Pseudoliparis swirei (Mariana hadal snailfish): 130204286
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Entry
130204286 CDS
T09868
Name
(RefSeq) LOW QUALITY PROTEIN: CLIP-associating protein 1-like
KO
K16578
CLIP-associating protein 1/2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130204286
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130204286
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
130204286
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
130204286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
Sec7-like_HUS
TOR1L1_N
Cnd1
HEAT_2
MMS19_N
HEAT_DAAF5
ParcG
Motif
Other DBs
NCBI-GeneID:
130204286
NCBI-ProteinID:
XP_056286860
LinkDB
All DBs
Position
14:complement(1192261..1218641)
Genome browser
AA seq
1525 aa
AA seq
DB search
MERLLELVLQKDLGSRLQVGQQVTELVLDEGQTPDMEQDQTLLDRMVDAVASSWVNSSNY
KVVLLGMDILSALVSRLQDRFRTQVGTVLPSLIDRLGDSKDPVRDQDQALLLKVMDQAAN
PQFVWDRMMGGFKHKNNRTREGLCVCLVSTLNVFGSQSLTLSRIVPHICHLLGDPASQVR
DGAMSCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSRFDEVQRSGAMVLSPLPDKNLED
DDSGGRSSSSSSRGKKAVSMGSARRPAPLPGARSAGRDAAGAVEQEDFAQGFQDVPLLQI
SSNREVEEAMARIRDVLSDDKRDWELRVAALKKVRSLLLAGAADFDGFPQQLRLTEAALK
LSAKDLRSQVVREACLTLGHLSAVLGGHFDHAAETVMPTLLSLLANSAKVMASSGTSAIR
LILKQTHSPRLVPIITSSCSSKSVAVRRRCFEFLELLLQDWQSSCLERHAAVLTETIKKG
VHDADAEARSVARKCYWTFHVHFRREAELLFQGLEPSYQKALQAHLRSGDASSSSSQESN
XTPPLHSRHHLVCNSSGGGGGAKPPPSSSPGPLQRSRSDVDVSAASSARCRMPAAPSAPQ
APGSPRSAFSSAFSSASALPPGSYASLGRVRTRRTSSGTDPLPSDSRGRSQRKVASHSQR
ERLAKTTSXTGSRSGSPGRLLGSAYGRTPRPGVGAARGDQSRPRGHRSQGCSRETSPSRA
AAARSRIPRPSMSQGCSRETSRESSRDTSPARGFSPLDRRSQQARISASVNAMKVLNPGT
DAEAAVADALLLGDSRSKRRPARRRFDSPGVHSDDEATSDPSGVGSERSHGSRNGGAAPG
YLDVAEVLNHCASTNWTERKEGLLGLQGLLRGHRALSRVELKRLCEIFTRMFADPHSKRV
FSMFLETLVDFVSLHREELLDWLFVLLTQLLKKMGAELLGSVQAKVQRALDVTRESFPSQ
LQFTILMRFIVDQTQTPNLKVKAATLRYIAALARQMDPADFVNSSETRLAVSRVITWTTE
PKSADVRKTLHSWAGEDVSGRPTGDNLEERCKQAAQVVLICLFELNTPEFTMLLGALPKT
FQDGTTKLLHSHLRTASMNMAPSARTSRTSSLRSPLPPPPSCSQGGLPPSRLWSADGLSK
FPIPPFPSPLPPPTVVRSAYSPSTLDNDSENLKSEEISSSLRGVTEAIQTSSCHSQEEVK
REPAFGASWDSGVAVGARPALLNTPPPRSFAAPRFRDYNPYNYTDALEQEALKEAQLDDD
EETPRDGGQQDNRSPRSFPASPSEQLALVGDLLKEVSQGQAGGRGPEERRGTLLELLKAA
REDSLVVWEEHFKTTLLLLLETLGDQDHTIRALALRVLKEVLRTQPGRFKNYAELTVMKT
LEAHKDSHKEVVRAAEEAASTLATSVQPEQVIKVLSPIVQTADYPVNLAAIKMQTRAIER
TAKEALHLLLPDLVPGLLQGYDNTESSVRKASVFCLVAVYSVMGEELKPYLAQLTGSKMK
LLNLYIKRAQTSTSTSSSSSDISSY
