Pseudoliparis swirei (Mariana hadal snailfish): 130203993
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Entry
130203993 CDS
T09868
Name
(RefSeq) cadherin-related family member 1 isoform X1
KO
K16501
cadherin-related family member 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130203993
Cell adhesion molecules [BR:
pswi04515
]
Cadherins
Cadherin related
130203993
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GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
130203993
NCBI-ProteinID:
XP_056286437
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Position
13:6113994..6126019
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AA seq
878 aa
AA seq
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MLPVLPISKCVIACLCCDHRKLHPNIFIIHFHPPLTPCFLFLPFLARQSDYAPYFYDNGP
SSKHGNMALRSISEDTPVGTQIYILNGTDPEGDPVRYGLTFEMGSKEYFRVDSKSGNVTL
IQELDREKLDEISMLVSITDGRNKVVEKVRVFVTDANDEPPEFQNLPFIIDIPEDTAPGS
SIFRVQAADRDMGSGGSVSYYLQTSPFAKFTIDGNSGILRVKPGETLDYETTPTHFVTVV
AKDGGGKYKGRQQVLTSTATMTINVLDAQDMPPSFIGTPYFGYVYEVSVPGSEIFTVYAK
DGDQGKPNTIQYSIMNGSDGVFDMNSTSGCITLSIYPTLLRNELYEIIVKASEVGTKDQQ
LDYDVTTVTVRVVDLNNHPPTFYGQNGPQSNFEVTMYEHPPSGEILRGFKITVNDSDQGA
NAKFKLRLVGPSRVLRVVPQTVLNEAQVTIIVEDSSGIDYEKGTTLSFKLLAVEIDTPER
FSATADIVINLLDTNDNIPKFTAEYYIARVPENSIGGSSVVSVTANDPDSGPWGEVKYTI
YGSGSDLFAIDPSSGLISTQPWTSLDAEVRSKYNFYVKAEDSEGKDSLSEVFVTVLDMND
HSPAFDEKLLEKTMIIGIPVRVEAVDEDAESPNNVIEYSIMTADPDNAFDINADTGEINL
KPYITSMEIVQNITKQKDCKWSLVVQARDRGSPSFSTTAVVNIDITEAQTSLKGPMADFL
LKSRDNPMKALGMVTIVISLLVGVTALISAGMYMRNLKSNRIMPTRRIIKRRPRDQQPWI
FNMPVVQFSNPADKFLFVNQERSPRPKPPPPSAPPPPCITRPYERPRAVPTISGVLASKG
SKKAKSNRRKEGNISSALVAELKKKLEQKMIESNQSYY
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctgtacttcctatatctaaatgtgtgatagcatgtttgtgttgtgatcataga
aagttgcatccaaatatatttataattcatttccatcctcctcttactccctgctttctg
ttcctgccctttttagcaaggcaatcagactatgctccgtatttttatgataatggaccc
agcagtaaacatgggaatatggccttgcgcagcatttctgaggatacaccagttgggaca
cagatatacattctgaatggtacagatccagagggagatccagtgcgatatggtctgact
tttgaaatgggctccaaagaatattttagggtggactccaaatcaggaaatgtgactctg
attcaggagctcgacagggagaagctcgatgaaatctccatgctcgtgagcataacagat
ggtcgcaataaagtagttgagaaagttcgagtgtttgtcactgacgccaatgatgaacca
cctgaatttcaaaatctgcctttcattattgacatcccagaggatacggctccagggagt
agcatcttcagagtccaagcggcagatcgagatatgggctcaggaggcagtgtctcctat
tatttacagacctcaccgtttgccaagtttaccatcgatgggaacagcgggatcctcaga
gtcaaacctggtgagactttggactacgagaccacgcccactcactttgtgaccgtggtt
gcaaaggatggaggtggaaagtacaaagggaggcaacaggttttaacctccacggccacc
atgaccatcaatgtgcttgatgcccaagacatgcctccatccttcatcggaaccccttac
tttggctacgtctatgaagtctcagttcctggttctgaaatattcacagtgtacgctaaa
gatggagatcaaggcaaacctaacacaatacaatattccattatgaatggtagtgatggt
gtctttgacatgaatagcaccagtggatgcatcaccttgtcaatttatccaactctgctg
agaaatgaactctatgaaattatagtcaaggcgtctgaggtaggcactaaggatcagcag
ctggactatgacgttaccactgtgacggtccgggtggtggatctcaacaaccatcctccg
accttttacgggcagaacggaccacagagcaactttgaggtcaccatgtacgagcatcct
ccctccggggagatcctgcgaggctttaaaatcaccgtcaatgactcagatcagggagcg
aacgctaaatttaaactgagactagtggggccgagtcgagtgctgcgagtggttccccag
acagtcctcaatgaagcacaggtgaccatcattgtggaagactcatctggcatcgactat
gaaaagggcacaacgctctcttttaagctgctggcggtggagatcgacactcctgagcgg
ttcagtgcaacagccgacatcgtgatcaacctgctggacaccaacgacaacatccccaaa
ttcacagccgagtattacatcgccagggtccctgagaactctatcggaggctccagcgtt
gtgtctgtaacggcaaatgatccagattcagggccctggggtgaagtcaaatacacgatt
tatggatcaggatcagatttgtttgccatcgacccgtcatcgggcctcatctccacgcag
ccctggaccagcctcgatgcagaggtccggtctaaatacaacttctatgtcaaggctgaa
gattcagagggaaaggacagcttgtccgaagtctttgtcaccgtcctcgacatgaacgac
cattctccggcatttgatgagaaactcctggaaaagactatgatcattggtatacctgtc
agagtagaggcagtggatgaagatgcagagtctccgaacaacgtcattgaatactccatc
atgacggccgatccggacaacgcgtttgatatcaacgcagacactggagagatcaacctg
aagccgtacatcacgtccatggagattgtgcagaacatcaccaagcaaaaggactgcaag
tggtctctggtggtccaggccagggacagaggctcgccgtccttcagcacaacagctgtg
gtcaacatcgatatcacagaggcgcagacatctctcaaggggcctatggcagacttttta
ttgaaaagtagggacaatccaatgaaagctctaggcatggtcactattgtcattagctta
ctggtgggagtgactgccttgatctctgcaggtatgtacatgcgaaatttaaagtcaaac
aggatcatgccgacacgtcgcatcattaagaggagacccagggaccagcagccctggatc
ttcaacatgcctgttgtccaattcagcaaccctgcagataagttcctttttgtcaaccaa
gagagaagcccacggccgaagcctccccctcccagtgctcccccgcccccgtgtatcaca
cggccatacgagaggccccgcgcggtcccaaccatatctggtgtgctggcctccaaaggt
tccaaaaaagcaaaatcgaatcgccgtaaagagggaaatatcagctctgctctggtggcg
gagcttaaaaagaagcttgagcagaaaatgattgagagcaaccaaagttattattaa
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