KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130204241
Entry
130204241         CDS       T09868                                 
Name
(RefSeq) histone deacetylase 4-like isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    130204241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pswi03036]
    130204241
Enzymes [BR:pswi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     130204241
Chromosome and associated proteins [BR:pswi03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     130204241
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln I-HmuI_NUMOD-like
Other DBs
NCBI-GeneID: 130204241
NCBI-ProteinID: XP_056286772
LinkDB
Position
14:complement(9087679..9133792)
AA seq 1091 aa
MTSHSHQEGILGKEQPLEVLKTSALNHIPTVDINSALPLRLPPAAIPMDLRVDHHHHQQQ
QQQQPVSSLSPSGQQSPGPGLLGGSCPAGGGVREQQLQQELLTLKQKQQIQRQILIAEFQ
RQHEQLSRQHEVQIQEHITQQQELLALKHQQELLEHQRKMENHRLEQELEKQQREQKLLL
LKNKERGQESAVASTEVKMRLQEFVLNKKKALAQRSLNQGGLHNDAPYWYRKTQHSSLDQ
PPQTGLSTYNHPVLGVYNPRDDFPLRKTASEPNLKLRSRLKQKVSERRSSPLLRRRDSPI
TTAKKRSLDMADSACSSAPGSGPSSPNNSSINIPNENGITVSVSNTEASLAQRLCSGAER
GSVNQLSLYTSPSLPNITLGLPATATAASNVTSAQQDGSLQPALSLSPPFLSGGHLTAYL
AEAVAGTGGHGAHSPLLQHMVLMEQSPAQSPLVTGVSGLSMLPAASMAKLQRQHRPLGRT
QSAPLPQGSAAQAHAQALALQQLVVQQQHQQFLEKHKQHFQQQQLHLNKMMTKPSESPVG
RQHQSHPEETEEELREHQDGGALPPGVTIKQEPPDPQELQEEALLQQHRERLAEQELLFR
QQALLLEQQRIHQLRNYQASMEAAGLSISFPGHRPLSRAQSSPASASFPISVPAIEPPVK
PRFTTGLVYDSLMQKHQCMCGNTNSHPEHAGRIQSIWSRLQETGLRAHCECIRGRKATLE
ELQTVHSEAHVLLYGTNPLRQKLDCSVTPVFVRLPCGGVGVDSDTIWNEVHSSSAARLAV
GSVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLSITKIL
IVDWDVHHGNGTQQAFYDDPNVLYLSIHRYDDGNFFPGSGAPDEVGSGPGVGFTVNVAFT
GGLDPPMGDVEYLAAFRSVVMPIANEFAPDIVLVSSGFDAVEGHPPPLGGYTLTSKCFGY
LTKQLMTLAGSRVVLALEGGHDLTAICDASEACVAALLGQELDPLPKSVLEQRPNPNAVR
SLEKVLETHSKYWCSVNRCSALLGLSLLEAKRGDSEEAEAVSAMASLSVANSNAMALSRP
EEEPMEEEEPL
NT seq 3276 nt   +upstreamnt  +downstreamnt
atgacatcacacagccaccaagaggggatcctggggaaggagcagccgctggaggttctg
aagacgtcggcgctcaaccacatcccaacagtggacatcaactcggcgctgcccctgcgt
ctccctccggccgccatccccatggacctgcgcgtggaccaccaccaccaccagcagcag
cagcagcagcagccggtgtcctcgctctccccgtccggtcagcagtcgcccggcccgggg
ttgctggggggctcgtgcccggccggcgggggcgtgcgcgagcagcagctgcagcaggag
ctgctgaccctgaagcagaagcagcagatccagaggcagatcctcatcgccgagttccag
cggcagcacgaacagctctcccgccagcacgaggtccagatccaggaacacatcacgcag
caacaagagcttctggccttgaagcaccagcaggagctgctggagcatcagaggaagatg
gagaaccaccgtctggagcaggagctggagaagcagcagagggagcagaagctgctgctg
ctgaagaacaaggagagaggacaggagagcgccgtggcgagcaccgaggtgaagatgcgg
ctgcaggagttcgtcctgaacaagaagaaggccctggcccagcgcagcctcaaccaggga
ggcctccacaacgacgctccctactggtaccgaaaaacacagcacagctctctggaccag