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcctgctggagctcgtgctgcagaaggacctggggagccggctccaggtgggc
cagcaggtcacggagctggtcctggacgagggccagacccccgacatggagcaggaccag
accctgctggaccggatggtggacgcggtggccagctcctgggtcaactccagcaactac
aaggtggtcctgctggggatggacatcctgtccgcgctggtcagcaggctgcaggacaga
ttcaggacgcaggtgggcacagtcttgccgagcctcatcgatcgtctgggagactccaag
gacccggtccgggaccaggaccaggccctgctgctgaaggtcatggaccaggccgccaac
ccccagtttgtgtgggatcgcatgatgggaggcttcaaacacaagaacaaccggaccagg
gagggactctgcgtctgcctcgtctccaccctcaacgtcttcggctctcagagtctcacc
ctcagcaggatcgtgcctcacatctgtcacctgctgggagaccccgccagccaggtgcgt
gacggagccatgagctgcctggtggagatctaccgccacgtgggcgagcgcgtgaggatg
gatttggggaagaagggtcttcctcagtcccggctcaacgtcatcttcagccggttcgac
gaggtccagaggtcgggggccatggtcctgtccccgctgcccgacaagaacctggaggac
gacgactccggcggccgctcctcctcgtcctcctccagagggaagaaggcggtgagcatg
gggtcggcccgacgccccgcccccttgccaggcgccaggtctgcaggccgcgacgccgcc
ggagccgtggagcaggaggacttcgcccagggcttccaggacgtccccctgctgcagatc
tcctccaacagggaggtggaggaggccatggcgaggatccgggacgtgctgtcggacgac
aagcgggactgggagctccgggtggcggcgctgaagaaggtgcgctcgctgctcctcgcc
ggcgccgccgacttcgacggcttcccgcagcagctgcgtctcacggaggcggcgctcaag
ctgtcggccaaagacctccggtctcaggtggtgagggaggcctgtctcaccctcggacac
ctgtcggcggtgctcggcggacacttcgaccacgcggcggagaccgtgatgccgacgctc
ctcagcctcctggccaacagcgccaaagtgatggcctcctccggcacctcggccatccgc
ctcatcctgaagcaaacccactccccgcgtctcgtccccatcatcaccagcagctgcagc
tccaagtctgtggcggtccggaggcgctgcttcgagttcttggagctgctgctgcaggac
tggcagagcagctgcctggagaggcatgcagccgtcctaacggagaccataaagaagggc
gtccacgacgccgacgccgaggctcgctccgtggccagaaagtgttactggaccttccac
gtccacttccggcgggaggcggagcttctgttccagggcctggagccctcctatcagaag
gctctgcaggctcacctgaggagcggcgacgcctcctcctcttcctcccaggagagcaac
tgaactcctcctcttcatagccgccaccaccttgtgtgtaactcctccggaggaggagga
ggagccaagccccccccctcctcctccccaggccccctccagcgttcccgtagcgacgtg
gacgtcagcgcggcgtcctccgcccgctgccggatgccggcggcgccctccgccccgcag
gcgcccggctcgccccgctcggccttcagctcggccttcagctcggcctcggccctcccg
cccggctcctacgcctcgctgggtcgagttcgaaccagaagaacgagttccggaaccgac
ccgttgcctagcgacagccgggggaggagccaaaggaaagtggcgtcgcattctcaacgt
gagcgtttggccaaaactacgtcatgaaccggcagccgctccggttctcccggccgcctg
ctaggctccgcctacggccggaccccgaggccgggcgtcggcgccgcccgcggcgaccag
agccgaccccgaggtcaccgcagccaaggctgcagccgggagaccagcccctccagggcg
gccgcggcccggagccggatcccccggcccagcatgagtcagggctgcagccgcgagacg
agtcgtgagagcagccgtgacaccagcccggcccgcggcttctccccgctggaccggcgg
tcccagcaggctcgcatctcggcctccgtcaacgccatgaaggtcctcaaccccggcacc
