Pseudoliparis swirei (Mariana hadal snailfish): 130204215
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Entry
130204215 CDS
T09868
Name
(RefSeq) cyclic nucleotide-gated channel cone photoreceptor subunit alpha-like
KO
K04950
cyclic nucleotide gated channel alpha 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130204215
Ion channels [BR:
pswi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
130204215
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Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
ENTR1
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
130204215
NCBI-ProteinID:
XP_056286736
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Position
14:11521839..11539597
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AA seq
605 aa
AA seq
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MHLGKSSVGPAKSGLSIQRAEDPSSRALAAGNRNNCNNKDGKEDGKTEEPKKDDKKDDKK
DDKKEEPKDVWIMDPATDTYYYWLGVISIPVFYNLMLLVARSCFNELQSGSLTMWLVLDY
TSDVLYFIDTFVRARTGFLEQGLLVRDPKVLKEKYMKTRQFRLDIISVIPTDIVFLKIGI
DNPEWRFNRLFRLARLFEFFDRTETRTNFPNIFRISNLVLYIIIIIHWNACLFFAISKVL
GFGSDTWVYPSVKNPEFARLARQYIYCFYWSTLTLTTIGETPPPVRDVEYFFVVVDFLTG
VLIFATIVGNVGAMISNMSAARVEFQAKVDSIKQYMQFRKVTKDLEVRVLKWFDYLWTEE
KTCDEKQVLKNLPDKLKAEIAINVHLETLKKVRIFQDCEAGLLIELVLKLQPQVFSPGDY
ICKKGDIGREMYIIKGGKLAVVADDGVTQFVVLSEGAYFGEISILGIKGSKAGNRRTANI
RSLGYSDLFALSKDDLMEALIEYPDAKSVLEEKGKSILMKDNLIDESLVVPTDAKDLENK
VNKVEASLEVMTVRFRKLTAQYETSQRKLKQRLSHMSNQVQTLRVEPVAPSLAGGPPPEH
SDVAH
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcacttggggaagagcagtgttggtcctgcaaagtccggcctcagcatccagcgggcc
gaggacccgagcagcagagcgctggctgctgggaaccggaacaactgcaacaacaaggac
ggtaaagaagatggcaagacggaggaacccaaaaaggacgacaagaaagacgacaagaag
gatgataagaaagaagaaccaaaggatgtgtggatcatggaccccgccaccgacacgtac
tactactggctgggcgtcatctccatccccgtgttctacaacctgatgctgctggtggcc
aggtcttgtttcaatgagctgcagtctggaagcctcacaatgtggctggtcctggactac
acctccgatgtcctctacttcattgacaccttcgtgagagcccggacggggtttctggag
cagggtcttcttgtacgggatccaaaggtcctgaaggaaaagtacatgaagacgcggcag
ttcagattagacatcatatcagtgattcccacagatatcgtattcctcaaaattggaatc
gacaacccagagtggaggttcaaccgcctcttccgattggcccgactctttgagttcttc
gaccggacggagaccagaaccaatttccccaacatcttccgaatttccaacctggtgctc
tacatcatcatcatcatccattggaacgcttgcctcttcttcgccatctccaaggtgctc
ggcttcggctcggacacctgggtgtatccgagcgtaaagaatccggagtttgctcgcctg
gcccggcagtacatctactgcttctactggtccaccctcaccctgaccaccatcggggag
acgcctcctccagtccgagacgtggaatacttttttgtagtagttgactttcttactggg
gttctcatctttgccacaattgtgggcaatgtgggcgccatgatatctaacatgagtgcc
gcacgagtcgagttccaggccaaggtcgactctataaagcaatacatgcagttccgtaag
gtcacgaaagatctggaggtgagagtgctgaagtggttcgactacctgtggacagaggag
aagacctgcgatgagaagcaggtgctgaagaacctgccggacaagctgaaggcagagata
gccatcaacgtgcatctggagacgttgaagaaagtgcggatctttcaagactgcgaggcc
ggtttgctcatcgagctggtccttaaacttcagcctcaagtcttcagcccgggagactac
atctgtaagaagggcgacatcggcagggagatgtacatcatcaagggagggaagctggcc
gtggtagcagatgatggggtcacgcagttcgtggtcctcagcgagggggcgtactttgga
gagatcagcatcctggggatcaagggcagcaaggcaggaaaccgaaggacggccaacatc
cggagcctgggctactccgatctgttcgccctgtccaaagacgacctgatggaggcgctc
atcgagtaccccgatgccaagagcgtgctggaggagaaggggaagtccatcctgatgaaa
gacaacctcatagacgagtctctggtcgtgcccaccgacgccaaagacttggagaacaag
gtcaacaaggtcgaagccagtttggaggtgatgacggtgagattcaggaagctgacagcc
cagtatgaaacctcccagcgtaaactgaaacagcggctcagtcacatgtccaaccaggtc
cagaccctccgagtcgagcctgtggcgccctctctggctggaggacctcctcctgaacac
tccgatgtggctcactag
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