Pseudoliparis swirei (Mariana hadal snailfish): 130204216
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Entry
130204216 CDS
T09868
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130204216 (ddx4)
Enzymes [BR:
pswi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130204216 (ddx4)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130204216 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
130204216
NCBI-ProteinID:
XP_056286737
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Position
14:11564373..11570635
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AA seq
604 aa
AA seq
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MLFFRHTRKLLEQWRLWRRQVWNNDGTAALEHLGGNDWNGSGGERGGFRGSGRSRGFGRQ
DRSDGDRDGAHENGFRGGRGGGGFRRGGDSGGSSGGGYRGKDEESFTHGEARDLEKEEAE
GERPRVTYVPPTLPEDEDSIFAHYEKGINFDKYDDIMVDVSGSNPPQAIMTFDEAGLCES
LRKNISKSGYVKPTPVQKHGIPIISASRDLMACAQTGSGKTAAFLLPILQQLMADGVAAS
SFSEQQEPEAIIVAPTRELINQIYLEARKFAFGTCVRPVVVYGGVSTSHQIRDIFRGCNV
LCGTPGRLLDVIGRGKIGLTKLRYLVLDEADRMLDMGFEPDMRRLVGSPGMPSKENRQTL
MFSATYPEDIQRMAADFLKTDYLFLAVGVVGGACSDVEQTFIQVTKFSKREQLLDILKTT
GTERTMVFVATKRQADFIATYLCQEKVLTTSIHGDREQREREQALADFRFGKCPVLVATS
VAARGLDIPDVQHVVNFDLPNNIDEYVHRIGRTGRCGNTGKAVSFYDPDADCQLARSLVT
VLSKAQQEVPSWLEESAFSSGGAAGFNPSRKSFASTDSRKGGSFQEQDLRSQPAAAAPEE
EEWE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgctcttctttaggcacacaaggaagctcctggaacagtggcggctttggaggaggcaa
gtctggaacaacgacggcaccgccgccctggagcaccttggcggaaacgactggaacggt
tctggaggagaacggggcggtttcagaggcagcgggcgcagccgaggatttggcagacag
gaccgcagcgatggagacagggatggagctcatgaaaatggcttcaggggaggaagagga
ggaggagggttcagacgaggtggggacagcggaggaagctctggaggaggctaccggggg
aaagacgaggagagcttcactcatggagaagctagagatctggaaaaggaggaagcggag
ggagaaagaccacgggtcacgtatgttcccccaacactccctgaggacgaagactccatc
ttcgcccactatgagaaaggcatcaactttgacaagtacgatgacatcatggtggacgtc
agtggaagcaacccaccgcaggccatcatgacctttgatgaggcgggattgtgcgagtcc
ctgaggaaaaacatcagcaagtctggttacgtgaagccgacgcctgtgcagaagcacggc
atccccatcatctctgcttccagggacctcatggcctgcgcccagacggggtccggcaaa
acggctgccttcctgctccccatcctgcagcagctcatggccgacggcgtggcagccagt
tccttcagtgagcagcaggagcccgaagccatcatcgtggccccgaccagggagctcatc
aaccagatctacctggaggccaggaagtttgcctttgggacctgtgtgcgtccggtggtg
gtctacggtggagtcagcacgtcacaccagatcagagacatcttcaggggctgcaacgtg
ctgtgtggaaccccagggaggctgctggacgtgattggaagaggaaagatcggcttgacg
aagctcaggtacctggtgctggacgaggccgaccgcatgctggacatgggctttgagccc
gacatgcgccgcctggtgggctccccggggatgccatccaaagagaaccgtcagactctg
atgttcagcgccacctacccggaggacatccagaggatggcggctgacttcctcaagacg
gactacttgttcctggctgtgggcgtggtgggcggagcctgcagcgacgtggagcagacc
tttatccaggtcaccaagttctccaagagggagcagctcctggacatcctgaagaccaca
gggacggagcgcaccatggtgttcgtagcgaccaagaggcaggccgacttcatcgccacc
tacctgtgccaggagaaggttctgaccaccagcatccatggtgaccgggagcagcgggag
cgagagcaggctctggcagacttccgctttggcaagtgtccggtgctggtggccacgtcg
gtggccgcccggggtctggacatcccagacgtccagcacgtggtgaactttgacctcccc
aacaacatcgacgagtacgtccaccgcatcgggaggaccggccgctgtggcaacaccggg
aaggccgtgtccttctacgaccccgacgccgactgccagctggcccgctccctggtcacg
gtgctgtccaaggcgcagcaggaagtgccctcgtggttggaggagtcggccttcagcagc
ggtggagctgcaggattcaacccctccaggaagagcttcgcctccaccgactccaggaag
ggcgggtctttccaggagcaggacctgaggagccagcctgctgctgctgctccagaggag
gaggagtgggagtag
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