Pseudoliparis swirei (Mariana hadal snailfish): 130204218
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Entry
130204218 CDS
T09868
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00100
Steroid biosynthesis
pswi01100
Metabolic pathways
Module
pswi_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
130204218 (lss)
Enzymes [BR:
pswi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
130204218 (lss)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
DUF7374
Motif
Other DBs
NCBI-GeneID:
130204218
NCBI-ProteinID:
XP_056286742
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All DBs
Position
2:4954558..4966870
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AA seq
735 aa
AA seq
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MTEGTHLRRRGGPYKTEAATDLSRWRLSNVEGRQNWCYVEDQDPPDREQTMLEAHSLGLD
TSTFVSVSEAAHTAVDAAVKGMSFYSRLQAEDGHWAGDYGGPLFLLPGLLITCHVAKIPL
PEAWRKEMVRYLRSVQLPDGGWGLHIEDKSTVMGTALSYIALRILGLEPDHPDVERARNN
LHDKGGAVGIPSWGKFWLAILNVYSWEGMNTLLPEMWLFPTWMPAHPSTLWCHCRQVYLP
MSYCYAVRLAAQEDPLVLSLRQELYVQDYATIDWPAQRNNVAACDLYTPHSTLLTVAYTV
LNAYEAHHSAALRGKAVKELYEHIQADDRFTKCISIGPISKTINMLVRWYVDGPASPVFQ
EHVSRIPDYLWLGLDGMKMQGTNGSQLWDTCFAVQAFLEAGAQDDSGLAECLRHAHQFLT
ITQIPENVPEYQKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQELCPSIGKHVT
SERLHDAVNVLLSMRNSDGGFATYETKRGGRLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALKHFQKAHPEHRAEEISCTLRDGLEHCRKVQRPDGSWEGSWGVCFTYGIWFGLEAFACM
GHAYHDGAVCVEVQRACRFLLDRQMADGGWGEDFESCEQRRYVQSGNSQIHNTCWSLLGL
MAVRHPDRRAMERGVQLLIDSQLPNGDWPQENISGVFNKSCAISYTSYRNVFTVWTLGRF
SALYPDSPLAGKLKL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgactgagggaacgcacctgcggaggcgaggggggccgtacaagaccgaggccgccaca
gacctgagccgctggaggctgagtaacgtggagggcaggcagaactggtgctatgttgaa
gaccaggacccccccgacagggagcagaccatgctggaagcccattcactgggcttggac
acgagtacgtttgtgtctgtctctgaagccgcccacacggctgtggatgcagcggtgaaa
ggcatgagcttctacagccgcctgcaggccgaggacggccactgggcgggggactacggc
ggacctctcttcctgctcccgggcctcctgatcacatgccacgtggctaagatcccgctg
cccgaggcctggaggaaggagatggtgaggtacctgcgctccgtgcagctgccggatgga
ggctggggcctacacattgaagacaagtcgaccgtcatgggcacagcgctgagctacatc
gccttgaggatcctgggactcgagcccgaccaccccgacgtggagcgagccaggaacaac
ctgcacgacaaaggaggagccgtggggattccctcgtggggcaaattctggttggccatc
ttaaacgtctacagctgggagggaatgaacacattgctgccagagatgtggctgtttccc
acgtggatgccggcccacccctccaccctgtggtgtcactgccgccaggtgtacctcccc
atgagctactgttacgccgtcagactggcggcacaggaagaccccctggtcctcagcctc
agacaggagctgtatgtccaggactacgccaccattgactggccagctcagaggaacaat
gtggcggcgtgtgatctgtacacacctcacagcacgctgctcaccgtcgcctacacggtg
ttgaacgcttacgaagcccaccacagcgccgcgctgagaggaaaggccgtcaaagagctg
tacgaacacatccaggccgacgaccgcttcaccaaatgcatcagcatcggaccgatctca
aagaccatcaacatgctggtccgctggtatgtggatggccccgcctctccggtcttccag
gagcacgtgtccaggatcccggactacctctggttgggattagacggcatgaagatgcag
gggaccaacggctctcagctctgggacacttgttttgctgtacaggctttccttgaggcc
ggagcccaagacgactccggactggccgagtgcctccgacatgcccatcagttcctcacc
atcacacagatacctgagaatgttcctgagtaccagaagtactacaggcagatgaacaag
ggaggcttccccttcagtacccgcgactgtggctggatcgtggccgactgcacggcggag
ggcctgaagtccgtgatgctgctgcaggagctttgtccctccatcggcaagcacgtcacc
tccgagcggctgcacgacgccgtcaacgtgttgctcagcatgagaaattctgacggtgga
ttcgcgacgtatgaaacgaagagaggagggcgcctcctggagctgctcaacccatctgag
gtgtttggtgacatcatgatagattacacctatgtggagtgtacctcagcagtaatgcag
gctctgaaacacttccagaaggcacaccctgaacaccgtgctgaggagataagctgcact
ctgagagacggactggagcactgcaggaaggtgcagaggcctgacggatcctgggaaggg
tcctggggagtgtgcttcacgtatgggatctggtttggcctggaagccttcgcctgtatg
ggccacgcctaccacgacggggccgtgtgcgtcgaggtccagcgggcctgccgcttcctg
ctggaccggcagatggcggacggcggctggggggaggactttgagtcgtgcgagcagcgg
cgctacgtccagagcggcaactctcagatccacaacacctgctggtccttgttagggctc
atggccgtcaggcatcctgacaggcgggccatggagagaggggtgcagctgctgatcgac
agccagctgcccaacggagactggcctcaggagaatatttcgggcgtgttcaacaagagc
tgcgccatcagctacacctcctacaggaacgtgttcacggtgtggacgctcggacgcttc
tccgccctttaccccgacagcccgctggccgggaagctcaagctgtga
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