ccaccacagactggtttgtccacctacaaccaccctgtgctgggtgtctacaacccccgg
gatgacttcccactgcgaaagactgcctcggagcccaacctgaagctgcgctcgcggctg
aagcagaaggtgagcgagcggaggagcagtccgctgctgcggcgccgggacagccccatc
accaccgccaagaagcgctcgctcgacatggccgactctgcgtgtagcagcgcccccggc
tcgggcccaagctccccgaataacagctccatcaacattcccaatgagaacggcatcacc
gtgtcagtctccaacacggaggcgtctctggcccagaggctgtgcagcggcgccgagcgg
ggctccgttaaccagctgtccctgtacacttcgccatccttgccaaacatcaccctgggg
ctgcccgccaccgccaccgctgcttccaacgtgacctcggcgcagcaggatggaagtctg
cagccggccctctccctcagccctcccttcctctccggcggccacttgaccgcctacctg
gccgaggctgtagccggaacgggcgggcacggcgcccacagtccactgcttcaacacatg
gtgctcatggagcagagcccggcacagagccccctggtgacaggtgtgagcggcctgtcg
atgttgccggcggcgtccatggccaagctgcagcggcagcaccggcccctggggcggacc
cagtcggcccccttgccccaggggagcgccgcgcaggctcacgcccaggccctggccctg
cagcagctggtggtccagcagcagcaccagcagtttttggagaagcacaagcagcatttc
cagcagcagcagctccacctcaacaagatgatgaccaagcccagcgagtcgcccgtgggc
cgccagcaccagagccacccggaggagacggaggaggagctgagggagcaccaggacgga
ggggctctgccgccgggggtcaccatcaagcaggagccccccgacccgcaggagctgcag
gaggaggcgctgctgcagcagcacagggagaggctggccgagcaggagctgctcttcaga
cagcaggccctgttgttggagcagcagcggattcatcagctgagaaactatcaggcctcc
atggaggcggccggcctgtccatctccttcccgggacaccgccccctgtccagggcccag
tcgtctccggcctcggcctccttcccgatcagcgtcccggccatcgagccgcccgtcaaa
ccccgcttcaccacaggcctggtgtacgactctctaatgcagaagcaccagtgtatgtgt
ggaaacaccaacagccacccggagcacgcgggccggattcagagcatctggtcccggctg
caggagaccggactgcgagcgcactgtgagtgtatccgtgggcggaaagccactctggaa
gagctgcagacggttcactctgaagcccacgtcctgctgtacgggaccaacccactccgc
cagaaacttgattgttcagtcactcccgtgttcgttcgtctcccgtgtggaggggtgggg
gtggacagcgataccatttggaacgaggtgcactcctccagcgcggcgcggctcgccgtc
ggctccgtggtggaactggttttcaaagtggccaccggagagctgaagaacggtttcgcc
gtggtccgcccccccggccaccacgccgaggagagcactcccatgggcttctgctacttc
aactctgtggccatcgcagccaagctgctgcagcagagactcagcatcaccaagatcctc
atcgtggactgggacgttcaccacggcaacggcacccagcaagcgttctacgatgacccc
aacgtcctctacctgtccattcatcgctacgacgacggcaacttcttccctggaagcgga
gcgcctgacgaggtgggcagcgggcccggagtcgggttcaccgtcaacgtcgccttcacc
ggaggcctcgatccacccatgggagacgtggagtacctggcagccttcaggtccgtggtg
atgcccatcgccaacgagtttgccccggacattgtgctggtctcctctggcttcgacgct
gtggagggacaccctcccccactgggcggctacactttgacgtctaaatgttttggctat
ctgaccaagcagctgatgaccctcgccggaagccgggtggtcctggctctggaggggggt
cacgacctcaccgccatctgcgacgcctccgaggcctgcgtggccgcgctgctcggccag
gagctggacccgctgccgaagtccgtcctggagcagaggcccaaccccaacgctgtccgc
tctctggagaaggttctggagactcacagtaagtactggtgctcggtgaatcgctgctcg
gcgctgctggggctttctctgctggaggccaaacgaggagactcggaggaggccgaagcc
gtcagcgccatggcctccctgtctgtggccaacagcaacgccatggctctaagcaggcca
gaggaggaacccatggaagaggaggaaccgctgtaa

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