Pseudoliparis swirei (Mariana hadal snailfish): 130203451
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Entry
130203451 CDS
T09868
Symbol
faap100
Name
(RefSeq) Fanconi anemia core complex-associated protein 100
KO
K10993
fanconi anemia core complex 100 kDa subunit
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130203451 (faap100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130203451 (faap100)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
130203451 (faap100)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCAA
Motif
Other DBs
NCBI-GeneID:
130203451
NCBI-ProteinID:
XP_056285602
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Position
13:complement(16937254..16944201)
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AA seq
863 aa
AA seq
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MEGRCAVETWAEFGCSGSSRTPRLKCSFGTDVFLCTGNDQIYVFSSQERKLTAVIECPGP
VTDILQSHDQQFLYVACSSGVYCVGSQFLSSRAPSSPADASSSPAEVKMSPEFLAVPEEG
VLSLLLVGSVLLTLSQRDASWILTLYRSSNYEMLRSLSLPLVSGDTAGKTGMRRRPLLIC
VHSSAVAAPPSPPSTPEVSGVGGDGHLCLEPVLFKLLFGIDAALAKSPVVLCGLPDGCLC
FLPLRPPAPRLKVLHSLEQPVAFIGVSGGATDAGPGHARCLVAVGERGRVVLIKSEKGGG
GNRTVFIEGCVQGPVMCGCVDATRLYYSTGSDLLALDLSEVSSERDGHGGDVETSGVAAA
LRSPASLNVCRVVALAEPTRNTAGEVQLLGLSVRGQLQRITVPVEREDAGLPGGPSTRGG
RSVRDLLSAIGDVCERASVLKTAIKSQNQILRRLNQVLNISFLLLAGGTNTEERLPSQEK
PIRCRATASWSRLLQRDSLNLTCVLENSSPYVLERGWTLSIAVLPLSRPPGAGTRSSSSS
ASFPFHSLPPGETFEASLPLAAAGEASFPVTVSCSLVFSLGGLLGEDAEHLPGPRISCVS
LPLSTLTVDWLHALQVCSPISTHGKAASQSHNATDAVDAFLRARRVSSGRGGGGGERERE
RGRHSASVRVSSELLRDALAAKGSDLDTRGSSKAAALNVGLSLLEWLLSDAPGGVAAGRR
GDHVAPGGGGSVVRGHDPNGHAVQLTAKEVNVGEESTAKGEEPLRAVEVLVESSSLAAVC
GLHHALLRRIQALLHTAPERAASPKRIQSLRLREALQRAERLLQQIRQSRISGAFGGGVS
TGPMTQSLLSVYQELRENPLLIM
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggaaggacggtgtgcggttgagacttgggcagagtttggctgttcgggatcatcacgc
acaccgaggctcaagtgtagctttggtacagatgtgttcctctgcactggcaacgaccag
atctatgtcttcagttcccaggaaagaaaactcacggctgtcatcgagtgtcctggaccc
gttactgacatacttcagagtcatgaccagcagttcctctacgtggcctgtagcagcgga
gtttattgtgtcggctcacaatttctgtcatccagagctccaagctccccggctgacgcg
tcctccagtccagctgaagtgaaaatgtcccctgagtttctcgcggttccagaagaaggc
gtgttatcgctgctcctcgtcggctccgtcctcctgactctatctcagagagacgcgtcc
tggatcttgactctttacagatcctcaaactacgagatgctgcgttcactcagtctaccg
cttgtctcaggcgacaccgcgggaaagacgggcatgagaaggaggcctctgctgatttgc
gtccattccagtgctgttgcagcgccgccatctcccccgtccacgccggaagtaagcggc
gtaggcggcgacggccacttgtgcctcgagccggtcctcttcaaacttctgtttgggatc
gacgccgccctcgccaagtcgcccgtcgtcctttgcggcctgccggacggctgcctgtgt
ttcctccctctgcggcccccagcgccgcggctcaaagtcctccacagcctcgagcagccc
gtcgcgtttatcggagtgtccggcggtgccacggacgctggtccgggacatgcgcggtgt
ttggtggcggtgggtgaacgagggagagttgtgttgataaaatcagagaagggaggaggg
ggcaacagaaccgtttttattgaggggtgcgtacaggggcctgtgatgtgtggctgtgtg
gatgcaacgcgtctgtactacagcaccgggtccgacctgctggcgctggatctatcggag
gtctcgtcggagagggacggccacggaggcgacgtagagacatccggcgtggccgccgcc
ctccgaagccccgccagcttgaacgtgtgcagagtcgtcgccttggctgagccgacacgc
aacactgcaggggaagttcagctgctgggactgtcggttagagggcagctccagaggatt
accgtacctgtggaaagagaggatgcaggattgcccggggggccttccacacgggggggc
cgcagtgtcagggacctcctgtccgctatcggagacgtctgtgaaagagcatcagtgctg
aaaactgccatcaaatcccaaaatcaaatcctgaggcgcctgaatcaggtgctcaacatc
agcttcctgctgctggccggcggcacaaacaccgaagagcgtcttcccagccaggagaag
ccgatcagatgtcgcgccacggccagctggagccgattactccaacgagactccctgaac
ctgacgtgcgtcctggagaattcaagtccgtacgtcttggagcgcggctggacgctgagc
atcgccgtgctgcctctgtcccgtcctcccggcgcagggacgcgcagctcctcctcgagc
gcctccttcccgttccacagtctgcctccaggtgagacgttcgaggcgtcgctgcctcta
gcagctgcgggcgaagcgtccttccccgtgacggtgagctgctcgctcgtcttctcgctc
ggcggcctcctgggcgaggacgccgagcacctccccggcccgcggatcagttgcgtcagt
ctgcccttgagcacgctgacggtggactggctgcacgccctgcaggtgtgtagtcccatc
agcacccacgggaaggccgcgtcgcaatcccacaacgcgacagacgccgtagacgctttt
ttaagagcacgaagggttagcagcggaagagggggaggaggaggggagagagagagagag
agagggcggcattcagcgagcgttcgggtgtcgtcagagttgctgagggacgctctggcg
gcgaaaggctctgatctggacactcggggctcctcgaaggcggccgctctcaacgtgggc
ctctctctgctggagtggctgttgtctgacgcgcccggaggcgtcgcagccggacgccga
ggagaccacgtcgcacccggcggcggcggctcggtggtccgtgggcacgatccaaacgga
cacgcggtccaactgaccgccaaagaggtgaatgtaggggaggagtccacggcgaagggg
gaggagcctctgagggctgtggaggtgctggtggagagctcttccctggcagcagtgtgt
gggctgcatcacgctctgctgcgacgcattcaggctctgctgcacacggcccctgagaga
gctgcttctccaaagaggatccagagtctaaggttaagagaggctctgcagcgggccgag
cgcctgttgcagcagatccggcaaagtcgaatctcaggggccttcggtgggggcgtgtcc
acggggccgatgacccaatcacttctctccgtttaccaagaactcagagaaaaccctctc
ctgataatgtaa
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