Pseudoliparis swirei (Mariana hadal snailfish): 130203414
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Entry
130203414 CDS
T09868
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A
KO
K14005
protein transport protein SEC31
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130203414 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130203414 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pswi02044
]
130203414 (sec31b)
Membrane trafficking [BR:
pswi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130203414 (sec31b)
Secretion system [BR:
pswi02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
130203414 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_EIPR1
EIF3I
TPR_Sec16
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_DCAF4
Prp18
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
130203414
NCBI-ProteinID:
XP_056285531
LinkDB
All DBs
Position
13:complement(5896363..5910532)
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AA seq
1205 aa
AA seq
DB search
MRLKEIQRTAHQAWSPAQHHPIHLAFGTSAQQLDASFNTTAALEIFEVDFSDPSLDMQLK
GSLPTSNRLHSIVWVDFGMGADGTGGRLIGGSENGTLTVYNPEVIMSSGADAVVGQSDKH
TGPIRALDFNPFQSNLLASGANDSEIYIWDLNNFNSPMTPGAKTQPAEDISVVSWNRQVQ
HILASASPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPDVATQLVLASEDDRMPVI
QMWDLRFATSPLKVFENHTRGILSISWSQADSELLLSSAKDNRILCWNPNTGEVIYELPT
INQWCFDVQWCPRNPALLSAASFDGRITVYSVMGGSLKAQQQSTADKISSSFDSMDPFGT
GQVLPPLQAPQPAVQDTIVSPLKKPPKWVRRPVGASFAFGGKLITFENPKLPSVQSPQPV
LRQVFMSQVTTETEFLQRSRELQAALQSGSFNNYCQAKIQSAKSDAEQDIWKFLLVNFED
EARVKFLRLLGFSKDDLEKKISKCLGKSFQPNGHGVDAKDLAEKMQRLSTERSHVATAVG
DARTSGSVSPADFFTQSPKENSIFQIPVSCDTDGLISQSLLVGNFEGAVDLCLNDGRYAE
AILLSISGGEELLKKTQQKYLSSQKNSISMLISSVVTQNWRDIVKGCELDNWKEALAALL
TYAHPEDFARLCDTLGGRLEHERTEKRCLQACLCYICSGNIEKLVECWAMHRDCSSPLGL
EDLVEKVMMLRKSIERLRNSEVEIQSPILAEKLTCYAGILAAEGSLAIAMTYLPANSDQA
GITMLKDRLFHAQEEAAVGQHHPTSLNRVNVPTAKPTPAAQPPTPKAQITSQYQPSAPSQ
AAQQQPPMPSIFTPQAPPGLPPFSHVLPPSGTCPALRPSYPQHPAPAPGFLPHQPFQPQP
RAVGGPSGFLPPGPSMPSANLSGPSLPPPSSTSGGLFAMPSPGVPPTSFMPFNSSPTGPM
PPSSQPGAPVPMYPGSLHNQGPAPPMASGPYAPLGSGYPQGGPGAPAAKPFMAPAVAPPT
TGPQEGWNDPPALRSGSRKKVPDNYTPPTPITTPVMGFPVEAPQPLNHAQVPPGAPQEPS
VQLLQQLPAERVEQKEIPADHMVLKSTFDSLVQRCQLAAGDPQTKRKLDDAGKRLGYLYD
KLREQSLSDNILTGLHEISSCVASQNYQRGLEVHTQVVSNSNFSESSAFMPILKVVMTIA
NKLGV
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaaggagatccagaggactgcccaccaggcgtggagtcctgcccagcaccac
cctatccacctggccttcggaacatcagcacaacagctggatgcctctttcaacaccaca
gctgccctggagatatttgaggtggatttctcagatccatctctggacatgcagctcaaa
gggtcattacccacctcaaacaggttgcacagtatcgtatgggtggattttggaatggga
gctgatggtactggagggagactgattggcggcagtgaaaatggcacattaaccgtatat
aacccggaggtcataatgagctccggtgcagatgcagtagtggggcagtctgacaaacac
acaggacctatcagagcactcgatttcaacccttttcagagtaatctcctcgcttcagga
gcaaacgattcagagatatatatctgggatctgaacaactttaacagtccaatgacccca
ggagcaaagacgcagcctgctgaagacatcagtgttgtgtcctggaaccggcaggttcag
cacatcctggcctctgccagccccagtgggaaagcagttgtgtgggatctgagaaagaat
gagcccatcatcaagatcagtgaccacagcaacaggatgcactgttcaggaatgctctgg
cacccggatgtggccactcagttggtgctggcctctgaagatgaccgaatgccagtcatc
