KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130204310
Entry
130204310         CDS       T09868                                 
Symbol
rif1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pswi03032]
    130204310 (rif1)
DNA replication proteins [BR:pswi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    130204310 (rif1)
SSDB
Motif
Pfam: Rif1_N HEAT_ULK4
Other DBs
NCBI-GeneID: 130204310
NCBI-ProteinID: XP_056286928
LinkDB
Position
2:21974930..21992162
AA seq 2426 aa
MMATAEPPSGSGLLHLLESLEDDGAGPAEHTDAYLTIANRLSGDEGRQFLPAVEKHFPRL
GRAILAHVTSPTAELSQAALQALGFCLYHSHVVSGVPETFAAEILSSLCSLVGKSPDKNT
CTRALWVISKQSFPPAVVGQNVSAILGMLEGIWGRGDVQSVVMEHEALNVIIRLLEQAPA
QMADGAVRWAKLVVPLVVHSAAKVRLRAAAAMETGMPLLLEKRAQVAGVIEPMMSSKLIP
ELQKLFLSKNEANVLKLWPLFVKLLGKLLHRGGPFINSLLHLEELGFRSSSPAIKKIAFI
AWKSLIDNFALNPDILCSAKRMKLLMQPLASINVRTEVLLLTKVEVWWYLAVQLGPNLLP
NFDQVSVPLLQCTIGSDAPLVPGTPSRAVGPNGAVPPGTPKSGFISPATTPRLSLNASLQ
IPSVFPSIQLLGLEMLLHYFLGPEVVATAAKRKLVLSLEPLSHPLLLGASSFTKHAAVLT
ANLRDGFINVGKDAPESLLAVLWTSLVRFVNLTIESAGSKKDRQGGEVLTLMLQALQSIV
TSEALPADKVLILFEATVKGIPQRVLGSASYQVGKMDVLNGTPALFLILLLYNSSSLSAY
IEDERFFQSLQTLVGCGLSGPTSPLAFGEAVLGAIGRSAESVQNKEQLYRMWSAMVVPLT
DTVTQSNEVNQGDALEHNFGAMNSALMFPVTRLLQGTPLPQAAQKSMLSSWGKLYTVFAR
CSALVVTAEENVCCEELCAKIAAVIDRDALMVPSTLHAVASVLQVMAECVDFSPFTPQFQ
NKLKSPHTPVNWTRKRNKVLGNLSTFQSLLVQCLEVYLQGPEAPPSDATGLALVSVLSAL
FGNLALANTVKEAVTSLVRPLALFYERAAGEPPPFSPQLLGKLDKLLCEVLCCLQSRSAL
AFDDELLALLAPLLCAWFPHKNKQLRAAVAQFWNATFGNSLSLTYPDEIRQILSHVKQKT
PIILPGFVIVGIPDELSETNSSESSQLETNLSGMPVSSAAGKRDSLQRKAAEPKAPKSVS
TKLDFGSPKPPPRGVLEEEASIDFVFIPPQTKERVLTEHQKEVKRTKRVDIPAMYNNLDA
SLDTSVFTQYTQGQDDSLEKLATEGAADEETKEAPGNGTETHSIKVPPKDAEKKDSEAPQ
DFVSQEAVENMPDSHQQKEIIPESADISMEDDDGAEDLDPQSTERTSPNISGSSDLVSGT
PQKPNSRRQSFITLEKYAEGKPASPSSASTFTGILIKTPNSQKSSKTSRTSSSQTSTGPN
SQDSQSSQTGNMISQCPGNNALESPVRPKGSGRKSEPVRLTERLPSDPTVDEDVIPDTQT
LAGKEGPEVASSSEDTQPSSQEEDSEPTLDASQSSPGESRRSTRPRVRPQLTGDDEWEDK
YTPSKRRRSGEEPKGESPKSSSSQSRCNTRSMQAAEEEGVKDRLRTRPQRDKRASSQTNS
HGKAHKRIKLFSSSQDFLDKPEPKRRSAGGLQSSQSDLQSDNESQSQGRQRRRSRATVEI
KEDGDVKKMVLPDEESSQSGKHEPVEQAKKGDESKEESQTVTPSPQPGGTTSPQTGGTAS
PQTGGTASPQTGGTASPQTGGTTSPQTGGTTSPQTGSTASSQPGGTASPQTGGTAYSQTI
RRPLESELLEKTIKEERDFRMVSASPATEESQYGTHVTIRLVNKSKVKDELETNDSTEDN
RSQEDSQAATPSSDSQSLRRSRRSKSSAEAAGSEDKSKNKESLESRSTSDSQPEAGMGGR
PRRSKVQEEQSKSSPNARSSQSETVGSAESPKGKNLSRSSPALPVASKESSESESSEVKE
SPGVPKKRGRKLKVSCPSPLTIEPKEGQMNTGTVEDDPDASQKVDSQSVEDESIPALAES
QTSQDLQDCDSLQVASNSEEQSNEGTQMEADAVVEKTESNSLGASPREEQTQKDSSIERT
SSQEGGTGNLPPAEVLEPAGIGSEQTREEATCDAPSSSVEDSVVTTEELQTSESSEEKAG
EELESETQPQDSDPTRQEEPIVPVEEPAEGGCSASSVPELDSNDDESTARHAEADAGDAV
