Pseudoliparis swirei (Mariana hadal snailfish): 130204116
Help
Entry
130204116 CDS
T09868
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013
Nucleocytoplasmic transport
pswi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130204116
03015 mRNA surveillance pathway
130204116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130204116
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130204116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
RAP1
DDHD
Motif
Other DBs
NCBI-GeneID:
130204116
NCBI-ProteinID:
XP_056286618
LinkDB
All DBs
Position
13:19669254..19672563
Genome browser
AA seq
263 aa
AA seq
DB search
MAPSPTKRKEDDKSKQRVKEKSGAAKDGADKDRSRDKNRTRRSASSGSSSSSSSSSSGSS
SSSASSHSGSSRSSSSSSSSSPSPSRQRHNNRRRSRSKSKSAKKDDRDRRRRSPTPKPTK
VYLGRLTRNVIKEHIQEIFSTYGKIKMIDLPMNRVHPLLSKGYAYVEFETSDEAEKALKH
MDGGQIDGQEITVTAVLTPTVRPPPRRLSPPRRMPPPPPMWRRTPPRMRRRSRSPRRRSP
VRRRSRSPGRRRHRSRSSSNSSR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcgccatccccaaccaagaggaaggaggacgacaagagcaagcagcgcgtgaaggag
aagtcgggcgccgccaaagacggagccgacaaagaccggagccgagacaagaaccgcacg
cggcgcagcgcgtccagcggcagcagcagcagcagctccagcagcagctccggctcctcc
agctcctccgcctccagccactccggctcctcccgctcttcttcctcctcctcgtcctcc
tcgccgagccccagccgccagcgccacaacaacagacgccgctcccgctctaagtcaaaa
tcggcgaagaaggacgacagggaccgtcggcgtcggagccccacgcccaaacccaccaag
gtctacctgggccggctcaccaggaatgttatcaaggagcacatccaggagatcttctcc
acttacggcaagatcaagatgatcgacttgcccatgaaccgcgtccacccgctgctctcc
aagggctacgcctacgtggagtttgagacctccgacgaggcggagaaggccctgaaacac
atggacggaggtcagatcgacggccaggagatcaccgtcacggccgtgctgacccccacc
gtgcgcccgcccccccgccggctgtcgcccccccgccggatgccgccgccgccgccaatg
tggcgccgcacgccgcctcgcatgaggaggaggtctcgctctccacggcgtcgctctccg
gtccgtcgcaggtctcgctcgcccggacgccgccgccatcgctcccgctccagctcaaac
tcctcccgctag
DBGET
integrated database retrieval system
