Pseudoliparis swirei (Mariana hadal snailfish): 130203584
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Entry
130203584 CDS
T09868
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pswi04054
]
130203584 (nlrc3)
Pattern recognition receptors [BR:
pswi04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
130203584 (nlrc3)
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
AAA_16
AAA_33
LRR_4
Motif
Other DBs
NCBI-GeneID:
130203584
NCBI-ProteinID:
XP_056285864
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Position
13:complement(745010..761369)
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AA seq
1132 aa
AA seq
DB search
MERKTHYDSILDRSRRITWQDDCYVDLQSASGSPSSHTHDLDWIQKHQEHLQRFMTTSFL
EGILAHLRQVDVLSSAEETKIKEAARLQDQVHMLTTIVTGKDAHSWDALRGFIESSECQA
ARLIISHDSWVKEHKEVLLRRYEQYRDRDSVSCPKLSISSRTLLLVDGLSDIQQKEHDLM
QVGATRGRKRNHLRPLGLTKLLEPLTRVSLPPRVSLTVGVAGIGKTTWVRHFIRQWSRGA
VCTDVSFVLPFTFCELNSLEKVSAEKLVTMAFPHLTDPGVVLSSSCRTLLILDGLDEFRH
TLNFSDAAPCSDPKKEVSIDDLVTNVLRGNLLPDVAVWLTCRPGVASLIPGGLVDRVTEI
PGFSPQDIQLFLNHHFSERDFAGQIWAHLESHKILMVMCYIPCICWIVADTLTFIMQSET
QESLPRTCTELYAHFCSMKAEVGEPRGREPVKTEPLHGSNRKLLGNLGRLAFYGLLKHKY
TFSEQDLRASGIDLLLSQSSLGSGILVREELAMNTTYRFTHLSLQEFLAATFYHISSKRA
IFDLFSESTMSWPKLGFQNHFRSAFQRSQQANDGHLDVFVRFLAGLLCPAALKPLAGLLA
LGKDDGSQKAWAAGFLQGLLVGGGAVVSLREVNLAYCLQELQHTELLRSVEQDLQLRSLA
GKLTRAHCVVLGFLLHVSPQCSEQTDLSGSLNFTTVKCLLPQLLYCSCLRLENNHFKDDV
MELLGSLLSAKDCHIQKMSLAENAIGNKGAKALSRALLVNRTLTSLNLRNNNIGSKGAKF
LAEALKMNQVLVSINFQNNNIEADGAQALAEVLHCNRKLVSLNIRNNTIGAGGAKRIAEA
LKTNRTLTKLILCSNRLGDRGAVALAEALAVNHTLLSLQLQSNSISNRGMSALTRALRLN
RGLISLNLRENSIGVEGAKNMARALQENHSLQDLDLTANLLHDEGVQAIAGAMELNHGLT
ALHLQWNFIQCSATKALAQALLSNNTMQLLDLQENAIGNEGVISLAKALQTNTSLHTLCL
QGVSLSSSGALAIAEALLTNQSLQTLDLRGNAVGMEGAKALANALKSNRSLKSLNLQENS
LGMDGAIFIATALKGNHQLTYINLQENGLGESGAKVISDAIRAGAPGCEVDI
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaagacccattatgattccatcctggaccgaagccgacgcatcacgtggcag
gacgactgctacgtggacctgcagtctgcgtccggctcgccctcctcacacacccacgac
cttgactggatccaaaagcaccaggaacatctgcagcgcttcatgacgacctccttcctg
gaggggatactcgcccacctgaggcaggtggatgtgctgagttcagccgaggagaccaag
atcaaggaagcggcccggctgcaggaccaggtccacatgctcaccactattgtcactggc
aaggacgctcacagttgggatgctctgcggggcttcatcgagagctcagagtgccaggcg
gcccggctcatcatcagccacgattcctgggtgaaggagcacaaagaggtgctgttacgg
cgctacgagcagtaccgagacagagattcagtcagctgccccaaactgagcatctcctcc
agaaccttacttctggtggatggactatccgacatccagcagaaggaacacgacttgatg
caggtgggggcgactcgaggcaggaagagaaatcacctcagaccgctggggctgaccaaa
ctcttggagcccctgacacgggtcagtttacccccccgggtctccctcacggtcggggtg
gctggtatcgggaagacgacctgggtccgacacttcatcagacagtggagccgaggggcc
gtctgcaccgacgtgagcttcgtcctgcctttcactttttgcgagctgaactcgttggag
aaagtctccgctgagaagctggtgacgatggctttccctcatctaacagacccgggcgtg
