Pseudoliparis swirei (Mariana hadal snailfish): 130203420
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Entry
130203420 CDS
T09868
Symbol
mybpc2b
Name
(RefSeq) myosin binding protein Cb isoform X1
KO
K12558
myosin-binding protein C, fast-type
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130203420 (mybpc2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130203420 (mybpc2b)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130203420 (mybpc2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
THB
FN3_DSCAM-DSCAML_C
V-set
C1-set
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
130203420
NCBI-ProteinID:
XP_056285542
LinkDB
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Position
13:complement(1554096..1575782)
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AA seq
1134 aa
AA seq
DB search
MPEPVPAEKPEGPEESAEEEPLLPDGAYSDGDDAKANPAEEENMSTELTGLFVEKPKENL
DVVVGSDLTIIAKVDSTNLTRKPTMKWLKGKWMDLGSKAGKHMQFKETYDRNTKIYTYEM
KIIKAKVGHAGVYRCEVTVKDKCDSSSFEISVEASQQEAQADIFSAFKRSDAGEDDGDLD
FSALLKTAKKRKVKEEPVIDVWELLKNAHPSEYEKIAFEYGITDLRGMLKRLKKMKVVEP
KHCEAFLKRLENCYSVEKGKKIVLRCEVVDPNVTVKWLKNGQEIKPSAKYIMETNGNVRT
LTINKTSLADDAAYECVVGEEKCFTEIFIKEPPVTITKLMDDYHVVVGERVEFEVEVSEE
GAHVMWFFEDIELVKDKDSTKYRFKKDGKKHTLIIQEATLEYIGMYHAWTNGGHTKGELE
VEEKQLQVLQDIADLTVRATDQALFKCEVSDDKVTGKWFKDGVEVLPTERIKMTHIGRFH
RLLIENVKPEDAGDYTFIPDGYALSISAKLNFLEIKVDYVPRQDPPKIHLDTSGNMVSQN
TIIVVAGNKLRLDVEITGEPAPTVVWTKGDQPITATEGRIRVEARKDLSCFVIEGAERED
EGNYTICVNNVAGEDKAMLFVKIVDVPDPPENLRCTSVGEDCASIIWDPPAFDGGVPLKG
YLMERKKKGSSRWTKLNFDVYEASTYEAKRMIEGVMYEMRVFAINSIGMSQPSLSSKPFM
PIAPTSEPIRLNVHDVTDSTCTLKWQAPEKIGAGGLDGYIIEYCKEGGTEWEVANQELCE
KQGFVVRGLPVGEKINFRVKAVNIAGHSPPAVLSQPVTIREIMEYPKIRIPRELRTKYVR
KVGEKINLTIPFQGKPRPVATWFKDGEPIDPKMVNVRSTNVDTILFIREAEREHSGTYEL
VLKIENMEDRASLVIRIVDKPGPPTKMKVTDVWGFNAALEWEAPKDDGNCEIIGYTIQKA
DMKTKEWFTVYEHNRRTNCTASDLIIGNEFMFRVYSENLCGLSDEAGPSKNTAVIAKTDL
AHKRSPFKEKDTSCVPKFTQPLIDRSIVAGYSTTISCSVKGYPKPKIVWMKNKMIIGQDP
KFLMRNNQGVLTLNIRKPGTFDGGKYSCMAVNELGTDEVECKLDIRVATDPDKK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagccagtccctgcagagaaaccggagggtccggaggagtcagcggaagaggag
ccactcctaccagatggagcatattcagatggtgacgatgcaaaagcaaaccctgcagag
gaggagaacatgtcgactgagctcaccgggctcttcgtcgagaagccgaaagaaaatctc
gatgttgttgtaggatcggatctcactatcatagccaaggtggattccaccaacctgacg
agaaaacccaccatgaaatggctgaagggaaagtggatggacctcggcagcaaggctgga
aaacatatgcagtttaaagaaacctacgacaggaatactaagatctatacttatgaaatg
aagatcatcaaggcgaaagtcggacatgccggggtctacaggtgtgaagtcacggtgaaa
gacaagtgtgacagctccagctttgagatctccgtggaggcttcacagcaggaggcgcag
gcagatatcttctctgccttcaagagatcggatgctggagaggacgacggagatctggat
ttcagtgctctgctgaaaaccgcaaagaagaggaaggtgaaagaggagccggtgatcgac
gtgtgggaattgcttaagaacgcccatccgagcgagtatgagaaaattgcctttgagtat
ggcatcactgacctgaggggcatgctaaaacgcctgaagaagatgaaggtcgtcgagccc