gacgcggaggccgccgtcgccgacgcgctgctcctaggggactcgaggagtaagcggcgg
cccgcgaggcgtcggttcgattccccgggcgtgcactctgacgacgaggcgaccagcgac
ccctccggcgtgggctcggagcgttcccacggctcacgcaacggcggcgcggcgccgggc
tacctggacgtggccgaggtgctgaaccactgcgccagcaccaactggaccgagaggaag
gaggggctgctggggctgcagggcctgctgaggggccaccgggcgctcagccgcgtggag
ctgaagaggctctgtgagatcttcacacgcatgtttgcagacccgcacagcaagagggtc
ttcagcatgttcctggagaccctggtggacttcgtctccctgcaccgggaggagcttctg
gattggctcttcgtgctgctcacccagctgctgaagaagatgggggcggagcttctgggc
tcggtccaggccaaagtccagcgggccctggacgtcaccagggagtccttcccctcccag
ctgcagttcaccatcctgatgcggttcatcgtggaccagacccagacccccaacctgaag
gtgaaggcggccacgctgcgctacatcgcggcgctggcccgccagatggacccggccgac
ttcgtcaactccagcgagacgcggctcgccgtctcccgggtcatcacctggaccaccgag
cccaagagcgccgacgtccgcaagacccttcacagctgggcgggggaggacgtgtccggc
cggcccaccggggacaacctggaggagaggtgcaagcaggccgcccaggtggtcctcatc
tgcctctttgaactcaacactccagagttcacgatgcttctcggcgctttgcccaaaaca
ttccaggacggcacgacgaagctgctgcacagccacctgaggaccgccagcatgaacatg
gctcccagcgcccggaccagtagaaccagcagcctgcgcagcccgctgcccccccccccc
agctgctcccaggggggtcttcctcccagtcggctgtggagcgcagacgggctctccaaa
ttccctattccacctttcccctccccccttcctccacccaccgttgtgaggtcagcgtac
tcacccagcacgctggacaacgacagcgagaacctgaagtcggaggagatctccagctcg
ctcaggggcgtcaccgaggccatccagacctccagctgccacagccaggaggaggtgaag
agggagccggccttcggggcgtcgtgggacagcggcgtggcggtgggcgctcgcccggcg
ctgctcaacacgccgccgccgcgctccttcgccgcgccgcgcttccgtgactacaacccg
tacaactacacggacgccctggagcaggaggcgctgaaggaggcgcagctcgacgacgac
gaggagacgccgcgagacggcggccaacaggacaacaggagcccccggagcttcccagcg
agcccctcggagcagctggcgctggtcggggatctcctgaaggaggtctcccagggccag
gcggggggccgcggccccgaggagcgccgggggaccctcctggagctgctgaaggcggcc
cgcgaggacagcctggtggtctgggaggagcacttcaagaccacgctgctgctgctgctg
gagacgctgggggaccaagaccacaccatccgggcgctggccctgcgggtcctgaaggag
gtcctgaggacccagccgggccgcttcaagaactacgccgagctcacggtcatgaagacg
ctggaggcccacaaggactcgcacaaggaggtggtgcgcgcggcggaggaggcggcctcc
acgctggcgacctccgtccagccggagcaggtcatcaaggtgctgagccccatcgtgcag
acggccgactaccccgtgaacctcgccgccatcaagatgcagacccgcgccatcgagcgc
acggccaaggaggcgctgcacctcctgctgccggacctggtccccgggctcctgcagggc
tacgacaacacggagagcagcgtgaggaaggccagcgtcttctgcctggtggccgtgtac
tccgtgatgggggaggagcttaagccctacctggctcagctgaccggcagcaagatgaag
ctgctcaacctctacatcaagagagctcagacctccaccagcaccagcagcagctcctcc
gacatctcctcctactga
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integrated database retrieval system
