Pseudoliparis swirei (Mariana hadal snailfish): 130203967
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Entry
130203967 CDS
T09868
Symbol
itga3b
Name
(RefSeq) integrin alpha-3b
KO
K06482
integrin alpha 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04510
Focal adhesion
pswi04512
ECM-receptor interaction
pswi04810
Regulation of actin cytoskeleton
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130203967 (itga3b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130203967 (itga3b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130203967 (itga3b)
04810 Regulation of actin cytoskeleton
130203967 (itga3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130203967 (itga3b)
04515 Cell adhesion molecules [BR:
pswi04515
]
130203967 (itga3b)
04090 CD molecules [BR:
pswi04090
]
130203967 (itga3b)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130203967 (itga3b)
Cell adhesion molecules [BR:
pswi04515
]
Integrins
Integrin alpha subunits
130203967 (itga3b)
CD molecules [BR:
pswi04090
]
Proteins
130203967 (itga3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
FG-GAP_2
LYRIC
Collectrin
LST1
Motif
Other DBs
NCBI-GeneID:
130203967
NCBI-ProteinID:
XP_056286413
LinkDB
All DBs
Position
13:complement(16491638..16518239)
Genome browser
AA seq
1048 aa
AA seq
DB search
MSPRLLLCVVLAVHHGTRPCAGFNIDERFPVVKEGPTKGSFFGFSVALHQQTDRKYLLLA
GAPKEKAVLKNVNETGAVYSCPITTDATDCSRMDLVSTTNPSEMVEGMWLGVTVASQRGQ
PVGRVLACGHRYVKITEEQRRMIGKCYVRSNDLTFDPNDDWQTYSYEVCNPNYDMELEGM
CNMGISGGMTDTDVYIGATGSYLWQGNVHVTWRDPDPANAWDSIGRDFGQLKRRYSYMGY
SVLEERKMLSRDEYTVVTGSPRDESKGSVMLGRKTDKKIEPALIIPGEQVGSYFGNSLAV
TDLNNDDWNDLIVGAPFYFDRMKDEGGAVYIFMNENGSFQETASVVLKGPSASAFGFAVA
PIGDVNQDGFQDFAVGAPFHNTGKVYIWMGSKNGISQTPSQVIEGKSVGNGKFHTFGYSI
NGGVDMDENGYPDILIGSLDDRMALLRARPVLHLTRNFTAKPRIVDPNQCLGNTPCITVT
LCMSFTLSNGNKNLKNITVKYTVEADMERRRSPRVRFLKDNDDTYTGSLNLLSSKSTCHK
LKLILVAPVRDKLEPVVFSLNMSLHKQNLKPRRSLQNLDSFPILSQEQQLTQRAEVNFQK
ECGSDNKCSSNLLLKAHFVDNEDKPYPSHGKFQILQFNSRIKIIRLMVNVTNFPAPGKPG
EDAHQAMLNVTIPDALRYSGVRSADHDVQCRLDGTVICELGNPLRGNEKVLLTLMFETAG
INLYTQEIESHLLLSTLSEQSDMKPVPVALLIKNTILPSFSIANALVKTEFSGTVTGESS
LVNTSDVGSLVEFTFNVNMRGQPLGDMGTLAVEFEWPFEVVNGKWLLYLTKISVTGESEV
DCNPPGEVVNLLNLSLSESGRKRTKRQIVVDDIDPTKPRIVEPQAAIKLLSLRKESYLLE
CSKGTARCVTFNCPLLNVTDSAKIHVQSRLWNSTMLEDYSNALRIRVRGQATLKLITDKP
TIRMDSQTTVFTVEIEPLESDEAPYELPLWIIISAAVAGILLLGIIILILWKCGFFQRAS
RREMYEAKAQKAEMKIQPSETEKLTEDY
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccagacttttgctgtgcgtggttctggctgtgcaccacgggacgcgaccgtgc
gctggatttaacatcgatgagcgcttccccgtggtcaaagagggaccgaccaaagggagc
ttcttcggattctcagtcgctctgcatcaacagacggacagaaagtacctgcttcttgca
ggagcacccaaagagaaagctgttttaaaaaatgtcaacgagacaggtgccgtctactcc
tgtcccatcacgacagacgccaccgactgctccaggatggacctggtcagcacaacaaat
ccatccgagatggtggagggcatgtggctgggtgtgacagtggccagtcagagaggccag
ccagtgggacgtgtgctggcatgcgggcatcgctacgtgaagatcacagaagagcagcgg
