Pseudoliparis swirei (Mariana hadal snailfish): 130204125
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Entry
130204125 CDS
T09868
Name
(RefSeq) alanyl-tRNA editing protein Aarsd1-like isoform X1
KO
K07050
misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130204125
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Trans-editing factors
130204125
Prokaryotic type
130204125
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA_SAD
tRNA-synt_2c
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
130204125
NCBI-ProteinID:
XP_056286636
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All DBs
Position
13:16625522..16634786
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AA seq
411 aa
AA seq
DB search
MAFQCQRDCYMKEFVTSVVSCCPAELKHEVNGKKEKLKGFNVKLQDTILFPEGGGQPDDH
GLIGDVPVLRVTRQGPDAVHFVSSPLEVGQEVQVKVDWERRFDHMQQHSGQHLISVLAEN
LFGYETTSWELGRQRGVIELDTPSVKPAQLQALEEALNEKIRLHIPVTVQLLSRDDPSVE
KVRSRGLPDDLAWPIRIIDIEGVDANMCCGTHVSNLSHLQVIKLQGTEKGKKNKTNLIFL
VGNRVLKYAEKSHSTERSLVALLNNGPNEHVQVVEKLQKSVKLLQKTNVSLLRDMAVLIT
ENFKNNPQRGNFFSFHKKGGDHEFMNIIANEINIEETLVFLTVGEEKGPALFLLAGPSGQ
VAEMGPRVLEMLQGKGAGKNGRFQGKVNSLARRGEVEALLQQHCKHHTSEE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcttttcagtgtcaacgagactgctatatgaaagagtttgtgacctcggtagtgtcc
tgctgcccagctgagctcaaacatgaagtcaatggaaagaaagaaaaactcaagggcttc
aatgtgaagctccaagacaccatcttgtttcctgaaggaggcggccaaccagatgaccac
gggctgattggagatgtcccagtcttgagggtgacgaggcagggacctgacgccgtgcac
tttgtgagctcacctctggaggtgggtcaggaggtgcaggtgaaggtggactgggaaagg
aggtttgaccacatgcagcaacactcaggtcaacatttgatctcggttttggcagagaac
ctttttggatacgagaccacatcctgggaactggggcgtcagagaggggtcattgaactg
gacactccctctgtgaagcctgcccagctccaggctctggaggaagccttaaacgaaaag
atcagactccatatccccgtcaccgttcagctcctctctagagatgatccttctgtggaa
aaggtgaggagtcgggggcttccagacgaccttgcatggccgataaggatcatcgatatc
gagggtgttgatgccaacatgtgctgcggaacccatgtgtccaacctcagtcacttacag
gttataaagctacagggaactgagaaaggaaagaaaaacaaaacaaacctgatcttcctg
gtaggaaacagggttttgaagtatgccgagaaaagccacagcacagagcgatcactggtg
gctctcctgaataatggacccaatgagcacgttcaggtcgttgagaagttgcagaagtct
gttaaactactacaaaaaactaacgtgagcctgctacgagacatggccgtcctcatcacc
gagaactttaagaacaacccccaaagaggaaacttcttcagcttccacaagaaaggcggc
gaccatgagtttatgaatattattgccaatgaaataaacattgaggaaactttggttttc
ctgactgttggagaggagaaggggcccgctttgtttctcctggctggacccagtggacaa
gtggctgagatgggcccgcgggtgttggagatgctccaagggaagggggccggaaaaaat
ggacgtttccaaggaaaagtcaacagcttggctcggagaggggaggtggaggctctcctg
cagcagcactgcaaacatcacacatcagaggaataa
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