Pseudoliparis swirei (Mariana hadal snailfish): 130204224
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Entry
130204224 CDS
T09868
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130204224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130204224
Membrane trafficking [BR:
pswi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
130204224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
CCDC113_CCDC96_CC
ATG17_like
FidL_like
Motif
Other DBs
NCBI-GeneID:
130204224
NCBI-ProteinID:
XP_056286756
LinkDB
All DBs
Position
2:14522746..14542446
Genome browser
AA seq
1652 aa
AA seq
DB search
MEDPGGTGAASGAPSPAGAAKSKLDTLSKDDLIKFAKKQMAVMQKMKGRCADLEREVESV
KEQYKNNNNSSEDSTLIQELTERMDALLLEKAETQQSLFLSRKDLEKAKQQAKGDLLMLQ
GELDRVREDHQREFKSLESRIEESNSKHQEEVACFQKILKEREEDDRESERERERAKVST
EEVRLCLESQLETLRAELEATHKLKAQGIGELQESHQRELTETQQEVENLKEELAQKTLQ
HEDEMRALEEDCEIERERLLLLHEELTEQLALKDSYLQDVQEEDEDPARGSGIAKMLELS
ACSQGDSSHGDGDETETGRLRAALDELQSQSTMLQDELTLLSNVKSELEAELEKAKDEFQ
MEKEELEFKINELQMNRESAPSDPSVTRDPDQQEVSGDFQQQSEAHKDGSESAISPVDQN
PLDPEGLRAQCDALTRERDSAVNECQHMRDILQGVETELGEKTTDFLFQYKAMKEQGVNT
VRELQEQMEQLSQERDELLVRVADGTEEQNTLMKNLQDLRLKLEGFADGDQKLQSSVEEQ
TRLACELKQSVEELTRQNVEILSQLQLKEHMTQELREMVNALTAERDEIQAQLQHREEEM
QKQNNDRTKEIDGMLQEKENEALLHREENEKDLKSLKREREKMEESLKEEVERRQETVSA
FELTIKELSTEKADLQRELEEASSGLSEAWETRELLGSKLASLEAQLEQETSEKNRLEAK
LSSLAQEADQARPPSTALEENHSEVLKISTEEVEELRARVDELQREGGLLRSSLEEARGA
MGLEEVVKDLQARIADLEQERSMLRNNLEEVVKDTEGLQNDLEEMKSFNEKFNEENQRLQ
AHISELTQEREEKEEEELERGMEKESKELKDQLTEKDSLVSQLRSEIAALQESAAQAASS
EENAASEITKKIALLEKEHKEKDGKMNKIKAVAIKAKKELETRKKEVALLKKGVESLKAE
REKVSSSMKDIIHGAEGYRHLQIDYDRQTEQLDEEREKVEEAERRMAELTKRLSSAVTQT
ETLSSEKENLLACMETTRSTVRQLEAQNQELQRQSTSLDRDLLTERAMKEQKMKDLSSAT
KEVEELTAQLRKQQQQSQQTAQELGQLRKGAQQSSLLDMEMADYERLVKELNVKLLERDE
CAEKLKAQINTLTQKEDSLKQEIEALKSQLDQGEEKTFQMKQLLVKTKKDLADAKMQESS
LMMLQASLKGELEANQQQLENTKIEMCELTGERHRLQEQQRSALEQQQRTNSSLQLRINI
LQQERDAAKTELMSTTGEFDGYKVRVHNVLKQQKSKTAAQSEGDSGKLEREQLSSRVEQL
RSRLAESQQSLQSSTAELQQLQTEHDTLMERHNKILQDAVSKEAELRERLLSVQSENVAL
RSDVSQAQSDLSSQVEAQRHTYREQLRKLQDDHGATVETLQGQLTRVEEQLFYLQSQNSS
VAIQSGRKSLTSDPQRRNMDQNQAGLGMMILSDPRSMAREEGEGMETTETESPSSALSPL
PSLEQLLASPDPKQEPFVWTVEPTKEELSVKLSTATRGMDHMNSLLHETEATNAVLMEQI
TLLKSEVRRLERNQEREKSVANLEYLKNVLLQFIFLQSGSERQTLLPVIHTMLQLSPEEK
SKLAAIAHGQEEGSGSRGSGWSSYLHSWSGIR
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccctggtgggactggagcagcatctggggctccatccccagcaggtgcagcc
aagtcaaagctggacacgctgtccaaagatgaccttatcaagtttgcaaagaagcagatg
