Pseudoliparis swirei (Mariana hadal snailfish): 130203537
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Entry
130203537 CDS
T09868
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130203537 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130203537 (vti1a)
Membrane trafficking [BR:
pswi04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
130203537 (vti1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec8_N
Mer2
Sec20
LMBR1
CAP59_mtransfer
Laminin_II
MinC_N
DUF1664
DUF5344
BPS1
Motif
Other DBs
NCBI-GeneID:
130203537
NCBI-ProteinID:
XP_056285755
LinkDB
All DBs
Position
13:complement(4791399..4910998)
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AA seq
224 aa
AA seq
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MSSDFEAYELDFGTITAELTNKIGRIPKLSGEDKTQLVLNVDKQLEEVRELLEQMDLEVR
EIPIQSRAMFNSRLKSYKQEIEKLEKDFKRSRIAYSDEVRNELLGDDASTSENQLIKLRE
ERAHLLDNTEKLERSSRRLEAGYQIAVETEQVGQEILSNLNSDREKIQRARERLRETDAN
LGKSSRILTGMLRRIIQNRALVFILGAIILLTIILAIYFNLRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagactttgaagcctacgagctggactttggaaccatcacagcagaattaact
aacaaaattggcagaatcccaaaactaagtggagaggataagacgcagctggttctaaat
gtcgacaaacagcttgaagaagtcagagagttgctggagcagatggacctggaggtgcgg
gagatccccatccagagccgagccatgttcaacagcagactgaagagctacaagcaggag
atagagaagcttgagaaagactttaaaaggtcacgtatcgcctacagtgacgaggtgcgc
aacgagctcctgggggatgacgccagcacctcggagaaccagttgataaagttacgtgaa
gagagagcgcatctgttggacaacacagagaagctggaaaggtcatcccggagactggag
gccggctaccagatagcagtagaaaccgaacaagtgggtcaggagattctttccaacctg
aacagtgaccgtgagaagatccaaagagccagagaaaggctgagggaaacggacgccaac
ctgggcaagagttctcgcatccttactggcatgctgagaaggatcatccagaaccgggcc
ctggtcttcatcctcggagccatcatccttctcaccatcatcctggccatctatttcaat
ctgcgaggccactga
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