag
ttgaggatgaagtactacgtgctgaggaaggattggttggtcggcatgctgggggccgag
agcgccaagctcacgaaccaggcccgcttcatcttggagaaaatcgagggcagcttggtc
atcgagaacaagccaaagaaggaacttatcggcatgttgcagcagatgggctacgactct
gacccagtcaaggcgtggaaacaggcccaagagaagaatgtggaagtcacagaagaaaat
gaagaagaagaggaggaggaggacaccagcgggcccgactacaactacctgctcagcatg
cccttgtggtatttgaccaaagaaaagaaagaagagctgtgcaagcagagggatgctaag
acgacggagctcaacaccctgaagaagaagtctccaacggacctgtggaaggaagacctc
gctgcgttctctgaggaactggagatagtcgaggcgaaagagaaggaggctgccagcatg
cccgtcgttaaaaagggagctggaaaaggcaaagcggtgaaggtgaagcaggagactctg
cccacgccccaaggtcgccgcgtcgtgccgcgcatcaccagctctatgaaggccgaagcc
aacaggaaggctgagctgaagaaaggagaacgcaagaggggcaaaaaagtcaagactgaa
gacgtcacggtgaagatggagtttggagacaacggcgagaacgaggagccgagcgaggag
atcggtttggccgcacggctggaaaagaaaccgagaagccaggcaaaggaaaaagaagca
tcaaagtccggcaggcagagcacgcttcagttcaagcccgttgccaagacgaccaaaaag
aacccgtggtcggacgaggagtcggacgccaatctgtccgacaatgaaatggagtcggag
gaggaggtggtggcccccagagagagggctgaccgcaagactaaagccgcggtgaagtac
agcgtgtccgacagcgaaagcgagtttgatgactgggggaagaaggacgctccgaagcgg
agagccgtcatcagcgacgacgaggatagcttcgtcccggagcccacggccgacagcgac
ctggactcacccgccccacctcccaaagctccagaaccagagaagaaaacggcaaagggc
aaaatgccagtgaaacaagcgacgaccaagtcgagctctcagtccgatgatcagttgcct
gcacccaaggctgctccagttcagcgtaaaaaggaggctgcacccaaaaaagctgctgcc
aggaaaccagctgcgtctaagaaggcggtggcagatgtgaagcagccgtccatcctagat
gctctttccaagtccaaaaccgccaagatttcatttgactccagtgactctgagagcgaa
gccaaagctccgcctccaaagcccaaacaagtgttgaagagaaagcatgtcgtaggcgac
gactctgacagcagctcggacgacctcatgtcacgtctcaaggccaaaactactgccagc
aagaaaaccaagaactgggatgaggacgacagcttccaggtttcagacctggatgcggga
gccactcccgtggcggcgcgagagaagcccgcacgcgcacggaaacctgtaacctacacc
caggactcggatgacgacttttaa
DBGET
integrated database retrieval system
