Pseudoliparis swirei (Mariana hadal snailfish): 130203731
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Entry
130203731 CDS
T09868
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04060
Cytokine-cytokine receptor interaction
pswi04217
Necroptosis
pswi04620
Toll-like receptor signaling pathway
pswi04621
NOD-like receptor signaling pathway
pswi04622
RIG-I-like receptor signaling pathway
pswi04623
Cytosolic DNA-sensing pathway
pswi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130203731
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
130203731
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130203731
04621 NOD-like receptor signaling pathway
130203731
04622 RIG-I-like receptor signaling pathway
130203731
04623 Cytosolic DNA-sensing pathway
130203731
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130203731
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pswi04052
]
130203731
Cytokines and neuropeptides [BR:
pswi04052
]
Cytokines
Interferons
130203731
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Gene cluster
GFIT
Motif
Pfam:
Interferon
NRDE-2
Glyco_hydro_20
Motif
Other DBs
NCBI-GeneID:
130203731
NCBI-ProteinID:
XP_056286094
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Position
13:complement(9743433..9744405)
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AA seq
179 aa
AA seq
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MLSRMLLVFLSLSLFSSASSLSCRWMDHKFRQHSHNSLDLIERMAHNSTKTTEDVEVNFP
HHLYSQASKASAEDKLRFTIQILEEMAALFEKDHSNASWEEITVDHFLIVVTQQADGLHS
CVKSHGHKKQNKKLRMYFKRLSHIMEQMGHSAESWELIRKEMKTHLMRADQLASSLLTT
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcaggatgttattggtgttcttgtctctcagtctcttcagttcagcctcctcg
ctgagctgcagatggatggatcataaattcagacagcacagtcataactctttggatctc
atagaaaggatggctcacaactccactaaaaccactgaggatgtagaagtgaacttccct
catcatctgtacagccaggcgtccaaagcctcagctgaggacaaactcagattcacgatt
cagattctggaggagatggctgccctgtttgagaaggatcacagcaatgcatcatgggag
gagatcacggtggaccactttctcatagttgtgacccagcaggccgacggccttcactcc
tgtgtgaagagccacggccacaagaagcagaacaagaagctgcgcatgtatttcaagaga
ctctcacacatcatggagcaaatgggccacagcgctgaatcctgggagctgatcaggaag
gaaatgaagacccatctgatgagagcagaccagctggcttcatctctcctcaccacctga
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