Pseudoliparis swirei (Mariana hadal snailfish): 130203594
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Entry
130203594 CDS
T09868
Symbol
trim65
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM65
KO
K12031
tripartite motif-containing protein 65
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130203594 (trim65)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130203594 (trim65)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SPRY
TRIM_CC
PRY
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
zf-RING_5
zf-B_box
Prok-RING_4
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
130203594
NCBI-ProteinID:
XP_056285885
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All DBs
Position
13:11779065..11786226
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AA seq
518 aa
AA seq
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MSALSSEMESQNSTLNCIICFDRFYFPVTIPCGHTFCKKCITDLWDTKSKLNLGPQCPLC
NEEFATRPVLNRNVLMSMLTEAANSAGPSCPESPMRGGEGAMLLCDRHKKPLVYYCRHDK
MSVCCECGISECVHHEKVMLEAERGDQELLLERKSKEVEKLTEETLKSIVDLTENLNQAK
VALQQTSTWVSVKFSSLIKILAEKQEATELFVEEQREAAVVEAEARLAALEERCQKLRAS
QGEIAAVHGLSDTELIKRSMLLEVPRFTDIPTDVTPNLQDRLNGVTDVLARVSKLVFEDL
EKAVSAAVGPDEDGSPQDKRPVLAVVPSPAAPCHPGGKEGLNAFRCFLTFDPRTANGHLS
LSRENQRAEHLTSGPRPVPAHEARFDHTWQVLCCQGFTGGQHYWELEVSKPWAYLGVTYE
TIPRKEKGKRCMVGMNELSWSLQLDEHQLSAWHNGRREILAGASRHARIGMLLDYEAGTL
TYYGDGQTRLHAFHCAFSRELFPACWIGEGVSITLCAT
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctctgtcttcagagatggagtcccagaattcgaccctgaactgcatcatatgc
ttcgaccgcttctacttcccggtgacgatcccctgtggccacaccttctgtaaaaagtgc
atcacggacctctgggacaccaagagcaagctcaacctcggaccccagtgcccgctctgc
aatgaggagttcgccacgcggcccgtcctcaatcgcaacgtgttaatgtcgatgctgacg
gaggcggcgaacagcgcgggcccctcctgtccagagtcgcccatgaggggcggcgaaggg
gccatgctgctgtgcgaccgccataaaaaacctctggtttactactgcaggcacgacaag
atgtccgtgtgctgcgagtgcggcatctccgaatgcgttcaccacgagaaggtcatgctg
gaggcagagaggggagaccaggagctgctgctggaaaggaagagtaaggaggtggagaaa
ctcaccgaggagacgctgaaaagtatcgtggacctgactgagaatctcaaccaagcgaag
gtggctcttcagcagacttctacctgggtcagtgtcaagttctcctccctgattaaaata
ctggctgagaagcaggaggcgacggagctcttcgtcgaggagcagagagaagccgccgtc
gtcgaggcggaggccaggctggctgcgctcgaggagcgctgccagaaactccgagcgagc
cagggagagatagcagccgtgcatggcctctccgatacagagctcatcaagcgatcgatg
ctcctcgaagttccacgtttcacagatattcccacggacgtcacgcccaaccttcaggac
cggctgaacggggtcaccgacgtcctggccagagtctccaagctggtgtttgaggacctg
gagaaagctgtgagcgccgccgtgggtccggacgaggacggttctcctcaggataagagg
ccggtcctggctgtggttcccagtccggctgctccgtgccacccgggtgggaaggagggc
ctcaatgccttccggtgctttctgacctttgacccccgcacggccaacgggcacctgtct
ctctcccgggagaaccagagggcggagcacctgacctccgggccgcgccccgtcccggcc
cacgaggcgcgcttcgatcacacgtggcaggtgctctgctgccagggcttcactggcgga
cagcactactgggagctggaggtgtccaagccctgggcctacctcggggtgacctacgag
accatccccaggaaggagaagggcaagaggtgcatggtgggtatgaacgagctgtcctgg
agcctgcagctggacgagcatcagctgagcgcctggcacaacggccggcgggagattctc
gccggcgcctcgcggcacgcccgcatcggcatgctgctggactacgaggcgggcacgctc
acctactacggggacgggcagacccggctccacgccttccactgtgccttcagccgggag
ctgttccccgcctgctggataggcgagggggtcagcatcaccctctgcgccacatga
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