Pseudoliparis swirei (Mariana hadal snailfish): 130203464
Help
Entry
130203464 CDS
T09868
Symbol
med1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130203464 (med1)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
130203464 (med1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
130203464
NCBI-ProteinID:
XP_056285626
LinkDB
All DBs
Position
13:complement(4522464..4532679)
Genome browser
AA seq
1836 aa
AA seq
DB search
MATGPVVSMQSGSPARELSVSVQHGGNQTHGDRVKPEDATESEKQSRMAALLEKLHAKHN
VSRPWQETCKVVRQAMEKRGVMNAAGHQLLLTCLETLQRALKVSSLPSMTDRLESIARQN
LLGSHLSPSGTECYITSDMFYVEVQLDTNGQLVDVKVAHQGENPTSCPELIQHLREKNFE
EFSKHLKGLVDLYKLPGDNKLKTKMYLALQSLELDLTKMMHMFRLATNATAVETILHGNV
GLLTARSGGHLVSLQCYLSPYDIFEEVPSTQLNSPDGSVPRSLGVSVSVTIEGTAAVYML
PIAPLITGSHPVDNKGMPSFSAVTNSNCVDLPACFYLKMNRPMPFSLSFIQRLGNATLIP
VFESPPSLSPLYQLIVQSQRQLLEGSSSTPPPSRNMHFYSMLPDQQHCYFVNSDAPVQDG
RALQGALVSKIPFSHPAQVALLLDIIRHQAAYNTLVASCVKRTSIKEVSAGLLQFEVCPL
TDSSFSVSFQHPVNESLVCVVMEVIDSRQVSCKLYKGLSDALICTDEFITKVVQRCMSIP
VTMRAIRRKAETIQADTPALLLIAQTVEIMVKNNLPPSGSPTYNMAAGDGTNPMGLPGLA
GGNTPTETGTPAGPNFGGPINTLFGVSRTERQAQGGEGQTQGGVAGQQQSQQQQQQQQQQ
QAGQGHLDDFNKVTQNPILTSLLQITGSVGSSPSSQNAPPPHQTPPPTSSPASNTKNHPM
LMNLLKDNPTQDFAALYGSSPLERQNSSSGSPRTESMGGACPGGSTKGKKKRPRGTEKGG
VMPGTAAAGAVGGLGMKSQQGSSMPQHHQHHQVSHEDDFHRELLSMDVDASQNSIFDVNL
TGDGLDTPHSITPAPSQCGTPPSGPSMPYSQSHVQSQQQQPPGAVPPRMVRLSSSDSIGH
DIIEILSDLPEQTGKGSGGSHGQHPMGNGGEDGGPLGTPIRDSSSSGQGSAVFDSADIFN
SNENPFTDAADLIAEATAATPTSDSSSTNFPDAADFNPDLLTSGHGYFDDSSPSADGDMD
LVKGFGESSQQNSPSGTPQNPTPDGQGTPEKDPFDIGIVFGGNSGSGKPLLGQAPDLGDA
HGGGSQSPLIMGLAAACAEFKSAEPKMKQQQGLMRPKDENGGSGGSSSGMGMGSSLTEVK
QVKRSRTPSSEGKSKEKPPKRKKMDPDGKSPSHSSGGRPYTPPSGGSGSGGSISGGGSKS
PGSSGRSQTPPGGATPPIPKITIQIAKGTITGGKTSSHSGYTSSSSATSSTGGAGGTSSS
KSHHSHSSSSGKIKSKEGSTTQGSSSKPGTTGIGIGSGSGSSQSKGSSQGMGVGKPGSSP
ITKHGLSGPGGSGSGMGSGSKMKPQGGKPPGSLMNPNIKPNISPSHSRSGSSGDKLSSPM
KMQQSQVPGTPPSSKAKSPMGSGGASSGGSKSSGGGMSSQKPMGGSSSGSTSSSSSSSSS
SGSMAFSGGSQSQYGGGGSGGGGGGGGTGGGSGSVGSGGGGGSSCGGAGQNNANNPNAKG
KSPSRNKKPSLTAVIDKLKSVGGGGVGEDGCEVGPPAGGTGSGSAPGGGGGGGGGGGGGG
GHGHGNVPSSGPSNLGPSKHGSSSQSGEYKREKSDKEAKAKVSVSGGNSGDKKPTDPKAG
GGSATGLAKIIISKPDGGSPSIKAKVTLQKAGDGSGDSTRPQIPSLKASPLFSGSTPKHD
RSSPSHSRSPGYTPLNQDSESESGGSSVAERSHQNSPSSDDDDQTVRPLPPQDYMGAIPL
SSGEKHKKHKKEKKKQKERERERDRDREREKEKKKSSLSMGPSSHPIKADSWSRSPIAAS
ESSLSMLGSERPSRPSPMYMRNEDDDLMDSALTGNL
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggggcctgttgtttccatgcagagcgggagccccgcgagagagctctctgtc
tcggttcagcatggagggaatcagacccatggcgaccgggtcaaacccgaggatgcgacg
gagtcggagaagcagagtcggatggcagctttactggagaagcttcatgccaaacacaat
gtttcacggccatggcaggagacctgcaaggttgtgcgtcaggccatggagaaacgcggt
gtgatgaatgctgcaggtcaccagctcctgctcacctgcttggagaccctgcagagagcg
