Pseudoliparis swirei (Mariana hadal snailfish): 130203982
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Entry
130203982 CDS
T09868
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pswi04054
]
130203982
Pattern recognition receptors [BR:
pswi04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
130203982
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
LRR_6
SPRY
NOD2_WH
LRR_4
Motif
Other DBs
NCBI-GeneID:
130203982
NCBI-ProteinID:
XP_056286428
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All DBs
Position
13:complement(7567426..7573218)
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AA seq
1050 aa
AA seq
DB search
MKGTVQERPRQIPLMRSLNQRRKSPCYEGVDDIKHGAKECSSYTAQSEGIVVAPSFIGSS
VGNVNINFISRSRESIVSSKEALNHDSADICGAQQTQNDKIAQCQGKLKAALKRKFSHLL
EGMTKEANRIPLNKIYTELYITEGGSGEVNTEHEVRQIETASRIHVAQEKSIHCNHLFDP
PPGRDYCIRTVVTRGVAGIGKTVSTNKFTLDWAEGEANTNLAFVFPLSFRELNLMRKNSF
SLVELLSVLFPETKDTGVFTHGKGEMLFILDGLDESRLSLDFDKGDIVSDVTQKTTIALL
LINLIRGRLLPSALVWITSRPLASNQIPLEYVHRVTEVRGFNNPQKEEYFRRKIPDESLA
SKVIEHVKSCRSLHIMCHIPVFCWMAASVLEKKLPTADSKDTLKTLTQMYIQFLSLNVET
MKKRLPGRRESTADNVRDNLMSLGKLAFKELQKGHLIFYESDLILNGIKVSQASMFSGVY
TQIFNEQLAMCEEKMFCFVHLSVQEFFAALYVYLTFNNDNINVLVKKSSASRRFPFRDSS
ELILYKEAVEAALRSENGHLDIFLRFLLGLSMETNQTLLKHLMTSNRTRIRTRTEIIKHI
KGRIQQCPSPDRCLNLFHCLNELNDHSLVEEIQSYLSSGSLNQTKLSPAQWATLVFVLLT
SEEELSVFDLSNYTRSEEALLKLLPVVKTARVANLHACNLTQSCCENLANCINSSQVREL
DLGNNNLTDEGLIQLSNGLKNSKLETLRLRSCNLTEHSSDALASVISSASGQLKELDLSD
NDFQDVGVQKLSDGLESHHCKLEVLILSMCRVTEEGCTFLASALNSSRLRELDLSYNHPG
KLGVQLLSALQGDPQCSLQKLSVEQCGESRAQPAPKKYQHKLTLDPNTAHRELSLSEGDR
KAVRWTEQPYPDHPERFHFWNQVLCREGLTGRCYWETEWRGRAFIGVAYSRMCRKGDGQD
SWLGKNDCSWGLNCTKDGYQTWHNAVHTVVPIPPYSNKVGVYLDWSAGKLSFFRVSCGAL
TLLHTFHITFTEPVYPGFRLGWVDSAVYLC
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaactgtacaggaaagaccaagacaaataccattgatgaggagtctcaatcaa
agaaggaaatccccatgctacgaaggagttgatgacataaaacatggagcaaaagagtgt
tcaagctacactgctcagagtgaaggcattgtggtcgctccctccttcattggttctagc
gttggcaacgtaaacatcaatttcatctcaaggagccgagagtctattgtttcctcaaaa
gaagcattgaaccacgacagtgcagacatctgtggcgcccagcagacccagaacgataag
attgcacaatgtcaagggaaactaaaagccgctctgaagagaaagttcagccacttgcta
gaggggatgacgaaggaagcaaacaggatacctctcaataagatctacacagagctctac
atcaccgagggaggaagtggtgaggtcaacacggagcatgaggtgagacagattgagacg
gcatccaggatacatgtggcccaggagaaatctatccactgcaatcacctctttgatcct
ccacctggacgagactactgcattagaaccgtcgtcacgaggggagtcgctggcatcggt
aaaaccgtatctaccaataaattcactctggactgggcagagggggaagcgaacaccaac
ctggcatttgtatttcctctctctttccgtgagctgaatctgatgaggaagaacagcttc