cagatgtgggacctccgttttgccacttcgccccttaaagtctttgaaaaccacacgagg
gggattctgtctatatcctggagccaggcagactctgagctcctgctgagtagcgctaaa
gacaacagaatcctctgctggaatccaaacactggagaggtcatctatgagcttccaaca
ataaatcagtggtgtttcgatgtccagtggtgccccaggaatccagccctcctttcagcc
gcctcatttgatggcaggatcactgtctactccgttatgggaggaagcttgaaggctcag
cagcaaagcacagctgataagatatcctcttcatttgattcaatggacccctttgggaca
gggcaggtgctcccccccctgcaagcccctcagcctgcagtgcaggacaccatagtttcc
cctctgaagaagccacctaagtgggtgcgcaggccagtgggcgcttcctttgcttttggt
ggaaagctgataacatttgagaatcccaagctgccttcagtgcagagcccccaaccggtc
ctcagacaagtgtttatgagccaggttaccacggagacagagttcctccagcgctccagg
gagctgcaggcggcgctgcagtcgggctccttcaacaactactgccaggccaagattcag
agcgccaagtcagacgctgagcaggacatatggaagttccttctggtgaactttgaggat
gaagcccgcgtaaaattccttagacttttgggttttagcaaggatgacctggagaaaaag
atttcaaaatgcctggggaagagttttcagcccaatggacatggagtggatgccaaagat
ctggcagaaaagatgcagcggctctccaccgagaggtctcatgtggcaactgctgtcggt
gatgccagaacctctggttctgtttccccggcagacttctttactcagtctccaaaggaa
aactcaattttccagatccccgtttcgtgcgacaccgatggtttgataagccagtcgctg
ctggtcggtaactttgagggagctgtggatctgtgtctaaacgacggccgttacgccgaa
gccatcctcttgtccatcagtggaggggaggagctgctcaagaaaactcaacaaaaatac
ctaagcagtcaaaagaacagcatttcgatgctcatctcatcagtggtgacccagaactgg
agagacatagtgaagggctgtgagttagacaattggaaggaggctctcgctgctctgctg
acttacgctcaccctgaagattttgcccgtctgtgtgataccctgggaggtcgattggag
catgagaggacggagaagcgctgcctgcaggcctgtctgtgctacatctgctctgggaac
attgagaagctcgtggagtgctgggccatgcatagagactgctcctcccctcttggtcta
gaggatctggttgagaaagtcatgatgctgcgtaagtcaatcgaacgcctccgcaacagc
gaggtggagatccagagccccatcctggccgagaagctaacctgctacgctggcatcctg
gctgcagagggcagtctggccattgccatgacatacctgcctgcgaactcggaccaagcc
gggatcacaatgctaaaagaccggctgttccacgctcaggaagaggctgccgttggacag
caccatccaacctccctcaacagagtcaatgtgcccacagccaagcccactcctgctgct
cagcctcctaccccaaaagcacaaattacgagtcagtaccagccctctgctccttcccag
gctgcccaacagcagcctcctatgccttcaatttttacccctcaggctccacctggtttg
ccgcctttttctcatgtgctgccgcccagtggaacctgccctgccttgaggccttcttac
cctcaacaccctgctccggctccaggtttccttcctcatcagccattccagccccagccg
agggctgttgggggaccctcaggcttccttcctccaggtccttccatgccatctgctaac
ttatcaggaccttctctaccacctccgtcatcgacctctggaggcctgttcgccatgccc
agccccggggtgccaccgacgagcttcatgccgtttaactcttcgcccacgggccccatg
ccgcccagctcccaacccggagccccggttcccatgtacccagggagcctccacaaccag
gggcctgcacccccgatggcatctggtccctatgcccctctcggatcagggtacccacag
ggaggccccggagctcctgctgcaaagcccttcatggccccggctgttgctcctcctact
acaggaccccaagaaggctggaatgacccaccggcattacgaagtggatccagaaagaag
gtccctgataactacactccaccgacccccatcaccacccctgtgatgggattccctgtg
gaggctcctcagccactcaaccatgcccaagtcccccccggagccccccaggagcccagc
gttcagcttctccagcaactgccagccgagagggtggagcagaaagaaatccctgctgat
cacatggtgctgaaatccacctttgacagtctggtgcagcgctgccagctcgcagcggga
gacccacaaacaaaaaggaaacttgatgatgccggcaaacgtttgggatacctgtatgac
aagctgagagagcagtcgctctctgacaacatcctgaccggactccacgagatcagctcc
tgtgtggcgagccagaactaccagcggggtctggaggtccacacccaggtggtcagcaac
agcaacttcagcgagagctccgccttcatgcccatcctcaaagtggtcatgaccatcgcc
aacaagctgggcgtctaa
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integrated database retrieval system