aagcattgcgaggctttcctgaagaggctggagaattgctactcagtggaaaagggcaag
aagatcgtcctgagatgtgaggtggtcgatcccaacgtgacggtcaaatggttgaagaat
ggccaggagatcaaaccctcagccaagtacatcatggagaccaacgggaatgtccgaaca
ctcaccatcaacaagacgtccctggctgacgacgctgcgtatgagtgcgtggtcggagag
gaaaagtgtttcacagagatcttcatcaaagagccccctgtgaccatcaccaagctgatg
gatgactatcatgtggttgttggagagagagtggagtttgaggtcgaggtgtcggaggag
ggcgcccacgtcatgtggttctttgaggatatcgagctcgtcaaagacaaagactccacc
aagtatcgcttcaagaaggatggaaagaagcacacgctcatcatccaggaggccacgctg
gaatacattggaatgtaccatgcttggacaaacgggggtcataccaaaggagagctggag
gtggaagaaaaacaactgcaggtgttgcaggacattgcagatctgaccgtcagggcaaca
gaccaggctctgttcaagtgcgaggtgtccgacgataaggtcacaggaaagtggttcaaa
gacggcgtggaggtcctgccaaccgaacgcatcaaaatgactcacatcggaaggttccat
cgtctgcttattgaaaatgtgaaaccagaggatgctggagactacacatttattcctgat
ggatacgctctgtccatatctgccaagctcaacttcttggaaattaaggtcgactacgtg
ccaagacaagatcctccaaagatccacctggacaccagcgggaatatggtctcacaaaac
accatcatcgtggtggcaggcaacaagctccgcctggatgtggagatcacaggagagcca
gcacccaccgtcgtgtggaccaaaggagaccaaccaatcacagccaccgaagggcgcata
agggtggaggccaggaaagacctgagctgcttcgtcatcgagggggcagagagggaggat
gagggcaactacaccatctgtgtcaacaacgtggccggagaggacaaggccatgctgttt
gtgaagatcgtggatgtgcccgacccccctgagaacctgagatgcacatcggtgggagag
gactgtgccagcatcatttgggatcctcctgcgtttgatggcggcgtaccactcaaaggt
tatctcatggagaggaagaagaagggctcctccagatggacgaagctcaactttgatgtc
tatgaagcgtcgacatatgaggccaagaggatgattgaaggcgtcatgtatgagatgagg
gtgtttgccatcaacagcatcggcatgtctcagccaagtctcagctccaagcccttcatg
ccgatcgccccgactagcgagccgatacgcctgaacgtgcacgatgtgaccgacagcacg
tgcaccctgaagtggcaagcccccgagaagattggagctggaggcctggatggctatatt
attgaatactgcaaagaaggaggcactgagtgggaggtggcaaaccaggagctttgtgaa
aagcagggatttgtggtgcgtggcctccccgtgggagagaagatcaacttcagggtgaag
gccgtaaacatcgccggacacagtcctccagctgtgctgtcgcagcccgtcaccatccgc
gagatcatggagtatccgaagatccgcatccctcgcgagctgaggacaaagtacgtcagg
aaagttggagaaaagatcaacctgaccatccccttccagggtaagccacgtccggtcgct
acctggttcaaagacggtgaacccattgaccccaagatggtcaacgtccgcagcacaaac
gtggacaccatcctcttcatccgcgaggcagagcgagagcactccgggacgtacgagctg
gtgctgaagatcgagaacatggaggaccgggccagcctcgtcatcagaatagtggataaa
cccggacctcctacgaagatgaaggtgacggacgtctggggcttcaacgcggctctggag
tgggaagcccccaaggacgacggcaactgtgagatcattggatacaccatccagaaggcg
gacatgaagacgaaggagtggttcaccgtgtacgagcacaacagacgcacaaactgcacg
gcgtccgatctgatcattggcaacgagttcatgttccgcgtctacagcgaaaacctctgc
ggcctgagcgatgaggccggcccgagcaagaacacggcggtcatcgccaagacggacctg
gcccacaaacgaagccccttcaaggagaaagacacgagctgtgtgcccaagtttacccag
cctctgattgacagatccatcgtggccggttacagcaccaccatcagctgctccgtgaaa
ggctaccccaagcctaagattgtctggatgaagaacaagatgatcatcggtcaggatccc
aagttcttgatgcggaacaaccagggagtgctgaccctcaacattcgcaagccgggcacc
ttcgacggaggcaaatactcctgcatggcggtcaacgagctgggcacggacgaagtggag
tgcaagctggacatccgagtggccacagacccagacaagaagtga
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