agtctagtggagcttcttagtgtccttttccccgaaacaaaggatacaggagtcttcacc
cacggtaaaggcgaaatgctcttcatcctggacgggctggacgagagtcgtctttctttg
gacttcgacaaaggtgacattgtgtctgatgtgacgcagaagaccacgatcgcgctgctt
ctcatcaacctcattaggggaagactgcttccttcggctcttgtctggataacatctcgt
ccgctagcttccaatcagattcctctggagtacgtccatcgagtgacagaggtgcgaggg
ttcaacaacccccagaaagaggagtacttcaggaggaaaatccctgacgagagcttagca
agcaaggtgatcgagcatgtgaaatcctgcaggagtcttcacatcatgtgccacataccg
gtattctgctggatggcggcgagtgttcttgagaagaagttgccgacggcagacagtaaa
gacacgctaaagaccctcactcagatgtacatacaattcttgtccttgaacgtggagacc
atgaagaagaggcttcctgggaggagagagtcgaccgctgacaacgtgagagataacctc
atgtcgctgggcaaactggccttcaaggagctccagaagggccacctgatcttctatgag
agcgatctgatcctgaacggtataaaagtctctcaggcgtccatgttctccggcgtctac
acgcagatcttcaacgagcagctggcaatgtgcgaggagaagatgttctgcttcgtgcac
ctgagcgtgcaggaattctttgctgcgctgtacgtctacctcacgttcaacaacgacaac
atcaacgtcctggtcaagaagtcctccgcttccaggcgtttcccgttcagagattcatca
gagctgatcctctacaaagaagcggtggaagcggctttgcggagcgaaaatggacatctt
gacatctttctgcgcttcctcctgggcctgtctatggaaacgaatcagactctgttgaag
catctgatgaccagcaacagaacccgcataagaacaagaacggagatcattaaacacata
aaggggagaatccagcaatgtccgtccccagacagatgcctgaatctctttcactgcctc
aacgagctgaacgaccactctctcgtggaggagattcagagctacctcagctcgggcagt
ctcaaccaaaccaaactttcacctgcccagtgggccactctggtctttgtgttactgaca
tcagaagaggagctgagtgtgtttgacctgagcaactacaccagatcagaggaagctctt
ctcaagctgctgcctgtcgttaaaacagccagagtggcaaatctacacgcatgtaacctc
actcagagttgctgtgaaaacttggcgaattgcatcaactcatcccaagttagagagctg
gacctgggtaacaacaacctgaccgatgaaggactaatacagctctctaatggactgaag
aacagcaaattggagacactcagactcaggagctgcaacctcacggagcacagctccgat
gccctggcctccgtgatcagctcagcatccggccagctgaaagagttggatctctctgac
aatgacttccaggatgtcggagtccaaaagctctccgacggactggagagtcatcactgt
aaactggaagtgctcattttgtccatgtgcagagtgacggaggaaggctgcacgttcctg
gcatcggctttgaactcctctcgtctgagagagctcgacctgagctacaaccaccctgga
aagttgggcgtgcagctactttctgctctgcagggcgacccacaatgcagcctgcagaaa
ctcagcgtggagcagtgcggtgaatccagggctcagccagctccaaagaaataccaacac
aaactcaccctggacccaaacacagcacacagagaactttctctgtccgaaggagacagg
aaagcggtgcgttggaccgagcagccgtatcctgatcacccggaaaggtttcacttctgg
aatcaggtgttgtgcagggaggggctgaccgggcgctgctactgggagaccgaatggaga
gggagagctttcataggagtcgcctacagcaggatgtgcaggaagggagacggccaggac
agttggttaggcaaaaatgactgttcctggggactaaactgcaccaaagatggctaccag
acctggcacaatgccgtgcacactgttgtacccatcccaccctattcaaataaagtaggc
gtgtatctggactggtcagcggggaaactgtccttcttcagggtgtcctgtggtgcactg
accctcctccataccttccacatcaccttcactgagcccgtctacccagggtttcgactt
ggctgggtggactccgctgtgtacctgtgctag
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