Pseudoliparis swirei (Mariana hadal snailfish): 130204052
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Entry
130204052 CDS
T09868
Name
(RefSeq) paired box protein Pax-2a-like isoform X1
KO
K15608
paired box protein 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130204052
04131 Membrane trafficking [BR:
pswi04131
]
130204052
03036 Chromosome and associated proteins [BR:
pswi03036
]
130204052
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
130204052
Membrane trafficking [BR:
pswi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
130204052
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
130204052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
HTH_Tnp_IS1
Homeodomain
Motif
Other DBs
NCBI-GeneID:
130204052
NCBI-ProteinID:
XP_056286515
LinkDB
All DBs
Position
13:complement(5956174..5986511)
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AA seq
402 aa
AA seq
DB search
MDIHCKADPFTAMHWHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVS
HGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAE
GVCDNDTVPSVSSINRIIRTKVQQPFHPSPDGSSLSTPVHTIVPSTTSPPVTTASNDPAG
SYSINGILGIPRSNGEKRKRDEDGSDGSGPNSDSQGSVESLRKHLRADAFTQQQLEALDR
VFERPSYPAVFPTSEHIKPEQANEYSLPALNSSLNEVKPSLSSSVHPDLGPSVSQSYPVG
RDMANTTLPGYPPHVPPTGQGSYPSSTLAGMVPGSEFSGNPYSHPQYTTYNDGWRFSNPA
LLMRHREAPPLPLLPLPMTVTSYHGNHINLQDHGLSLHIAPV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagcggaccccttcacggcgatgcactggcacgggggtgtgaac
cagctcggcggggtgtttgtgaacggcagacccctcccggacgtggtgaggcagcggata
gtggagctggcccaccagggcgtccggccctgcgacatctccagacagctgcgggtcagc
cacggctgcgtcagcaagatcctgggcagatactacgagactggcagcatcaaaccaggt
gtgattggtggctcgaaaccgaaagtggccacgccaaaggtggtggacaaaatcgcagac
tacaagagacaaaatccaaccatgtttgcgtgggagatcagagacagacttcttgcagag
ggcgtctgcgacaacgacaccgtccccagcgtctcgtccattaacaggatcatccgaaca
aaagtccagcagcctttccatccatctcctgacgggtcatccctgtcgacaccagtccat
actatagtaccaagcacaacctctccgcctgtaaccaccgcctccaacgacccggcagga
tcctactccatcaatgggattctgggtattccacgatccaatggtgaaaagaggaaaaga
gatgaagatggttcagatggttctggcccaaacagtgattctcagggtagtgtggagagt
ttacggaaacaccttagggcagatgccttcacccagcagcagctggaagcgctggaccgg
gtctttgaacgtccctcgtaccctgccgtcttccctacatcggagcacatcaaacctgaa
caggctaatgagtactcgctccctgccctgaattccagtctgaatgaagtcaagcccagt
ttatcctccagcgtccacccagacctgggccccagcgtgtcgcaaagctaccctgtaggt
cgggatatggccaacacaactttacctggataccccccccacgtcccccccacaggtcag
ggcagctacccgtcttcaacgctcgctggaatggttcctgggagtgagttttcggggaac
ccctacagtcacccgcagtacacaacctacaatgacggctggcgattcagcaacccagca
ttactaatgcggcatcgagaggctccgcccctcccactgctgccactgcctatgaccgtc
actagttaccatggcaaccacatcaacctgcaggaccatggccttagcctccatattgcc
ccggtgtga
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