Pseudoliparis swirei (Mariana hadal snailfish): 130203653
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Entry
130203653 CDS
T09868
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04510
Focal adhesion
pswi04520
Adherens junction
pswi04810
Regulation of actin cytoskeleton
pswi04820
Cytoskeleton in muscle cells
pswi05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130203653
04520 Adherens junction
130203653
09142 Cell motility
04820 Cytoskeleton in muscle cells
130203653
04810 Regulation of actin cytoskeleton
130203653
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130203653
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130203653
04147 Exosome [BR:
pswi04147
]
130203653
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130203653
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130203653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
130203653
NCBI-ProteinID:
XP_056285978
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All DBs
Position
13:4973387..4998743
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AA seq
1065 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKD
TVQTTEDQIMKRDMPPAFIKVENACTKLVQAASMLKADPYCVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPILISGIKIFATTKTSGSHGVEEALKNRNFTFEKMSAE
INEIIRVLQLTSWDEDAWTNKDTEAMKRALGLIDTKMAQAKNWLRDPNAQQGDAGEQAIR
QILDEAGKVGELCAGKERRDVLGTAKTLGQMTDQVSEIRARGHGASPTAMQKAQQVSQGL
DVLTGKVVTAARKLEAMTNSKQAIAKRIDAAQNWLADPKGGPEGEENVKALLIEAKRIAD
MCEDPKERDDILRSIGEIAAMTAKLSDLRRQGKGDTPETRALAKQIATSLQNLQSKTNKA
VANSRPAKAAVHLEGKIEQAQRWIENPTMDDSGVGQAAIRGLAAEGRRLAIALPGPYRQE
LLGKCERVEQFMAQLADLAARGEGDSPQARAVARQLQEALKDLKGKMQDAMTQEVSDIFS
DTTTPIKLLAVAATAPLNSPNRDEVFDDRAANFENHANKLGTTAEKAAAVGTANRNTVEG
IQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLEASEGAIKKDLEKCRLAMVNHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
AMVKAASDDLSQTISPMVMDAKAVAGNIHDPSLQKGFLDSGYTILGAVAKVREAFQPQEP
EFPPPPPELDQLNLNDDAAPPKPPLPEGEVPPPRPPPPEEKDEEFPVQTGDMINEPMMVA
ARQLHDVARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGGGNKRALIQCAKDIAKASDDV
TLLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQATE
MLVHNAQNLMQSVKETVREAEAASIKIRTDAGFALHWIRKTPWYQ
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgccggtctttcacacgaagacgatagaaagtatcctggagcctgtggctcaacagata
tcccatctggtgataatgcacgaagaaggcgaagttgatgggaaagccattccggacctg
acggcgccggtggctgccgtgcaggcggctgttagcaaccttgttcgtgtggggaaagac
accgtacaaaccacagaggaccagatcatgaaaagggacatgccaccagcttttatcaaa
gtggagaacgcgtgcactaaactggtgcaagcggcctccatgctgaaagctgatccatac
tgtgttcctgctcgggattacctcatcgatggctctcggggcatcctctctgggacctct
gacctgctcctgacctttgacgaagctgaggtccgcaaaataatccgtgtgtgcaaaggc
atcctggagtacctgacggtggcagaggtggtggagtctatggaggacttgatcacgtac
acaaagaacctgggaccaggcatgacgaagatggcgaagatgatagacgagcgacagcag
