Pseudoliparis swirei (Mariana hadal snailfish): 130203876
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Entry
130203876 CDS
T09868
Symbol
wdr24
Name
(RefSeq) GATOR complex protein WDR24
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
130203876 (wdr24)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130203876 (wdr24)
Membrane trafficking [BR:
pswi04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
130203876 (wdr24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WDR55
WD40
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
MIOS_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_HPS5
ANAPC4_WD40
zf-RING_16
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
BBS2_Mid
Motif
Other DBs
NCBI-GeneID:
130203876
NCBI-ProteinID:
XP_056286290
LinkDB
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Position
13:complement(642140..646507)
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AA seq
789 aa
AA seq
DB search
MEKMSRVATAHSSSASSSRTMFCHLDAPANAISVCRDATQVVVAGRNIFKIYALEEEQFV
EKLNLRVGRKPSLNFSCADVMWHQMEENLLATAATNGAVVTWNLGKPSRNKQDQLFTEHK
RTVNKVCFHPSEVNMLLSGSQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSIKDYFTFA
ATFENGNVQVWDIRRPDRYERMFTAHTGPVFCCDWHPDDRGWLATGGRDKMVKVWDMTTT
RAKEIYCVQTIASVARVKWRPEKKFHLATCSMMVDHNIYVWDVRRPFIPFATFEEHKDVT
TGIVWRHQHDPHFLLSGSKDSTLYQHMFQDATRPVDKANPEGLCFGLFGDLAFAAKESLI
SSDANRKPYPGGDRRYPIFFFKKPDPTEQFDHVSSALSVFETDLDSNSMDWFVKTAQLYL
LCGKPFAELCEHNATVARELKRPQVSTTWTMLRIMFSDPANPTTPGLSHSLSKLGTLPLM
NSFNMKEMSSGIGPESRLERGKGESRQDNLHLEPGNLHISNNNEENEETEGSDGQAEYMF
GDAELDDDDLYSMEHENQTEEQEYTLPQEAFQLRHEIMDNPSAPEHLQQDKADSPHVSGN
EAEVTCLTPIESFSLISISQPLFSPHLPASFFCPIVREMLSFYAEQGDVQMAVSVLIVLG
ERIRKEVDDLTQEHWYMSYIDLLQRFELWNVSNEVIKLSTCSAITCLNQASTTLHINCSN
CKRPMSNRGWICDRCHQCASVCAVCHHVVKGLFVWCQGCSHGGHLEHIRNWLKSSAHCPA
GCGHLCEYT
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatgtcccgcgttgccacggcccacagcagcagcgccagcagctcacgaacg
atgttctgccacctggacgctccggccaacgccatcagcgtgtgccgggacgccacgcag
gtggtggtcgcgggccgcaacatcttcaagatctacgcgctggaggaggagcagtttgtg
gagaagctgaatctccgcgtcggacgcaaaccctcgctcaactttagctgcgccgacgtc
atgtggcaccagatggaagagaacctgttggccaccgccgccaccaacggggcggtggtc
acctggaacctggggaagccctctcggaacaagcaggaccagctgttcacagaacacaag
cgcaccgtcaacaaggtgtgcttccacccctcggaggtgaacatgctgctcagcggctcc
caggacggcttcatgaagtgcttcgacctgcgcaagaaggagtcggtcagcactttctca
ggtcagtccgagagtgttcgggacgtccagttcagcattaaggattatttcacatttgct
gcgacctttgagaacggcaacgtccaggtgtgggacatccggcggcccgaccgctacgag
cgaatgttcaccgcccacaccggcccggtgttctgctgcgactggcaccccgacgaccgg
ggatggctggcgacgggcggcagggacaagatggtgaaagtgtgggacatgaccacgacc
cgggccaaggagatctactgcgtccagacgatcgcctcggtggcgcgggtgaagtggcgc
cctgagaagaagttccatttagccacctgctccatgatggtggatcacaacatctacgtg
tgggacgtccgcagaccgttcattcccttcgccaccttcgaggagcacaaggatgtgacc
actgggattgtgtggcgccaccagcacgaccctcacttcctgctctctggctccaaggac
agcacgctctaccagcacatgttccaggacgccactcgtcccgtggacaaggccaaccca
gagggcctgtgcttcggcctgttcggggacttggccttcgcggccaaggagagtctgatc
agcagcgacgccaacaggaagccgtaccccgggggcgaccggcgctaccccatctttttc
ttcaaaaagcccgacccgacagaacagtttgaccacgtgtccagcgccctgagtgtcttc
gagacggacctggacagcaacagcatggactggttcgtgaagacggctcagctctacctc
ctctgtgggaagccgtttgctgagctgtgtgagcacaacgccacggtggcccgggagctc
aaaagacctcaggtttccacaacatggaccatgttaagaattatgttttcagacccagcc
aaccccacaacgcccggtctgagccacagcctcagtaaactgggcaccttgcctctgatg
aacagtttcaacatgaaggaaatgagttcggggattggcccagagagtcgactggagcgc
gggaaaggtgagagcaggcaggacaacctccacctggagcctgggaacttgcacatcagc
aataataatgaagaaaacgaggagacggagggcagcgacgggcaggccgagtacatgttc
ggggacgccgagctggacgacgacgacctctactccatggagcacgagaaccagacggag
gagcaggagtacacgctgccccaggaggccttccaactgcgccacgagatcatggataac
ccgtcggctccggagcacctccagcaggacaaggccgactcgccgcacgtcagcggcaac
gaggcagaggtcacgtgtctgacgcccatcgagtccttctccctcatctccatttcccaa
ccgctgttcagcccacatttaccggccagcttcttctgccccatcgtgcgggagatgctg
agcttctacgccgagcagggcgacgtgcagatggccgtgtctgtgctcatcgtcttgggg
gagcggatccgcaaagaggtggacgacctcacccaggagcactggtacatgtcctacatc
gacctgctgcagcggtttgagttgtggaacgtgtcgaacgaggtcatcaagttgagcacc
tgcagcgccatcacctgcctgaaccaggcgtcgaccacgctgcacatcaactgcagcaac
tgcaagcggccaatgagcaacaggggctggatctgtgaccggtgccaccagtgtgccagt
gtgtgtgccgtgtgccaccatgtggtgaaggggctgtttgtgtggtgccagggctgcagc
cacgggggacacctggagcacatcaggaactggctgaagagcagcgcccactgccccgcc
ggctgcggccacctgtgtgaatacacctga
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