Pseudoliparis swirei (Mariana hadal snailfish): 130203756
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Entry
130203756 CDS
T09868
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03020
RNA polymerase
pswi04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130203756 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
130203756 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130203756 (polr3a)
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130203756 (polr3a)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
130203756 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
130203756
NCBI-ProteinID:
XP_056286128
LinkDB
All DBs
Position
13:5618333..5637685
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHTPLPYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSSIMLTKD
EKLQFMDFLKKPNLPYLQKRGLKKKISDKCRKRTICLSCSAFNGPVKKCGLLKIIHEKYK
TTKKVVDAFVSEFLQSFDTAIEHNKVVEPLLTRAQENLNPLVVLEMFKRISQEDIPLLLM
NPESGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRVTG
AKTQMIMEDWDFLQLQCALYFNSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSSRTVISPDPNLRIDEVAVPVHVAKILTYPEKVTKANLELLRKLVRSGPEVHPGANF
IQNRHTQLKRFLKYGNREKIAQELRFGDVVERHLMDGDIVLFNRQPSLHKLSIMAHIAKV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANFVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFERAKSCQLIASILVDQDEKVKISLPRPAIMKPMALWTGKQI
FSLILKPNKECPVKANLRTKGKQYCGKGEDLCFNDSFVVIHNSELMCGSLDKGTLGSGSK
NNIFYILLRDWGQQEAANAMSRLARLTPVYLTNRGFSIGIGDVTPGQGLLKAKQDLLDEG
YAKCDDYIEALRTGKLPQQPGCTAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAIYACPDEPALSQNELVLTADSITKRNDFLC
CKDGFLEEMKKFIKSISERIKKTRAKYGIHDNGTSEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHMDVEDNADFGRLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENNKSSMYYVLQSLKGDLPKVV
VQGIPEVSRAVIHIDEQSTKTMYKLLVEGDNLRAVMATHGVNGSRTTSNNTYEVEKTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKTDKDPSPVRRPLLFD
SADFHIPLIT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagagagacggatgtggccaagaaaataagccacatctgcttt
gggatgaaatctgctgaacagatgcgtcagcaggcccacatccaggtggtcagcaagaat
ttgtacagccaagacaccaaacacaccccattgccgtatggagtgttggaccaccgcatg
ggcaccagtgagaaagacagaccgtgtttgacatgtgggaagaatctggcagattgtttg
ggacattatggctacttggatctggagcttccatgttttcatgttggctattttaaagcc
atcataggaatcttacagatgatttgtaagacatgctcaagcataatgctgacgaaagac
gagaaactgcagttcatggatttcttgaaaaagcccaacctgccctatctccagaaacga
gggctgaagaagaagatctctgataagtgtcgcaaaaggacaatctgtctgagttgttca
gcattcaatggaccagtgaaaaagtgtggtctgcttaagatcatccatgagaagtataaa
actaccaagaaggtggtggatgcttttgtgtccgagttcctgcagtcctttgatactgcg
attgagcacaacaaagtggtggaaccgttgctgaccagagcacaggaaaacctgaaccct
ctggtggtgctggagatgtttaagaggatttcccaagaagacattcccctgctgctgatg
aaccctgagtcagggaaacccgcagacctcattctcacccgcctcctggtgcctccgctc
tgcatacgaccctctgtggtcagcgacctgaagtcgggcaccaacgaggatgacctcacc
atgaagctcacagaaataatcttcctcaacgatgtcatcaaaaagcatcgtgtgacgggg
gcaaagacccagatgatcatggaggactgggacttcctccagctgcagtgtgctctttac
ttcaacagcgagctttctggcatccccctcaacatggcacctaagaaatggaccagaggc
tttgtgcagagacttaaagggaaacaaggtcgattcagaggaaacctctcaggaaaaaga
gtggacttctctagcagaactgtaatttcccccgacccaaacctgaggattgatgaggtg