PPLQEGDKDESQIADGETPTAEDEEDVVAHLAVALADVGDPLLTESTSRGVNPGSPAKQK
DLEALIEADVGDSPRTRGTWSPSASPSSSILKKGLKRPLEEEPTSPLVKSRRVSFANPIQ
HQEVADNIDRRSPTIRTSSPRRSKGSGIPQPKYVTTPTKGLLILSPRNLHSPGYKSSKKC
LISVMSQEPRPVSRDSIYPSLIGCSTPVEAVLPQISSNMWCRGFGQLVRARNIKTVGDLS
ALTPSEIKTLPIRSPKISNVKRALKSYELQRKGRGGDEMTTSDLEVAAPQNPDEEDKTSG
ETLATELVDEGPEGDGSGNRTPGTPSGDREHDPEARLRSEVDALTGSMTPRELGRCSPTR
LLQIHEQLGGLMRRVAVELQTRLCRP
NT seq 7281 nt   +upstreamnt  +downstreamnt
atgatggcgacggcggagcctccgagcggctccggcctcctccacctgctggagtcgctg
gaggacgacggcgccggtccggccgagcacacggacgcctacctcaccatcgccaatcgg
ctcagcggagacgagggccggcagttcctccccgcagtggagaagcacttcccccgtctg
ggccgagccatcctggcccacgtcacgagccccacggcggagctcagccaagccgcgctg
caggcgctcggcttctgcctgtaccactcccacgtcgtctcgggggtgcccgaaaccttt
gcagcagaaatcctgtcgtcgctctgctccctggtggggaagtctcccgataagaacacg
tgcaccagagcattgtgggtaatctccaagcagagctttcctccagccgtggtgggccag
aatgtgtcggccatcttgggaatgctggagggcatttggggccgaggcgacgtgcagtcc
gtggtgatggagcacgaggccctgaacgtcatcatcaggctgctggagcaggcgccggcc
cagatggcggacggcgccgtccgctgggcgaagctcgtcgtgccgctggtcgtccactcc
gccgccaaggtgcgcctgcgggccgcggccgccatggagacggggatgcccctcctcctg
gagaagcgcgcgcaggtggccggcgtcatcgagcccatgatgtcatcgaagctgatcccg
gagctgcagaagctcttcttgtctaagaacgaggccaacgtgctgaagctctggccgctg
ttcgtcaagctgctggggaagctgctgcacagaggggggcccttcatcaactccctgctg
cacctggaggagctcggcttccgcagctcgtcgcccgccatcaagaagatcgccttcatc
gcctggaagagcctcatcgacaacttcgccctcaacccagacatcctgtgcagcgccaag
cgcatgaagctcctgatgcagccgctcgcctccatcaacgtgcgtacggaggtgctgctg
ctcaccaaggtggaggtgtggtggtacctggcggtgcagctggggcccaacctgctgccc
aacttcgatcaggtgtccgtccctctgctccagtgcaccatcggctccgacgcccctctg
gtccccggcaccccttctcgagccgtcggtccaaatggtgccgtcccaccgggcacgccc
aagtccggcttcatcagtccggccaccacaccgcggctcagcctgaacgccagcctccag
atcccctcggtcttcccctccatccagctgctcggcctggagatgctgctccactacttc
ctggggccggaggtcgtcgccacggcggcgaagagaaagctcgtcctgagtctcgagccg
ctgagccaccctctcctcttgggggcgtcctcgttcaccaagcacgccgccgtgctcacc
gccaacctgcgggacggattcatcaacgtcggcaaagacgctccagaatctcttttggcc
gttttgtggacgagtctcgtccggttcgtcaacttgacgatcgaatccgcaggcagtaag
aaggaccggcagggcggtgaagtcctgacgctgatgctccaggctctgcagagcatcgtc
acctccgaggctctgcctgcagacaaagtcctgattctgttcgaggccacggtgaaagga
atcccccagagagtcctcggctccgcctcctaccaagtgggcaagatggacgtgctgaat
ggaacgccggctctgttcctcattctcctgctctacaacagcagctcgctctccgcctac
atcgaggacgagaggtttttccagagcctccagacgctggtgggctgcggcctgtcgggc
cccacctccccgcttgcgtttggcgaggcggtgctgggcgccatcgggcgcagcgccgag
tcggtgcagaacaaggagcagctgtacaggatgtggagcgccatggtcgtcccgctcacc
gacaccgtcacacagtccaacgaagtgaaccaaggcgacgctctggagcacaacttcggc
gccatgaactcggccctgatgttccccgtcacgcgcctcctgcagggcacgccgctaccg
caggcggcccagaagtcgatgctgtcgtcgtggggcaagctctacacggtgttcgcccgc