gtcctgagcagctcctgccgcacactgctgatacttgatggtctggacgagttccgccac
actttgaatttctccgatgcagctccttgcagcgatccaaagaaagaagtgtccatcgat
gacctcgttaccaacgtcctccgcggtaatctgctccctgacgtggcagtgtggctgacc
tgcaggccgggagtggcctcgctcatccccggaggattggttgacagggtgactgagatc
ccaggattcagcccgcaagacatccagctcttcctcaaccaccacttctctgaaagggac
tttgccggtcagatctgggcgcacttggagtcccataagatcctcatggtgatgtgctac
attccgtgcatttgctggatcgtagctgacactctgacgttcatcatgcagagcgaaacg
caggagagccttccgagaacttgcaccgagctttacgctcacttctgttccatgaaggca
gaagtgggtgaacccagaggccgggagccggtgaagacggagccgctccatgggagcaat
cgtaaactgctggggaaccttgggcgactggcgttttacgggctcctcaaacacaagtac
accttcagcgagcaggacctccgggcctctggcatcgacctcctgctgagtcagagcagt
cttggttctgggattctcgtccgggaggagttggccatgaacacaacgtaccgcttcact
catttgtctctgcaggagtttctcgctgctactttttaccacatctcctccaagcgggcc
atctttgacttattctcagaaagcaccatgtcttggcccaagcttggtttccagaaccac
ttcagaagtgcctttcagcgctcgcaacaagccaacgacggtcacttggatgtgtttgtg
cgctttctcgcgggcctgctgtgcccagcggcgctgaaacctctcgctgggcttctggcc
ctcggaaaagatgacggaagtcagaaggcgtgggcggccggcttcttgcaaggcctgctg
gtcggcgggggtgcggtggtgtccctgcgtgaggtcaacctggcttattgtttacaggag
ctgcaacacacagagctgctgcggagcgttgagcaagacttacagctacgtagcctagcg
gggaagctaacacgggctcactgtgtcgtgctgggcttcctcctgcatgtgtccccacag
tgcagcgagcagaccgacctcagcggctctctgaacttcacgacggtgaagtgtttgctc
ccacagctgctgtactgcagctgcctcaggctggagaataatcacttcaaagatgatgtc
atggagctgctgggaagcctcctgagcgccaaagactgccacatccagaagatgagtttg
gcggagaacgccatcggtaacaaaggtgccaaagccctcagtcgagccctcttggtgaac
cggaccctaacatctctcaacctccggaacaacaacatcggctctaaaggtgcaaagttc
ctggcagaggcactgaaaatgaaccaagtcctggtatcaatcaacttccagaacaataac
atcgaggcggacggggctcaggccctggcagaggtactgcactgcaaccgcaaactggtg
tctctgaacatacggaacaatacgatcggagcgggaggagccaaaaggattgcagaggcc
ctgaagacgaaccggactctcacaaagctgattctttgcagcaaccggctcggggacaga
ggggcggtcgctctggcggaggcgttggcagtcaaccacactctgctctcgctccaactt
cagagtaactcaatcagcaacagggggatgtcggccctcaccagagcactcaggctgaac
cgcggcctcatctccttaaacttgagagagaactccatcggggtggagggggccaagaac
atggcccgagccctccaggagaaccactctctgcaggacctcgatctcacagccaacctg
ctgcacgacgaaggggttcaagctatagccggcgcaatggagttgaatcacggcctcacc
gctctgcatctgcagtggaatttcatccaatgttctgccaccaaagcgctggcccaggct
ctgctctccaacaacaccatgcagctcttggatctacaggagaacgctatcgggaatgaa
ggcgtcatttctctagccaaagcccttcaaaccaacacatccctgcacacattatgtctc
cagggagtgtccctgagctccagcggcgcgctggcgatagcagaggctctgctgacgaac
cagagcctgcaaacgttggatctccgtgggaacgctgtggggatggagggcgcgaaggct
ctggccaacgcactgaagagcaaccggagcctcaagtcactgaatctccaggagaactct
ctggggatggacggagccatcttcatcgcaaccgccttgaagggaaaccaccaattaaca
tacatcaatctgcaggaaaacggcctcggagaatcgggggcaaaggtcatatctgacgcg
atccgagccggcgctccaggctgtgaggtggacatctga
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