Pseudoliparis swirei (Mariana hadal snailfish): 130204150
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Entry
130204150 CDS
T09868
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130204150 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130204150 (usp42)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130204150 (usp42)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130204150 (usp42)
Ubiquitin system [BR:
pswi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130204150 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
130204150
NCBI-ProteinID:
XP_056286682
LinkDB
All DBs
Position
13:complement(17034010..17044055)
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AA seq
1201 aa
AA seq
DB search
MTIVDRSSEKSDHESVGCKRSPFTSGDVGMDGSCSSSWAMGPTVSSDSPRLKAAGGCLGP
TPGAAVYNSTPSSVDRSKEQVVSGGDGIDSPQKVLFPPERLNLKWTQVHRIGAGLQNMGN
TCFLNSALQCLTYTPPFANYLLTREHSKTCHEPGFCMMCTMQNHIIQVFTNSGNVIKPIG
VLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTYIHQVFGGYLR
SRVKCLNCKAVSDTFDPFLDITLEIKTTPSVSKSLEQFVKPEQLDGENAYKCTKCKKMVT
ASKRFTIHRSSNVLTFSLKRFANFSGGKITKDVKYPEYLDLRPFMSQAQGEPQVYGLYAV
LVHSGFSCHAGHYFCYIKASNGQWFQMNDSSVSVSDLRSVLNQQAYVLFYIKSSDGKKAG
DYSHMSHNPSIPGQSSPRPVVIPRINTTVHPHNNNSGFIGPQLPPHMTKRNLHVNGNGSL
RDYPSNSKPSTSSSVADKPSHGLASASSSSSVSHSISRPTMIPDQDKRQKLSFFIGQGKP
NRPSSSCSYSQPSSASSSSSSSSSSSLSSSQSTSDVRFVPRQLNLGNGMSRSNGAHHAGG
NGASFLVPYGQESSEESDQENCGTLEKGFLATSHFNGNKRTGEVFDHSTQATNGQLGALH
NGNGINRPTNGLSAPSQNGHHYEHHKVNGHSTPDKVSGSNHGSSSSVATAAANGLDSDHS
LTSKEAPGSASPQATSSQSIHPAAGESQTLSTPDTRATNVSEPLPPHTASSAVGSPPSAA
ATKTTSVSSKESASSSARHRSPTALSIPPGRSPNTNGASAAPENVGRGVEEARDAPQSGE
LSAETGGRTEAPEQHQPKPSSRGNEVHTHPDGERDRLHSDCSRERERHYRDRSHERESVG
DRHRHRRDSRDDHQHHQRPHKDRFPPASHSSRDWEPEHRWERTTHHPRERDRDRCSNHYH
HYHDRRYRDDRDERRGGGYPYGEKSHGRERWRQDGREPRALKDKSNGRERDYHPSKEDPS
SPATDTSTKSKGSSPRARLSSFESDQNHKRTNDPLSKERDDSSEVRRSRKHKKSKKKKKS
KDRHRESGSAEVDSDGANDSKKKKRRQRSPGAARSHKSSEEKESRKRRYDDDKEEKRDGA
SSSPEKRRRSDYADGSREHLLPSSHTSPTHGSTHHHLNGYKGNGYGHINGDSHGFSSGLK
H
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagaaaagtctgaccacgagtcagtcgggtgtaagcga
tctcccttcaccagtggagacgtggggatggacgggagctgttccagcagctgggctatg
ggtccgaccgtgtccagcgactctccgcggctgaaggctgcaggaggctgtctgggcccg
acgcctggagctgcagtctacaacagcacgccctcctctgtggaccggtccaaggagcaa
gtggtgagcggtggtgatggcattgactcgccccagaaggtcctctttcctccagagcga
ctcaacctaaagtggactcaggttcaccgcattggggcaggcctgcagaacatggggaac
acctgctttctcaactcggccctgcagtgtctcacctacactcctccatttgccaactat
ttgctgacacgggagcactccaaaacatgtcacgagccgggtttctgtatgatgtgcacc
atgcaaaaccacatcattcaggtctttacaaactctggaaatgtcattaagcccattggt
gtgctcaatgagctcaaaaggattgcaaagcacttccgctatggaagccaggaggatgcc
catgagttcctgcggtacacagtggatgctatgcaaaagtcctgcttacctggaaccaaa
ttggaccggcaaacgcaggcaaccacttacattcatcaagtgtttggcggctacctccgg
tccagagttaaatgtttaaactgcaaagcagtctctgatacatttgacccttttctagat
ataactctggaaattaagacgactcccagtgtctccaagtctctggagcagtttgtcaag