gctgtcatgcaaaagatgaagggcagatgtgcagatttggaaagagaagttgaatccgtc
aaagagcaatataaaaacaataacaatagttcagaggactctactctgatacaggagcta
actgagaggatggatgccttactactggagaaggcagaaactcagcaaagtctttttcta
tctcgtaaagatctagagaaggctaagcagcaagccaagggtgatctgttgatgctgcaa
ggagagcttgaccgtgtaagagaagatcaccaaagagagttcaagagcctagagagcaga
atcgaggaatccaacagcaaacaccaagaggaagtggcttgtttccagaaaatactgaaa
gagcgggaagaagatgacagggagagtgaaagagaaagagagagggccaaagtgagcact
gaagaggtccgcctttgcttagaatctcagctggaaactcttcgagctgaactagaagcg
acccacaagctaaaagcccaggggatcggtgagctgcaggagagccaccaaagggagttg
acggagactcagcaggaggtggagaacctgaaggaggagctggctcagaagactctgcag
catgaagacgagatgagggctctggaggaggactgtgaaatcgagagggagcgtctcctg
ctgctccacgaggagctgaccgagcagctcgctctcaaagacagctacctgcaggatgtg
caggaggaagacgaggacccggcccgtggttcagggattgccaaaatgctggagctgtct
gcctgcagccagggtgactccagccatggcgatggggacgagacagagactggaagactg
agagcagccttggatgaacttcaatcccagagcaccatgttacaggacgagctcaccctg
ctcagtaatgtaaagagtgaactggaggcagaactggaaaaggcaaaggatgagtttcag
atggagaaagaagagctggagttcaaaatcaatgaattgcagatgaaccgggaaagtgct
ccaagtgacccatcagtaacccgggaccctgaccaacaggaagtctcaggagactttcag
cagcagagtgaagcacacaaagatggaagtgaatcagcaatcagtcctgtggaccaaaac
cctttggatccagaggggttgagggcccagtgtgacgccttgaccagagaaagagactct
gctgtgaacgagtgtcaacacatgcgagacatactgcaaggcgtggagactgaactgggt
gagaagacgacagattttctctttcagtacaaagccatgaaggagcaaggggtaaatact
gtacgggaactccaagaacagatggaacaactcagtcaggagagggatgaactgttggtg
agggtggcagacggtacagaggagcaaaacactctgatgaagaacctacaagacctgagg
ctgaagcttgaaggtttcgccgatggggaccagaaactccagtcgtctgtagaggaacaa
acacgtttagcctgtgagctgaagcaatctgtggaggaactgacgaggcagaacgtggag
atcctctcccaactgcaactgaaggaacacatgactcaagaactgagagagatggtcaac
gcgctgactgcagagcgagatgaaatacaggcccagcttcagcaccgggaagaggaaatg
caaaagcagaacaacgatagaacaaaagaaatcgatgggatgcttcaggagaaagagaac
gaggcacttttgcacagagaggagaacgagaaggatttgaaaagcctgaaaagggagagg
gaaaagatggaggagagcctgaaagaggaggtggaaagacgacaggagacagtttctgct
ttcgagctgaccatcaaagagctctccacagagaaggctgacctccaacgagaattggaa
gaagcatcttctgggctttccgaagcatgggaaacgagggagcttttgggctccaagctg
gcatccctggaggctcagctagagcaggagacgtctgaaaagaatcgcctagaggcaaag
ttgagttcactggcacaggaggcagatcaggcccgcccccccagcacagccctggaggaa
aatcattctgaagtgctcaaaatctccacagaggaagttgaggagctccgagcacgcgtg
gatgagctgcaaagggaaggggggctgttgaggagtagtcttgaggaggctcgaggcgca
atgggattagaggaggtggtgaaggatctccaggctcgtatcgcagacctggaacaggag
aggagcatgttgaggaacaacctggaggaggtggtgaaggatacggaagggctgcaaaac
gacctggaggaaatgaagtcattcaacgagaagtttaatgaggagaaccagagactgcag
gctcacatttctgagctgactcaagagagggaagaaaaggaggaagaggaactggagaga
