Pseudoliparis swirei (Mariana hadal snailfish): 130203828
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Entry
130203828 CDS
T09868
Symbol
nrxn1a
Name
(RefSeq) neurexin 1a isoform X1
KO
K07377
neurexin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130203828 (nrxn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130203828 (nrxn1a)
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
130203828 (nrxn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Prokineticin
Motif
Other DBs
NCBI-GeneID:
130203828
NCBI-ProteinID:
XP_056286227
LinkDB
All DBs
Position
13:7075271..7129596
Genome browser
AA seq
1476 aa
AA seq
DB search
MTVMAVCVWVAAPLLFLGLCLCSVGSHAQGEVLEYGGVSSQWGRFPVWNACCESVLSFSL
RTHSQEGLLLYLDDEGFCDFLELLLLHGHLRLRFSIFCAEPAELQSGVAVGDGHWHAVRV
KRDWRNTSLEVDGRLEGWAEVKSKRRDMTVFSHTYMGGVTPELHSSPLRLTSPSVREQPA
FRGWITAVSVNGSLMTLESSEGVTVTAGCGPDHQCQNGGVCSVVNDQAVCDCSDTGFQGN
DCSDEHSYTPGLAHLMIGDQAREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSFKTLQR
NGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLR
QVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKN
NDVRLELSRLAKQGDPKMKVSGVVSFKCESVATLDPVTFDTPESFVALSKWSAKKAGSIS
FDFRTTEPNGLMLFSHGKPRQQQHKDPRTPPTIKVDFFAIEMLDGHLYLLLDMGSGTTKT
KAIDRKVNDGEWYHVDFQRDGRSGTISVNSVRTAYTAPGDSEILDLDETLYLGGLPEERA
GLIFPTEVWTALLNYGYVGCIRDLFVDGQSKDIRRLAEAQRAVGVKPSCSRDPPKQCLSN
PCQHNGVCREGWNRYVCDCSGTGYLGRSCERDATIMSYDGSKFMKVQLPLAMHTEAEDVS
LRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTASKGPETIFAGSG
LNDNEWHTVRVVRRGKGLKLTVDDLQPVEGQMAGDHTQLEFHNVETGIVTEKRFMPAVPS
NFIGHLQGLTLNGMPYIDLCKNGDIDYCELNAVIGYKSIVADPVTFRSRSSFITLPTLQA
YYSMHLFMQFKTTSPDGLVLFNRGDGNDFIVIELVKGYLHYISDLGNGAHLIKGNSNSPL
NDNHWHNVHISRDTNNLHTVKIDTKVTTQTTMGAKNLDLKGDLYIGGVSKEMYRELPKLV
HSREGFQGCLATVDLNGRLPDLLADALATIGQVERGCEGPSTTCQEDSCSNQGVCLQQWE
GFTCDCSMTSYAGPLCNDAGTTYIFGRDGGVVIYTWPPNERPSTRADRLALGFSTQQKHA
ILLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIEESSKFVNDGKYHIIRFTRSGGN
ATLQLDDLPVIERYPSGNIDNERLAIARQRIPYRLGRVVDDWLLDKGRQLTIFNSQTTVR
VGGGEQSAGMFQGQLSGIYYNGLRILNMAAEGHPHIRVDGSTRLVGDMPSSSITPQSSAA
AGGNRSDSAPSISDITTTTATSRKQGATQQSADDLLVASAECPSDDEDIDPCDPSSARPP
LPEVKVFPVPSEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRN
YISNSATQPNGSAKDKPLGITKISKNKKNKDKEYYV
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgatggcggtgtgtgtttgggtggcagcccccctgctcttcctggggctgtgc
ctgtgcagcgtggggagccacgcccaaggggaggtcctggagtacggcggcgtgtccagc
cagtgggggcggttcccagtgtggaacgcctgctgcgagagcgtgctgagcttcagcctg
cggactcacagccaagagggcctactgctctacctggatgacgagggcttctgcgacttc
ctggagctgctgcttctccacggccacctccgcctgcgcttctccatcttctgcgccgag
ccggcagagctacaatcaggcgtggcggttggtgacgggcactggcacgcggtgcgtgtc
aagcgggactggaggaacacctcgttggaggtcgacgggcgactggagggatgggcggag
gtgaagagcaagagaagagacatgacagtattcagccacacctacatgggcggggtgacg
ccagagctccactcctcgcccctgcgcctcacatccccttcggtgagggaacagcctgcc
ttccgtggctggatcacggcggtgagcgtcaacggctcgctgatgacgttggagagctca
gagggcgtcacagtaacagccggctgcgggccggatcaccaatgccagaacggaggggtg
tgcagcgtggtcaacgaccaggccgtctgcgactgctccgacaccggtttccaaggcaac
gactgcagtgacgagcacagctacactccaggtctggcacacctgatgattggcgaccaa
gctcgcgaggagtatgttgccaccttcaagggctctgagtacttctgctacgacttgtcg
cccaaccccatccagtcgagcagcgatgaaatcacgctctccttcaagacgctgcaacgc
aacggcctgatgcttcacaccggcaagtcggccgactacgtcaacctagcactgaagaac
ggggccgtgtcgcttgtcatcaacctcggctccggggccttcgaggccttggtggagccc
gtcaacggcaagttcaacgacaacgcctggcacgacgtcaaggtcacccgcaacctgaga
caggtgaccatctccgtggacggcatcctgaccaccacgggctacacccaggaggactac