ccggagcaactggatggagaaaacgcctacaaatgcaccaagtgtaaaaaaatggtcaca
gcctcgaagagatttaccatccaccgcagctcaaacgtgctcaccttctcactcaaacgc
ttcgcaaacttcagcggaggcaaaatcacaaaggatgtcaaatatccagagtacctggac
ctgcggccctttatgtctcaggcccaaggggagccgcaggtctacgggctgtacgctgtg
ctggtccactctggattcagctgtcatgctggacactacttctgctatattaaggcgagc
aacggccagtggttccagatgaacgactcctccgtgtcggtcagtgacctccggtctgtc
ctcaaccagcaggcctacgtcctcttctacatcaagtccagtgatgggaagaaagccggt
gactacagccacatgagccataacccaagcatccccggtcagtcatctccacgaccggtg
gtgataccacgcatcaacaccaccgtccacccccacaacaacaacagtggcttcataggt
ccacagctgccaccacacatgaccaagcgcaatctccacgttaatgggaatggatctcta
cgggactatcccagcaactccaagcccagcaccagcagcagtgtggcggacaaacctagc
catggactggcctctgcctcttcctcttcgtccgtttcccactccatcagtcgacccacg
atgatcccagaccaggacaagcggcagaagctttccttcttcatcggacaaggcaaaccc
aaccgcccgtcctcctcctgctcttacagccagccgtcctctgccagcagctcctcctcg
tcctcctcctccagctcgttatcctcgtcacagtctacctcagacgttcgctttgttcca
cggcagcttaacctcggtaacggcatgtctcgcagtaacggggctcaccacgccggaggc
aatggagcgtcgttcttggtgccgtacggccaagagtcttcggaggagtcggaccaggag
aactgtggcactttggagaaaggctttctggccacgtctcactttaatgggaacaagaga
acgggagaagtctttgatcattcgactcaagccaccaacgggcagctgggagcgctccac
aacggtaacggaataaacagaccaaccaacggtctctctgcacccagtcagaacgggcac
cattacgaacaccacaaagtgaacggacacagcacccctgataaagtctctggcagtaat
catggaagttcatcctctgtggcgactgctgctgctaacggactcgacagtgaccacagt
ctcacaagcaaagaggcacccggctccgcctccccccaggccacttcctcccagagcatc
caccctgctgccggtgaaagccagacgctctccactcctgacacgagggctacgaatgtg
tccgagccgctccctccgcatacggcatcctccgccgtcggctctccgccctccgccgct
gcgacgaagaccacctctgtctcgtcgaaggaatccgcttcctcttccgctcggcatcgc
agccccaccgccttatccatcccgccgggccgctccccaaacaccaacggggcctccgca
gcgccagagaacgtcggcagaggcgtggaggaagcgagagatgcgccacagagcggcgag
ctgtcggcagagaccggaggacgcacagaggctccggagcaacaccagccgaagcccagt
tctagaggcaatgaagtccacacgcacccagacggggagcgagaccgactgcactctgac
tgcagcagagagcgagagcgacactacagggacaggagtcacgagcgggagagtgtgggt
gatcggcaccgtcacagacgggactccagagacgaccaccagcaccaccagcgcccgcac
aaggaccgctttccccccgccagtcactcctccagggactgggagcctgagcatcgctgg
gagcggacgacccaccaccctcgggagcgtgatcgcgacaggtgctcgaaccattaccac
cactaccacgaccgccgctacagagatgacagggacgagcggagggggggcggttacccc
tacggcgagaagtcccacggccgagagaggtggcggcaagacggtcgggaaccgcgggcg
ctgaaggacaagagcaacggccgggagagggattatcatccgtcgaaagaagatccctcc
tcgcccgccacggacacctccacgaagtccaagggctcgtcccctcgggcccgtctctcc
tcgttcgagtcggatcagaaccacaaaaggacgaacgatcctctgagcaaggagagggac
gacagctctgaggtccgccgctctcgaaaacacaaaaagagcaaaaagaagaagaagtca
aaggacaggcaccgggagagcggaagcgccgaagtggattcggacggagccaacgattca
aagaagaaaaagaggaggcagcggagccccggagcagcgaggagccacaagagcagcgag
gagaaggagagccgcaagcgtcgctacgacgacgacaaggaggagaaacgcgacggcgct
tcttcgtcgccggagaagcggcggcgctcggactacgccgacggcagcagagaacacctc
ctcccctccagccacacctcccccacacacgggtccacccaccaccatctcaacggatac
aaagggaacggttacggccacatcaatggtgactcccatggattctccagtggcttgaaa
cactga
DBGET
integrated database retrieval system