gggatggagaaagagagtaaagagctcaaagatcaactgacggagaaagattcactcgtg
tctcagttgaggagtgaaattgctgctctccaggagtcggctgctcaggctgcttcctct
gaggaaaatgcagccagtgagatcacaaagaaaatagctctcctggagaaagaacacaaa
gaaaaagatgggaagatgaacaaaatcaaggcagttgccattaaagcaaagaaggagctg
gagaccaggaagaaagaggttgcgttactcaagaagggagtagaatccctgaaggcagag
agggagaaagtgagcagctctatgaaggatatcatccatggtgctgaaggctacaggcat
ctgcagatagattacgacaggcagacggagcaactggatgaggagagggaaaaggtggag
gaggcggagagacggatggctgagctgaccaaacgactcagcagtgctgtcacacagaca
gagacactcagcagtgagaaggagaacctgctggcctgtatggagacgacaaggagcaca
gtgaggcagctggaagctcaaaaccaggagctgcaaagacagtcaaccagtctggaccgg
gacctgctgactgagagagcaatgaaagaacagaagatgaaggacttgtcatctgcaacg
aaggaggttgaagagctgacagcacagctccgcaaacagcagcaacagtctcagcagact
gcccaggagctggggcagctacgcaagggggcgcagcagagctctctgctggacatggag
atggccgactatgaacgcctggtgaaagaactcaatgtcaaactcttagagagagatgag
tgtgctgagaagttaaaggcccagataaacaccttgacccagaaggaggactcactcaaa
caggaaattgaggctttgaagtcccagctggaccagggggaggagaaaaccttccagatg
aaacagctgctggtgaagaccaagaaggacttggctgatgccaagatgcaggaaagctcc
ctcatgatgctgcaggcctctctgaaaggagaactggaggctaatcaacagcagctggaa
aacaccaagatcgagatgtgcgagctcacgggcgagcgacaccgtctgcaggagcagcag
aggtctgcgttggaacagcaacagagaaccaacagctccttgcagctgcgcatcaacatt
ctgcagcaggagagagatgctgctaagacagagctcatgtcaacaactggcgagtttgac
ggttataaggtgcgagtccacaatgtgctcaaacagcagaagagtaaaaccgctgcccag
agtgaaggagactctggcaaattagagagggagcagttgtcctcgcgagtagagcagctg
aggtccaggctggcagagagtcagcagagcctccagagcagcacagcagagctgcagcag
ctccagaccgaacacgacactctgatggagagacacaacaagatcctccaggacgccgtc
agcaaggaggccgagctccgtgagagactgctgtcagtgcagtcggagaacgtggctctg
aggtcggatgtgtcccaggctcagtcggacctgtcttcccaggtggaggcccagcgccac
acctacagggagcagctcaggaagctgcaggatgaccacggggccaccgtggagaccctg
cagggccagctgacccgtgtcgaggagcaactcttctacttgcagagccagaacagttca
gtggcgatccagtccggccggaagtccctgacctcagacccccagcgtagaaacatggat
cagaaccaggcgggtctgggaatgatgatcctcagtgacccccgttctatggccagagag
gagggcgagggaatggagaccactgagactgagagcccgtcctctgctctttcgccgctg
ccctctctggagcagcttctcgcgtccccggaccccaaacaagagcctttcgtgtggacg
gtggagcccaccaaagaagagctcagtgtcaagctgagcacagccacgcgcggcatggat
catatgaacagcctcctgcatgaaaccgaggccaccaacgctgttctcatggagcagatc
accttgctgaagagtgaagtacgtcgtctagaacgaaaccaggagagggagaagagtgtg
gccaacctggagtatctgaagaacgtcttgctgcagttcatcttcctgcaatctggcagc
gagaggcagacacttctgcccgtcattcacacaatgctgcagctcagtccagaggagaaa
agcaaactggctgctattgcacatggtcaggaagaggggtccggttctcggggttcaggc
tggagctcctatcttcatagctggtctgggatcagatag
DBGET
integrated database retrieval system