cggatgataggaaagtgctacgtcaggagcaacgacctgacctttgaccccaacgacgac
tggcagacttacagctatgaggtctgcaaccccaactacgacatggagctcgagggcatg
tgcaacatgggcatctcgggcggcatgacagacactgacgtctacattggcgctacaggc
agctacttgtggcaaggaaatgtgcatgtaacgtggagagatccagatccagcgaatgcc
tgggactctataggcagagactttggacagctgaaaagacgatacagttatatgggttac
tcggttcttgaagagaggaagatgctcagccgtgacgagtacacagtggtgacagggtct
ccgagggacgagtccaagggctctgtaatgttgggaagaaagaccgacaaaaaaatcgag
ccggcactcatcatccccggggaacaagtggggtcctactttgggaacagcctggctgtc
acagacctcaacaatgacgactggaacgacttgatcgtgggcgccccattttactttgat
cgtatgaaggacgagggaggggcggtgtacatctttatgaatgagaacggatcgttccag
gagaccgccagcgtcgtgctcaagggcccctcggcctctgctttcggcttcgcggtggct
cccatcggcgatgtcaaccaagacggattccaagactttgcagtgggagctccattccac
aacacaggaaaggtttacatatggatgggaagtaaaaatggaatctcacagacgcccagt
caggtaattgagggtaagtcggtgggaaatggaaagttccacacgttcggctactccatc
aacggaggggtggacatggatgaaaacggttatcccgacatcttgattggctctctggat
gaccgcatggctctgcttagggctcgaccagtccttcacttaacgaggaacttcactgcc
aagcccaggattgtggaccctaatcagtgtcttgggaatacgccgtgcatcacagtgact
ctgtgtatgtctttcactctgagcaatggaaacaaaaacttgaaaaatatcacggtgaag
tacacggtggaggccgacatggagaggagaagaagccctcgtgttcgtttcctaaaagat
aacgacgacacatacaccggctccctgaacctgctgtcctccaaatccacgtgtcataaa
ctgaaactgatcctcgtggcgcctgtgagagacaaactggagccggtggtcttctccctc
aacatgtccttacacaaacagaacttgaaacccagacggtccctgcagaacctcgactcc
ttcccgattctgagtcaagagcagcaactcactcagagagcggaggtcaactttcagaag
gagtgtggctcagacaacaaatgtagcagcaacctgctgctgaaagcccactttgttgac
aacgaggataagccttaccccagtcatgggaaattccagatacttcagttcaacagcaga
ataaagataatacggctgatggtgaacgtcaccaactttcctgctccgggaaaacctgga
gaagacgcccaccaggccatgctcaacgtcacgatccccgacgcactgagatactctggc
gtcaggtcagcggaccatgatgtacaatgccgcctggatggcaccgtgatctgtgagctg
gggaatcctctgagaggcaatgaaaaagtgttgctcaccctcatgtttgagaccgcaggg
atcaatttgtacacacaagagatcgagtcccacctgcttctgtccactctcagtgagcag
agtgacatgaagcctgtgcctgtggccctgctgattaaaaacaccatcctcccctccttc
tccatagccaacgcgctggtaaaaacagaattcagtgggacggtgacaggcgagtcctcc
ttggtaaacaccagtgacgtgggcagtctggtggagttcaccttcaacgtgaacatgagg
ggacagcccctgggagacatggggaccctggctgtggagtttgagtggcccttcgaggta
gtcaacggcaagtggctgctgtacctgacgaagatttctgtgacgggggaatcagaggtg
gattgtaaccctcccggagaagttgtcaacctacttaacctcagtttgtcagagagcgga
cgaaagcgcaccaagagacagatcgtggtggacgatatcgatccaacaaagccacggatt
gttgagccacaggcagccatcaaattgctcagccttcgcaaagagtcatacctgttggaa
tgctcaaaaggtacggcgcgatgcgtgacctttaactgcccgctgctcaacgtcacagat
tcagccaagattcatgtccagtcccgtttgtggaacagtacgatgctagaggactattcc
aacgctctgagaatcagggtcagaggtcaagccactctgaagctcattacagataaacca
accatcaggatggacagtcagaccaccgtgttcactgtagaaatagaaccactggaaagt
gatgaggcgccctacgagctcccgctgtggatcatcatctctgcagctgtagcgggaatt
ctcctcctgggaataatcattcttatactatggaagtgtggcttcttccagagggccagc
aggagggagatgtatgaggccaaagcccagaaggctgagatgaagatccagccctctgag
acagagaagcttactgaggactactga
DBGET
integrated database retrieval system
