KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130204091
Entry
130204091         CDS       T09868                                 
Name
(RefSeq) elongin-B-like
  KO
K03873  elongin-B
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130204091
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pswi04121]
    130204091
   03400 DNA repair and recombination proteins [BR:pswi03400]
    130204091
Ubiquitin system [BR:pswi04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     130204091
   Cul5 complex
     130204091
DNA repair and recombination proteins [BR:pswi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     130204091
Motif
Pfam: ubiquitin Rad60-SLD LED_rpt
Other DBs
NCBI-GeneID: 130204091
NCBI-ProteinID: XP_056286583
LinkDB
Position
13:complement(2438616..2442140)
AA seq 119 aa
MDVFLMIRRHKTTIFTDAKESTTVYELKRIVEGILKRPPEDQRLYKDDQSLEDSKTLGDC
GFTNQTARPQAPGTVGLAFRVNDEMFEQLHIEAFSSPPDLPDVMKPQDSGSTGNEHAVQ
NT seq 360 nt   +upstreamnt  +downstreamnt
atggacgtgttcttaatgatcaggcgtcacaagaccacgatctttacagatgccaaggag
tctaccactgtctatgagctgaagcgtattgttgaaggtattcttaagagaccacctgaa
gaccagaggctgtacaaagatgaccagtcgctagaggacagcaaaactcttggagactgt
ggcttcaccaaccagactgccagacctcaagctccgggtacagttggtctggccttccgc
gtaaatgatgagatgttcgaacagctccacatcgaggccttctccagccccccagatctc
cccgatgtgatgaagcctcaggactccggtagcactggcaacgagcacgccgtgcagtga

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