tgctccgcgctcgtggtcacggccgaggagaacgtctgctgcgaggagctctgcgccaag
attgctgccgtgatagacagagatgcgctgatggttccgtccacgctgcacgccgttgcc
agcgtcctccaggtcatggccgagtgcgtggacttctcgccgttcacgcctcagtttcaa
aacaagctgaagtcgccgcacacgccggtgaactggaccaggaagaggaacaaggtcctc
ggcaacctgtccaccttccagtccctgctggtccagtgcctggaggtctacctgcagggc
cccgaggcgccgccctccgacgccacggggctggccctggtgtccgtgctctcggcgctg
ttcggcaacctcgccctcgccaacaccgtgaaggaagccgtgacgtctctggttcgcccg
ctcgccctcttctacgagcgggcggccggcgagccgccgccgttctccccgcagctcctg
ggaaaactggacaagctgctctgcgaggtcctctgctgcctgcagagccgctcggcgctg
gcgttcgacgacgagctgctggcgctgttggcgccgctgctctgcgcctggttccctcac
aagaacaagcagctccgcgccgccgtcgcccagttctggaacgccaccttcggcaactcg
ctcagcctcacgtaccccgacgagatcaggcaaatcttgagccacgtgaagcagaagaca
ccgatcatccttcccggcttcgtgatcgtcggcattcccgacgaactcagcgaaaccaac
tctagtgagagttcccagttggaaaccaacctcagtgggatgccggtttcctccgcggcg
gggaagagggactcgctgcagaggaaggctgctgagcccaaggcccccaagtcggtctct
accaagctggactttggctctccgaagcccccccccagaggggtcctggaggaagaggcc
tccatcgacttcgtcttcattcctccccagacgaaggagcgagttctgacggagcaccag
aaggaggtgaagagaactaaaagggtggacatccccgccatgtacaacaacctggacgcc
tctctggacacgtcggtgttcacccagtacacgcagggtcaagacgactccctggagaaa
ctggcaacggaaggagctgccgacgaggaaaccaaagaggctcctggcaacggaacggaa
acgcacagcatcaaggttcctcccaaagatgcagaaaaaaaagactctgaggcccctcaa
gattttgtcagccaagaagcggtagaaaacatgccagacagccaccagcagaaggagatt
atccccgagtcggcagatatttcaatggaggatgacgatggtgcagaagacttggacccg
cagtctaccgaacgcacgagtcccaacatctcaggttcttcagatctggtctccgggaca
ccccagaaacccaacagtcggcgtcagtcctttatcaccctggagaagtatgccgagggg
aaacctgccagccccagcagtgcatccaccttcacaggtatcctcataaagaccccaaat
agccaaaaaagctccaaaaccagcaggacatcgtcctcccagacatccactggtcccaac
tctcaggattcccagtcttcccagacgggtaacatgatctcgcagtgtcctgggaacaat
gccctcgagtccccggtcaggccaaaaggctctgggagaaaaagtgagccagtaaggctg
actgagagactgcccagtgacccaacggtggacgaagacgttatccccgacacccagact
ctggcgggcaaagagggtccggaagtggcttcctcatcagaggacacgcaaccatcaagc
caggaagaggattctgaaccaactctggacgcttctcaatcttctccaggcgaatcgagg
cggtctacacgccccagagtcagacctcagctgaccggagacgacgaatgggaagataaa
tatacgccgtcgaaaaggaggcgttctggagaggagccaaaaggggagtctccgaagtcg
agctcgtcgcaaagcagatgcaacacgagaagtatgcaagcggctgaggaggaaggcgtt
aaagacagattacgaacaaggcctcagagggacaagagggcgtcgagccaaaccaactct
cacgggaaagcacacaagaggatcaagctgttcagtagttcacaggacttcctcgataaa
cctgaacccaaaaggagaagcgccggcgggcttcagtctagccaaagtgacttgcagtcc
gataacgaaagccagtcccagggcaggcaaagacggcggagtagagcaacggtggagatc
aaggaggacggcgatgtgaagaagatggttttgcctgatgaggaatccagccaaagtggc
aaacatgagccggtagaacaggccaaaaagggtgatgagtcgaaggaagagtctcaaacg
gtcactccttccccccaacctggtggcactacttccccccaaactggtggcactgcttcc