gccgtccccgtgcatgtggccaaaatcctgacgtacccagaaaaggtgaccaaagccaat
ttggagttactgaggaaactggtccgcagcggtcctgaggttcatcccggagccaacttt
atccagaatcgtcacacacagttgaaaaggtttttgaaatacggaaaccgtgagaagatc
gctcaagagctgaggtttggggacgtggtggaaaggcatctgatggacggagacatcgtc
ctcttcaatcgacaaccctccctgcacaaactcagcatcatggcccacattgccaaagtc
aaacctcacaggacgtttcggttcaacgagtgtgtgtgcaccccatacaatgccgacttt
gacggtgatgaaatgaaccttcatctgcctcagactgaagaagccaaagccgaggccctc
gtcctgatggggacaaaagccaattttgtcactccaagaaatggcgaaccgctgattgct
gccattcaggactttctgacaggggcttacctcttgacactgaaggacaccttctttgag
agagcaaaatcctgtcagttaatcgcttcaatccttgtggaccaagatgaaaaagtcaag
atctctctcccccgcccggctatcatgaagcccatggctctgtggacgggcaaacagatc
ttcagcctcattctgaagccaaacaaggagtgtccagtgaaggcgaacctgcggaccaaa
ggcaaacagtactgtggcaagggagaggatctctgcttcaacgactcatttgtggtgatc
cacaacagtgagctgatgtgtggttctctggacaaaggcaccttggggtcaggctctaag
aacaacatcttctacatcctgctgagagactggggacagcaggaggctgccaacgccatg
tctcgcctggcgagactcactccggtgtatctaaccaaccgaggcttttctattggcatt
ggcgacgtgaccccgggccagggtctgctgaaggccaaacaggacctgcttgatgaaggt
tacgctaagtgtgacgattacatcgaagctctacgcaccggcaagttgccgcagcagcca
ggatgcaccgcagaggagactctggaggctctcatcttgagagagctgtccgtcatcaga
gatcgagcaggtagcgcctgcctcagggagctggacaagagcaacagccccctcatcatg
gctctttgcggctccaaagggtctttcattaatatctcccagatgattgcctgtgtgggc
cagcaggccataagtggctctcgagtacctgatggatttgagaatcgctccctgcctcac
tttgaaaagcattcaaaactgcctgctgctaaaggctttgtggccgacagcttctactct
ggcctgacgcccactgagttcttttttcataccatggctggccgtgaaggtctggtggac
actgctgtaaaaactgcagagactggatacatgcagaggcgtctggtgaagtccctggag
gatctgtgctcacagtacgacctgacggtacgcagctccaccggcgacatcatccagttc
atttatggcggcgatggtctggatccagctgccatggagggaaaggacgagccgctggag
tttaagagagtcctcgacaacatccgggcgatctacgcgtgtccagacgagcctgcgctc
agtcagaacgagctggtcctcaccgccgattccatcacgaagagaaatgacttcttgtgc
tgcaaagacggcttcttggaggagatgaagaaatttatcaagagcatctcagaaaggatc
aagaagaccagagccaagtacggcatccacgacaacggcaccagcgagcccaaggttctc
tatcagctggaccgcatcacgcccactcaactggagaagttccttgaaacctgcagagac
aagtacatgagagctcagatggagcccggctcagcagtcggggccctgtgtgcccagagc
atcggagagcccgggactcagatgaccctgaaaaccttccactttgctggtgtggcgtcc
atgaacatcactctgggggtgcctcgcatcaaagagatcatcaatgcctccaagaacatc
agcactcctataatcacggctcatatggatgtagaagacaacgccgacttcggccggctg
gtgaagggaaggatcgagaaaactcttctcggagagatttccgagtacatcgaggaggtt
tttctaccagatgattgcttcatcctggtgaaattgtctcttgagagaataaggctgctg
cggctggaggtaaatgcggaaacggtgcgttactccatctgcatgtctaaactgcgggtg
aagccaggagacatcgctgtgcacggcgaggcggtggtgtgtgtgtctccgcgagagaac
aacaaaagttccatgtactacgtgctgcagtccttgaagggggatctcccgaaggtggtg
gtccagggcataccggaggtttcccgagcggtcattcacattgacgaacagagcaccaag
accatgtacaagctcctggtggagggcgacaacttgagggccgtcatggcaactcacgga
gtgaatggaagcaggaccacttcaaacaacacatacgaggttgagaagactttgggtatt
gaggcggcgagatccaccatcatcaatgagattcagtacaccatggtgaaccacggaatg
agcatcgaccggcgtcacgtcatgcttctagcagacctcatgtcctacaagggggagatc
cttggaatcaccaggttcggtttagccaaaatgaaggagagtgtccttatgctggcgtcc
ttcgagaaaacagccgatcatctctttgacgctgcctactttggacaaaaggactccgtc
tgtggtgtgtccgagtgcatcattatggggattccaatgaacatcggaaccggactgttt
aaactactccacaagactgacaaggatccctctccagtcagaagacctctcctctttgac
agcgcagacttccacatacctctgattacatag
DBGET
integrated database retrieval system