ctgaaagtttcatctctgccgtcgatgacggatcgtttagaatccatcgcacgacaaaac
ctgcttggttctcacctcagcccatcggggacagagtgttacatcacatcagatatgttt
tatgtggaggtgcagttggacaccaatggccagctggtggatgtcaaggtggctcatcag
ggagaaaaccccacgagttgtccggagctgattcagcatctaagggagaagaactttgaa
gagttctccaagcatctcaagggactcgtcgacctatacaagctccctggggacaataaa
ctgaaaaccaagatgtatttagcactgcagtctttggagcttgatctcaccaagatgatg
cacatgtttaggttagctaccaatgctaccgcagtggagactattcttcatggcaacgtt
ggcttgctaacagccaggagcggtggccatcttgtctctcttcagtgttacctgtcccct
tatgacatatttgaggaggtgccgagcacacagctcaactcgccagacggcagtgttccg
cgctcgctgggtgtcagtgtttctgtgacaatcgagggaaccgccgctgtctacatgctt
ccaatcgccccactcatcactggatcccacccagtggataacaaggggatgccttccttt
tctgctgtgaccaactccaactgtgtggacctgcctgcttgtttttacctcaagatgaac
cgccccatgcctttctcactctcctttattcagaggcttggaaatgctaccttgatccca
gtgtttgagagcccccccagcctctcacctctctaccagttaatagtccagagccaacgg
cagctcctggaggggagcagctccacgccaccgccctcacgcaacatgcacttctactct
atgttgccagatcagcagcactgttacttcgtgaacagtgatgccccggtgcaagacggc
cgtgctcttcaaggagcgctggtgtccaagatccccttcagccacccagcacaagtagca
ctcttgttggatatcatccgacaccaggcagcctataacaccttggttgccagctgtgtg
aaacgaacttccatcaaagaagtcagtgcaggcctgctgcagtttgaagtatgtcctctt
accgactcaagtttcagcgtctcattccagcatccagtcaatgagtcactagtttgtgtg
gtgatggaggtgattgactccagacaagtatcctgcaaactgtataaaggactgtcagat
gctctgatctgcactgatgaatttatcaccaaggtggtccagcgatgcatgtccatccct
gtaaccatgcgggccatccggaggaaagcagagaccatccaggcagacactccagccctc
ttattaatcgcgcaaactgtcgagatcatggtgaagaataacctgccaccctccggtagt
cccacctacaacatggcagcaggtgacggaacgaaccccatgggactgcctgggctcgca
gggggcaacacacccaccgaaacgggaaccccggcgggacctaattttggaggtccaatt
aatactctttttggggtttcccggacagagaggcaagcccaaggaggagagggccaaact
caaggaggggtggctggccagcaacagtcgcagcagcaacaacaacaacaacaacaacaa
caagctggtcagggccatttagatgacttcaacaaagtcacacagaatcccatactgacg
agcctattacagattactggaagtgtgggctctagccccagctcccagaatgcaccacca
ccgcaccaaactccacccccaacatcctctcctgccagcaacaccaagaatcatcctatg
ttgatgaacttgttgaaagacaaccccacacaggattttgccgctctgtacggttctagt
ccgttagagcggcagaattcttcgtctggctccccacggactgaaagcatgggaggagcc
tgccccggaggcagcaccaaagggaagaagaagcgtccacgggggacagaaaagggtggc
gtgatgcctggaaccgccgcagccggtgcagttggcggtttaggcatgaaatcacaacag
ggatcttcgatgccgcagcatcaccagcaccatcaagtctcgcacgaggacgacttccac
cgcgagcttctctccatggatgtggacgcatctcaaaattctatctttgatgtgaacctg
accggcgatggcttagacacgccccacagcatcacgccggcacctagccaatgtgggact
ccaccctccggtcccagtatgccttattcgcagtctcacgtccagtctcagcagcagcag
ccaccaggtgctgtaccgcctcgtatggtccgcctctctagctctgatagcatcgggcac
gatatcatagaaatcttgtcagatttgcccgagcagacgggcaaaggcagcggcgggagc
catgggcagcacccaatgggcaacggtggggaggacggaggtcccctcgggacccccatc
cgtgactcctccagctcaggccagggcagtgcggtctttgactccgcagacatcttcaac
agcaacgagaacccttttactgatgccgctgacctgattgctgaggcaactgctgccaca