accatgctgggctctgacgacttcttctacgtgggagggagccccagcaccgccgacctg
cccgggtctccagtcagcaacaacttcatgggctgtctcaaagaggtggtgtacaagaac
aatgatgtacggttggagctgtcaagactggctaaacagggagacccaaagatgaaggta
agtggggtggtgtcctttaagtgcgagagtgtggccactctggaccccgtgacctttgac
acccccgagtcctttgtggcactgagcaagtggtcagcgaagaaggccggatcgatctcg
tttgacttcaggaccaccgagccaaatgggctgatgcttttcagccatggcaaacctcga
cagcagcaacacaaggatccacgcacacctccgacaatcaaggtggatttttttgctatt
gagatgctggatgggcacctgtacctgctgctggacatgggctcgggaaccaccaagacc
aaggctatcgacagaaaggtcaacgacggagaatggtatcatgtggacttccagagggac
ggacgctcaggaaccatctcggtgaacagtgtgagaacagcgtacacggcgccgggtgac
agcgagatcctggacctggatgagactttgtacctcggaggactccctgaagaacgcgct
ggactcattttccctacagaggtgtggacggctctgttgaattacggttacgttggctgc
atcagagacctgtttgtggacgggcagagcaaagacatccggcggctggccgaggcccag
agagcggtgggggtgaagccctcgtgctcgagagacccgcccaaacagtgcctgtccaac
ccctgtcagcacaacggcgtctgcagggagggctggaatcgctacgtttgcgactgctcg
gggacgggctacctgggacgctcctgtgagagagacgccactatcatgtcctacgacggc
agcaagtttatgaaggtgcagttgcctttggcgatgcacaccgaggcggaggacgtctcg
ctgcgctttcgctcccagcgggcctatggcgttctcatggcaaccacgtcccggaactcc
gcagacacccttcgtctggagctggacgggggccgggtccgactcactgtcaacctagac
tgtatcaggataaactgtacagccagtaaaggcccagagaccatctttgcggggtcgggc
ctcaatgataatgagtggcacacggtgagggtagtccggcgtggcaagggcctcaaacta
accgtggacgacctgcagcctgtggaaggtcagatggcgggcgaccacacccagttggag
ttccacaatgtggagacgggtattgtgactgagaagcgcttcatgcctgccgtgccctcg
aatttcatcggccaccttcagggcctgacgctcaacggcatgccctacattgacctctgc
aaaaacggcgacatcgactactgcgagctgaacgccgtaatcggctacaagagcatcgtg
gctgaccccgtcacgttccgctcgcgctccagtttcatcacgctgcccacgctgcaggcc
tactactccatgcatctcttcatgcagttcaagaccacgtcacccgacggtctggttctc
ttcaacaggggagacggcaacgacttcatcgtgatagagctggttaaaggctacctacac
tacatctcggacctgggcaatggagcacacctgatcaagggcaactctaacagtccccta
aatgacaaccactggcacaacgtgcacatatccagagacactaacaatctccacacggtc
aagattgacaccaaagtcaccacgcagaccaccatgggcgccaagaacctcgacctaaag
ggtgacctgtacatcgggggcgtctccaaagagatgtaccgagaactgccgaagctggtc
cactcccgcgagggattccagggttgcctagcaacagttgatctaaatggtcggctcccc
gaccttttggctgatgcactggcaacaattggacaagtagagagaggctgtgaaggtccc
agcactacatgtcaggaagactcttgctcgaatcagggagtttgtttgcagcagtgggag
ggcttcacatgtgactgcagcatgacttcgtatgccggtccactctgcaatgatgctggg
accacttatatctttggccgtgatggaggcgtggtgatttacacgtggcctcctaatgaa
cgtccaagcaccagagcagaccggcttgccctcgggttcagcacccaacagaaacacgcc
atccttctccgggtggacagcgcgtcgggcctgggagactacctccagctgcagatagat
aaaggcaacattagagtagtatttaacgttggcactgatgacatcaacatcgaggagagc
tccaagtttgtcaacgacggaaagtaccacataattcggttcacccgcagcggaggcaat
gcaaccctccaactggacgacctgccagtcatagagcgctatccctcaggcaacattgat
aacgagcgcctggccatcgccagacagcgaatcccctatcggctcggtcgagtagttgac
gattggctactcgacaaaggtcgccagctgaccatcttcaacagccagacgacggtgcgt
gtcgggggaggcgagcaaagtgcgggcatgttccagggccagctgtccggaatctactac
aacggcctccgcatcctcaacatggccgctgaggggcatccgcacatccgagtggacggc
agcacgcgactggtgggcgacatgccgtcctcctccatcaccccgcagtccagtgccgcg
gctggaggcaaccgctctgactccgccccctccataagtgacatcacaaccaccacggcc
accagcaggaaacagggcgccacacagcagtcggcagacgacctgctggtggcgtcggct
gagtgtcccagcgatgatgaagacatcgacccttgtgaccccagttcagcccgccctccc
ctgccggaggtgaaggtgttcccagttccctccgaggtggttcgggaaagcagcagcacc
acgggcatggtggtgggcatcgtggccgccgcggccctctgcatcctcatcctcctctac
gccatgtacaagtaccgcaaccgcgacgagggctcctaccacgtggacgagagccgcaac
tacatcagcaactcggccacgcagcccaacggcagcgccaaggacaagccgctgggcatc
accaagatctccaagaacaagaagaacaaagacaaggagtactacgtctga
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integrated database retrieval system
