Pseudoliparis swirei (Mariana hadal snailfish): 130204303
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Entry
130204303 CDS
T09868
Symbol
pspc1
Name
(RefSeq) paraspeckle component 1
KO
K24993
paraspeckle component 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130204303 (pspc1)
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130204303 (pspc1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
130204303
NCBI-ProteinID:
XP_056286907
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All DBs
Position
14:4096083..4103924
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AA seq
541 aa
AA seq
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MANRNMQQAPAQSNSSPQPPRSGTESPAQAPANKDSPAPPPPPQPPAAGPAGGAGEGLEE
GRAEMTLDITSFRKPGEKTFTQRSRLFIGNLPLDLPEEEFKNMFVKYGNISEVFINRDRG
FGFIRLETRTLAEIAKAELDGTVLNNRPIRVSFAMHTAALTVRNLLPAVTNELLEEAFSQ
FGLVERAIVVTDDRGRPTGRGIVEFANKAAARKALERCAEGALLLTTTPCPAIVEPSEHF
DNEDGQPEKLLQKSAAYYKEREQTPHFAQPGTFDFEYSSRWKALHEMEKQQREQVDKNIR
EAKEKLQAELEAAKHEHQLMLMRQDLMRRQEELRRLEELRNQELQRRKQIEMRHEEELRR
RREEEMRLREQEDMRRHPEGFKPNYLDNREQEMRVGELGPRGAVNMGDGFNQGSPGPGGN
QGQMMGMSGRGGAIGPEGTANMGTPVMSENGAMRKDRYSQGAPMGRPEVESPKLQQQTPP
QQQQQQQQQQQQQQQQQQQQQQQQQLQQQQQQQPPPLGPQAGRGSPVGGVFDGPNSKRRR
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgaaatatgcaacaagcgcctgcgcagagcaacagttccccccaaccgccg
aggagcgggaccgagtccccggcgcaggccccggcgaacaaagacagtccggcgccgccg
ccgccgccgcagccccccgcggccgggccggcggggggagccggggaagggctcgaggag
ggccgggctgagatgactttggatatcacgagctttcggaagcccggggagaagacgttc
acccagcgctcgcgcctcttcatcgggaacctcccgctggacctaccggaagaggagttc
aagaacatgttcgtaaaatacgggaatattagcgaggtgttcatcaacagagaccggggc
ttcggctttattcgtctggaaacccgcacgctggcagagattgccaaagctgagctggat
gggactgttttaaacaaccgacccatcagggtcagcttcgccatgcacactgccgccctc
accgtgcgcaacctgttgcccgcggtaacaaatgagctgctggaagaggcgttctctcag
ttcgggctggtggagcgagccattgtcgtgacggatgaccgcggccgccccaccgggaga
ggcatcgtggagtttgcgaacaaagcggctgcacgcaaagctctggagcgctgcgcggag
ggagcgctgctgctgaccaccacgccttgtccggccatcgtggagccctcggagcacttc
gataatgaagacggacagccggagaaattgctgcagaagtctgcggcgtactataaggaa
cgagagcagacgccccattttgctcagccggggacgtttgattttgagtattcgtctcgc
tggaaagctcttcacgagatggagaaacagcaacgagagcaggtggacaagaacatcaga
gaggccaaagagaaactgcaggcggagttggaggcggccaaacacgaacaccagctcatg
ttaatgagacaagatctcatgaggcgccaggaggagctgaggaggctggaggagctccgc
aaccaggagctgcagaggaggaagcagatagagatgaggcacgaggaggaattgaggagg
aggagagaggaggagatgagactcagggaacaggaggacatgagacgccacccggagggc
ttcaaaccaaactacctggacaacagagaacaggaaatgagagtgggtgagctgggccct
cgtggagccgttaatatgggagatggcttcaaccagggctcgccggggcccggtgggaac
caaggtcaaatgatgggcatgagtggaaggggaggagccattggcccagaggggacggca
aacatggggacgccagtgatgtcagagaatggagccatgcgaaaagatcgatactcgcag
ggggccccgatggggcggccagaggttgagtccccaaagctgcaacagcagacgccacca
caacaacaacaacagcagcagcagcagcaacaacagcagcagcagcaacaacaacaacaa
caacaacagcagcagctacaacagcagcagcagcaacaaccgccaccgttgggccctcaa
gctgggagggggagcccggtcgggggggtctttgacgggccgaacagtaaacggcgccgg
tattaa
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