cccaccagtgattcttcctccaccaacttcccagatgctgccgacttcaacccagacctg
ttgacctcaggccatggatactttgatgacagctctccaagtgcagatggagacatggac
ctggtgaagggttttggggaaagtagccagcagaatagcccatcaggaacacctcagaat
cccactccagatgggcagggcaccccagagaaggacccttttgatattgggatcgttttt
ggaggcaacagtggtagtggtaaaccgctcctggggcaagctcccgatttgggagacgca
catggcggagggtcccagagccccctcattatgggcctcgcagcggcatgtgctgaattt
aaaagtgcagaacccaaaatgaaacagcaacagggactcatgagaccaaaggatgaaaac
gggggtagcggagggagcagctctgggatggggatggggagcagtttaacggaagttaaa
caggtcaaacgtagcaggaccccatcaagtgagggaaagtctaaagaaaagccccccaaa
cgcaaaaagatggacccagatgggaagtccccctcacacagctcagggggacggccgtac
acgcctcctagtggtggttcaggctcaggaggaagtataagtggaggaggctccaagtct
cctggaagttctgggcgctcgcaaactcctcctggtggtgccacacctccaattccgaaa
atcacgattcagatcgcaaaagggaccataactggggggaaaacgtcatcccatagtggc
tacacctccagcagctcagccacaagcagcacaggtggagctgggggaaccagtagcagc
aaaagccatcattctcactcctcctcgtctggaaagatcaagtccaaagaaggatccaca
acgcaaggcagcagctccaagccagggaccacaggaataggaataggaagtggaagtggg
tcatcccagtctaaaggctcctctcaaggaatgggtgtcggcaaaccaggatcctcccca
atcaccaaacatgggctgtccgggcctggaggcagtggtagtggaatgggaagtggcagt
aaaatgaagcctcaggggggtaagcctcctggatctcttatgaatcccaacataaagccc
aacatctccccttctcactcccgctccggtagctctggtgacaaattgtcctccccgatg
aaaatgcagcagtcccaggttccagggacacctccttcttccaaggccaaatcgccaatg
ggctcaggaggtgctagctctgggggttcaaagtcttctggcggcggcatgagctcccag
aagccaatgggtgggagctcttctggttccacatcctcctcgtcatcctcaagctcgtcc
tctggctccatggccttctcagggggctctcaatctcagtatgggggaggtgggagtgga
gggggaggaggaggaggagggacaggcggaggaagtggaagtgtaggcagtggtggaggt
ggaggaagcagttgtggtggggctggtcagaacaatgcaaacaaccccaacgccaaaggg
aagtctcccagtcgtaacaagaaaccctcccttacggcagtcatagacaaactgaagagt
gtcggcggaggaggagtgggggaggatggttgtgaggtagggccaccagcagggggaact
ggttcgggatctgctcctggaggaggcggtggcggcggcggtggtggtggtggtggtggt
ggtcatggtcatggaaatgttcccagcagtggaccttcaaacttgggcccttccaagcat
ggctcgtcctcccaaagtggggagtacaagcgggagaagtccgataaagaggcaaaagca
aaagtgtcggtttccggcgggaacagtggggataaaaagccgacggaccccaaagcagga
ggtggaagtgcaaccggcctggccaaaatcatcatcagcaaacccgatggtggctcgcca
agcatcaaggccaaagtgacccttcagaaagcaggggacgggtccggcgactccacgcgt
ccgcagattccgagtctcaaggcgtcgcccctcttcagcggctcgacccccaagcacgac
cgctcgtccccgagccacagccgctcgccggggtacacgccgctcaaccaggacagcgag
agcgagtcgggcggcagctcggtggccgagaggtcccaccagaacagccccagctcggac
gacgacgaccagaccgtgcgaccgcttcccccccaggactacatgggcgccatccccctc
agctcgggggagaagcacaagaagcacaagaaggagaagaagaagcagaaggagagggaa
cgggagagggaccgagaccgggagagggagaaggagaagaagaagtcctctctgtccatg
gggccgtcctctcatcccataaaagcagacagttggtcgcggtcacccatcgccgcttca
gagtcgtcgttgtccatgctgggttcagagcgtccgtcccggcccagtccgatgtacatg
aggaatgaagacgacgacctcatggactcggccctcactggcaacctttaa
DBGET
integrated database retrieval system