gagctgacgcaccaggagcaccgtgtgatgttggtgaactccatgaacacagtcaaagag
ctgctgcccatcctcatctcaggtataaaaatctttgcgacaaccaagacctctggcagc
cacggtgtggaggaggccctgaagaaccgtaacttcacttttgagaagatgagcgccgag
ataaacgagatcatccgagtgctgcagctcacgtcctgggacgaggacgcctggaccaac
aaggacacagaggccatgaagagggctctggggcttatcgacacaaagatggctcaggct
aagaactggctgagagatccaaacgctcaacaaggggatgcaggtgagcaggccatccgc
cagatcctcgatgaagctgggaaagtgggtgaactgtgtgctgggaaggagcgcagagat
gtcctgggcacagccaagaccctgggccagatgactgaccaggtgtctgagatcagggcc
agaggtcatggggcatccccgaccgccatgcagaaggcgcagcaggtttcccaggggctt
gacgtgctaactggcaaggttgtaactgctgctcgcaagctggaggccatgactaactcc
aagcaggctattgccaaaaggatcgatgctgcacagaactggctggcagaccctaaaggc
gggccagagggagaagagaacgtcaaggccctgcttattgaggccaaaaggatagcagac
atgtgcgaggacccgaaagaaagggatgacatcttgcgctctattggagagatcgctgcc
atgacggccaaattgtctgatctcaggagacagggtaaaggtgacactcctgaaaccaga
gcgttggctaaacagatcgcaacatctctgcagaacctgcagtccaagaccaacaaagct
gtggccaacagcaggcctgcgaaggcagctgttcacttggaaggaaagattgagcaagcg
cagcgctggatcgagaaccccaccatggatgacagcggagtgggccaggcagccatccgt
gggctggcggccgagggccgcaggctggccatcgctctgccggggccgtacaggcaggag
ctgctgggtaagtgtgagcgggtggagcagttcatggcccagctagccgacctggcggcc
cgcggtgaaggcgactcccctcaggcgcgagctgttgctcggcagctccaggaggctttg
aaagatctaaaagggaagatgcaagatgcgatgactcaagaggtgtcagacatcttcagt
gacaccaccacccccatcaagttactggcagtggctgccactgcccccctgaactcgccc
aacagagatgaggtctttgacgatagggctgccaactttgagaaccacgccaataagctt
ggcaccacagcggagaaggctgctgctgtcggcactgccaacagaaacacggtggaggga
atccaggctgctgtcaagtcaacaagagacttaacaccacaagtggtgtctgctgctcgt
attctgctgagaaaccccggcaaccaagctgcatatgaacattttgaaaccatgaagaat
cagtggattgacaatgtggagaaaatgacaggtttggtggacgaggccatcgataccaaa
tccttgctggaggcctcagaaggcgccatcaagaaggacctggaaaagtgccgtttggcc
atggtcaaccaccagcctcagatgctggtcgccggcgccaccagcatcgcccgcagagcc
aaccgtatcctcctggtggcgaagcgagaggtggagaactccgaggatcctaaattcagg
gcgatggtgaaggctgcgtctgatgatctgagccagacgatttctcccatggtgatggat
gctaaagcggtggctggaaatatccacgatccaagtcttcagaaaggcttcttggactcg
ggttatacgattcttggtgctgtggcaaaggtcagggaggcattccagccccaggagcca
gaattcccaccacctcctcctgaactggatcagctcaatcttaacgatgatgcagcacca
cccaaaccacctcttcctgagggcgaggttcctccccccaggcctcctcccccagaggag
aaagacgaggagttccctgtgcagaccggcgatatgattaacgagcccatgatggtagct
gccaggcagctccacgatgtagcccgcaaatggtccagtaaaggaaacgacatcatcggt
gctgccaaacgaatggccttgctcatggcggagatgtctcgtctggtgcgtggaggaggt
ggaaacaagcgcgccctcatccaatgcgccaaggacatcgctaaggcttctgatgacgtc
acactgctggccaaggaggtggccaagcagtgcaccgacaagcgcatccggaccaacctg
ctccaggtgtgcgagcgtattcctaccatcagcactcagctcaaaatcctgtccacagtc
aaggccaccatgttgggtcgtaccaacatcagtgaagaggagtcagaacaggctaccgag
atgttggtccacaacgctcaaaacctgatgcagtctgtgaaggagacggtccgggaggct
gaggcagcttccattaagatccgcacagatgctggtttcgccctgcactggatcagaaag
accccctggtaccagtaa
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