KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130204071
Entry
130204071         CDS       T09868                                 
Symbol
patl2
Name
(RefSeq) protein PAT1 homolog 2
  KO
K24823  protein PAT1 homolog 2
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pswi03019]
    130204071 (patl2)
Messenger RNA biogenesis [BR:pswi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     130204071 (patl2)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 130204071
NCBI-ProteinID: XP_056286552
LinkDB
Position
13:complement(2417873..2423973)
AA seq 722 aa
MNDTEQQKEAENVSPPQWPENGEAWSDGEDDMDCGLLQAMAEDDEEKNVYNEETFGMDFD
AQGTTEDPNSSRLEFKEPPPPLPPSPTPPPPTDPKPSPRLSSHSPPRRSPQYLPRFPPGQ
RGRFRGQRGGLGRCQMFEDPAVMRTVEGRPSLKTLDGAIVEIGNAVFQKTLEDEYMSPSF
RKTRRVSESILQDSAVVCVIDGHRGGGQRLNANFLDLPYPVSSFRGRRGEPRGSFIRSQF
GQRGPNQIHASMLHPSMLPASPIFSRQPLTPRQHYNQTGGFMFPTSQPCPSSPQPLTSKM
MHLRFGADSPRPSPVYSPSSNPMQHFRNPGLVTQLHPQHKRLLGQKQHIFQRKSEDWDPY
CNLMTAKEKEWIIRLQMIQLQSENPYHEDYYYQEFYRRKEAKMAEEELGIRSKRETTKLT
TPYITKTDVYAPVVHIEGSLGQVAVSTCYSPRRAISAVHSVHTRGPLEEQQDIRQQRLEV
LSKIEKLFMVLLEVEEMARVKNTVLTEAEETKLIAKSQGKVEYIYSELQHHNPLDSGVEF
LPFLLVSKGKKLLARLFPFLKHETALKVLSIVTSNLPTLMSRDPEETLPVLYPPLRNVIG
GLTFSQLIVVLNNLTSESLTTSEPLILACQNKFGLSLLYALLSHGEKLLSSGVPLEPSIG
DFETWTDTIFQVAGQLSQCSLVEPLLLPSNLLTLFCRYLDKRTVNQLKNNIESATGFVAL
PS
NT seq 2169 nt   +upstreamnt  +downstreamnt
atgaatgacacagaacagcaaaaagaggctgaaaacgtgtctccgcctcagtggcctgag
aatggagaggcctggagtgatggagaggacgacatggactgcgggcttctgcaggccatg
gctgaggacgacgaggagaaaaacgtctacaacgaggagacctttggaatggatttcgac
gcacaagggaccacagaggaccccaacagcagtcggcttgagtttaaagaacctcctcct
cctctacctccgtcaccaacaccgccacctccaacagatcccaaaccatcaccccgcctc
agctcccactctcctcccagacggagtccacagtatctgccccggtttcccccagggcag
cgtggcagattcagggggcagagaggagggctgggcaggtgccagatgtttgaagacccg
gctgtgatgaggacagtggaggggcgaccgagcctcaagactcttgacggggccatagtg
gaaattgggaatgccgtgttccagaagactttagaagatgaatacatgtcgccctccttc
agaaagactcgaagagtctcagaatcaatacttcaggacagtgctgtcgtctgtgtgatt
gatggtcacagaggaggaggtcaacgcctgaacgccaacttcctggatttgccatatcct
gtctcttccttcaggggcaggaggggggagcccagaggatccttcatcagaagtcagttt
ggccaaagaggccccaaccagatccatgcgtccatgcttcatccgtccatgttgccagca
tcacccatcttttcacgtcaaccgctaaccccacggcaacattacaatcagacagggggc
ttcatgtttcctacaagtcagccttgcccctccagtcctcagcctctgacttcgaagatg
atgcaccttcgctttggtgccgactcaccaagaccgtctcccgtctacagcccctcgtct
aatccgatgcagcatttcaggaaccccggcctcgtcacccagctgcatcctcaacataaa
cgacttcttggtcaaaagcagcacatattccaaagaaaatctgaggactgggatccttac
tgtaatctcatgacggctaaagagaaggaatggatcatccggctgcagatgattcagctg
caaagtgagaacccgtaccatgaggactactactaccaggagttctatcgacgaaaagaa
gcgaagatggcggaggaagagctgggcatcaggagcaagagggagacgaccaagcttacc
acgccttacatcacgaaaaccgacgtctatgcaccagtggtgcacattgaaggctctctg
ggtcaagttgctgtgtccacatgctactcccctcgccgagccatcagtgcggttcattcg
gtccatactcggggtccacttgaggaacaacaagacatcagacaacagcggttggaggtc
ttgagcaaaatagaaaagttgttcatggttctgttggaggtcgaggagatggcgagggtg
aaaaataccgttttgactgaagcggaagaaaccaaattgattgcgaaatcccaggggaaa
gtggagtacatctactccgaactgcaacatcacaatcccctagattcaggcgtggagttt
cttcctttcctgctggtctcaaaaggcaaaaagctcctcgcccgtctgttcccgtttctg
aaacatgaaactgcactgaaagtcttgagcattgtgacctctaaccttcctacgctgatg
agcagagatccagaagagacccttccagtgctctacccgcctcttcgaaatgtgattgga
ggcctgacgttcagtcaactcatcgttgttctcaacaatctgacatctgagtctctaacg
acatcggagcccctcattctggcatgtcagaacaagtttggactgtccctgctgtacgct
ctcctgtcccatggagagaagctgctgtcctcgggcgtcccgttggagcccagcatcggc
gactttgagacctggacggacacaatattccaggtggcgggacagctgtcccagtgttcc
ctggtggagccgctcctcctgccctccaacctgctcactctcttctgccgttacctggac
aagcgcactgtgaatcagctgaaaaacaacattgagtctgcaactggatttgtggctctc
ccgtcttaa

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