Pseudoliparis swirei (Mariana hadal snailfish): 130203859
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Entry
130203859 CDS
T09868
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130203859 (vps35l)
Membrane trafficking [BR:
pswi04131
]
Protein recycling
Others
Retriever complex
130203859 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5667
Motif
Other DBs
NCBI-GeneID:
130203859
NCBI-ProteinID:
XP_056286272
LinkDB
All DBs
Position
13:complement(19003259..19017456)
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AA seq
968 aa
AA seq
DB search
MAAVQWRSSGRSYDAELQRCRPEAAPVHFGDYHPLKPIMVTDTKTHRGARKGSTSSSSSS
SSSVAPDPLSSMMDGTDPLSMFAAASVVEAPAMSHSASTGDLGRKRREKEEEAVGPDFEP
WSSKRGEILARFTTTEKLSINLFMGSDRGKDPSPGSSAVSEKVRTRLEELDDLEEGSQKE
LLNLSQQEYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLIT
DILDTFGRLVYDRIWTMCSDPRPLTDLFTVDDVNDTAKETCLNWFFKIASIRELLPRLYV
EAAILKCNRFLNKCGIPETLPRLTAMIRGIGDPLVAAYARAYLCRVGMEVAPHLKESLNR
NFFDLLGSFRQIGGESVQQQLVLQRVELPEYLTLYSPAVNWILQCIAYRAPEPLLTEMTD
RCKKLGNNALLLNSVMRAFRPEFVAARATDFIGMIKDCDEAGFPKHLLFGSLGRSLACAD
PPEPERLAILNEAWKVVTKVRSPQDYVICAEIWVEFTCRHFSKREVNTVLADVIKHMTPD
RAFEDAYPQLQSVIRKILTYFHDFSILFSMERFLPFLDMFQKDSVRVEVCRSIMEIFIRH
QEEPSRDPVILNAMLHICKTMHDSVNALTLEDEKRSLALLIIGFIRMVSFGRDFEQQLSF
CVEARATFCNLESVLVQLIHTVNQLAMETSRVMRGSHSRKTAAFVRACAAYSFITIPSLS
SIFSRLSLYLLSGQVALANQCLSQADAFLKAAVGLLPEVPRSISVEGKLRPSESFLMDFI
NNFLSTLLVVPDHPEHGVLYLVRGLLNMVQDYTWEDNSDAKMRVYISALPLLAAMSQESY
LYSIPKVDSNETLYGGDPKFLSEINKLSETLVGQILDHLKTLGRDEQSTRRQGALAFSLF
GVLLAHGDLRNNKLSQLAVNLWNLSHKHGYCETRVSVRTLECIKHQARQADMTHLSDTVQ
RLALQSRT
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtgcagtggcgatccagcggacgcagctatgacgccgagctgcagagatgt
cgtcccgaggctgctccggtccactttggagactaccatcccctcaaacccatcatggtg
accgacacgaagacccaccgcggggctcgtaaaggcagcacctcctcgtcttcctcgtct
tcctcctcggtggccccggaccccctcagctccatgatggatgggaccgaccccctctcc
atgtttgcggcggcctcggtcgtcgaggctcccgccatgtcgcacagcgcctccactggg
gacctggggaggaagaggagggagaaggaggaagaagcggtcggaccagactttgaaccc
tggtcgtcgaaacgcggggagatcctggcccggttcaccaccacggagaagctctcgatt
aatctcttcatgggttcggaccgaggaaaagacccgagtccgggatcctccgccgtttcc
gagaaagtgcggactcgcctggaggagctggacgacctggaggagggttcccagaaggag
ctgctgaacctctcccaacaggagtacgccaaccgcatcgaggagctgaaccagtccctg
aaggaggcctgggcctcggatcagaaggtcaaagccctgaagatcgtcatccagtgctcc
aagctgctgtccgacacctcggtgatccagttctaccccagcaagttcgtcctcatcacg
gacatcctcgacacgtttggccggttggtgtacgacagaatctggaccatgtgttctgac
cctcgacccctgacagacttgttcacagtggatgacgtgaacgacacggccaaggagacg
tgtctcaactggttcttcaagatcgcgtccatcagggagctcctgccccgactatacgtc
gaggccgccatcctcaagtgcaaccgcttcctgaacaaatgcggtatcccggagacgctc
cctcggctgacggccatgatccgaggcatcggagaccccctggtggcggcgtacgccaga
gcgtacctctgcagggtgggcatggaagtggccccccacctgaaggagagcctgaaccgc
aacttcttcgacctgctgggcagcttccggcagatcggcggcgagagcgtccagcagcag
ctggtgctgcagagggtggagctgcccgagtacctgacgctctactcgcccgccgtcaac
tggatcctgcagtgcatcgcctaccgagctccagagccgctgctcacggagatgacggac
agatgcaagaagctgggcaacaatgctttgctgctgaactccgtcatgagggccttcagg
ccggagttcgtcgccgccagagccaccgacttcatcggcatgatcaaggactgcgacgag
gccggattcccaaagcatctgctgttcgggtctctgggtcgtagtctggcctgcgccgac
cccccagaacccgaaaggctggcgatcctcaacgaggcctggaaggtcgtcaccaaagtc
cgcagcccccaggactacgtcatctgcgctgagatctgggtggagttcacctgccgacac
ttctccaaacgcgaggtgaacaccgtcctggccgacgtcatcaaacacatgacccccgac
cgggcgttcgaggacgcttaccctcagctgcagtcggtgatcaggaagatcctcacctac
ttccacgacttctccatcctcttctccatggagcgcttcctgccgtttctagacatgttc
cagaaggacagcgtgagggtggaggtgtgccgatccatcatggagatcttcatcagacac
caggaagagcccagcagagacccggtcatcctcaacgccatgttgcacatctgcaagacc
atgcacgactctgtcaacgctctcactcttgaggacgagaaaagatctttggctctgctg
atcatcggcttcatccgcatggtgtcttttggacgggacttcgagcagcagttgagtttc
tgcgtggaggcccgagccaccttctgtaacctggagtcggtgctggtgcagcttattcac
acggtgaaccagctggcgatggagaccagccgggtgatgagagggagccactcccgcaaa
acggcggccttcgtcagggcgtgcgccgcctacagtttcatcaccatcccgtctctcagc
agcatcttcagccgtctcagcctctacctgctgtccggccaggtcgcgttggccaatcag
tgtctctcccaggcggacgctttcctgaaggcggcggtcggtctcctcccggaggttcct
cgctccatcagcgtcgaggggaaacttcgcccgtcagagagcttcctgatggacttcatc
aacaactttctgtccaccctgctggtcgtcccggaccatccagagcacggcgtgctctac
ctagtccgcggtttgctcaacatggtccaggattacacgtgggaggacaacagcgacgcc
aagatgcgggtctacatcagcgcgctgcccctgctggctgccatgagccaggagagctac
ctctactccatccctaaagtggactccaacgagacgctttatggaggagaccccaagttt
ctatcggagatcaacaagctgtccgagactctggtcggacagatcctggaccacctgaag
accctcggtcgggacgagcagagcacgcggcgtcaaggagcgctggccttctccctgttc
ggcgtgttgctggctcacggagacctgaggaacaacaagctgagccagctggctgtcaac
ctgtggaacctcagccacaaacacggctactgcgagactcgagtctcggttcgaaccctg
gaatgcatcaaacaccaggcccggcaggccgacatgacccacctgtcggacacggtccag
agactcgcccttcagtcccgcacctga
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