ccccaaactggtggcactgcttcccctcaaactggtggcactgcttcccctcaaactggt
ggaactacttcccctcaaactggtggcactacttcccctcaaactggtagcacagcttcc
tcccaacctggtggcacagcttcccctcaaactggtggcacagcttactcccaaaccatt
agacgacctttagagtctgagcttttagaaaagaccatcaaggaagagagagattttcga
atggtctctgcttcgccggcgactgaagagtcccagtatggaacgcacgtgaccataagg
ttggtaaataaatcaaaggttaaagacgaactcgaaactaatgacagcacggaggacaac
cggagtcaagaggattctcaagcggctaccccttcttctgacagccagtcgctgcgtcga
tccagaagaagcaagtcatcggccgaggctgcggggtccgaagacaaaagtaaaaataag
gagtctttagaaagccggagtacctccgattctcagccagaggccgggatgggaggaagg
cccagacggagcaaggtacaagaggagcagtcaaagtcgagtcctaacgcaaggagttct
caatcggagactgtcggatcagccgaatcacccaagggcaaaaacctcagcagatcttcc
ccagctttgccagtcgccagtaaagagtcgtctgagtccgaatcatcggaggtcaaagaa
agtcctggtgtgcccaaaaagagggggaggaaactcaaagtgtcttgtccaagtcctctc
actattgaacctaaagaaggtcaaatgaatactggtacggtagaggatgatcctgatgct
tctcagaaggtagattcccaaagcgtagaagatgaaagcataccggcgttggcggaatcg
cagacatcgcaagacttgcaggattgtgactcgctccaggttgcatccaactctgaggag
caaagtaatgaaggaacccagatggaggctgatgctgttgttgagaaaactgaatccaac
tcgctcggtgcgtctcctcgcgaggagcaaacgcaaaaggactcctccattgagagaacc
tcttcgcaggaaggaggcactgggaacttgcccccggctgaggtgcttgaaccagccggg
atcggctctgaacagactcgggaagaggcgacctgtgacgccccttcgtcgtctgttgag
gactcggttgtgacgaccgaagaactgcagacctcggagtcttcggaggagaaagctgga
gaagagttggagtctgaaacccaaccgcaggactcggacccgactcgccaagaagagccg
attgttcccgtcgaggaaccggctgaaggcggttgcagtgcctcctctgttcccgagtta
gactccaacgacgacgaatcgaccgcccggcacgcagaggccgatgccggggacgctgtg
ccgccgctacaggagggcgacaaagacgaatcccaaattgcggacggagaaacgccgacc
gccgaggacgaggaagacgtggtcgcacatctagccgtcgctctggctgacgtcggcgat
cctttgttaacggagtcgacgagccgaggggtcaacccgggttctccggcgaagcagaag
gacctggaggctttaatagaggcagatgttggcgacagcccccggaccagagggacctgg
tctccttcggcctccccatcgagcagtattctgaagaagggcctgaagaggcccctggag
gaggagccgacctcgcctctggtcaaatccagacgcgtctcttttgctaatccaatccag
catcaggaggtggcggacaacatcgaccgtcgcagccccaccatcagaaccagctccccc
aggcgctccaaaggcagcggcatcccccagcccaagtacgtcaccacgcctacaaaaggt
ctgctgatcctgagtcccagaaatctgcacagtccgggttacaagagctccaagaaatgc
ctgatttccgtgatgagccaagagccgcggcccgtctccagagactccatctacccttct
ctgattggctgctccacgcccgtggaagccgtgctgcctcagatctcctccaacatgtgg
tgccggggtttcgggcagctggttcgagccagaaacatcaaaaccgtcggcgacctcagc
gcgctgacgcccagcgagatcaagactctgccgatccgctcgcccaagatctccaacgtc
aaaagagctctgaagagttacgagctgcagcgtaaaggacgaggtggcgacgagatgacg
acctctgacctggaggtcgctgctccccagaacccggacgaggaggacaagacctccgga
gagacgctcgccacggagctggtggacgaggggcccgagggagacggctccgggaatcgg
acgcccggcacgccgtccggagaccgagagcacgaccccgaggcccggctgcggtcggag
gtggacgccctgaccggcagtatgacgccccgggagctgggccgctgctccccgacgcgg
ctgctccagatccacgagcagctgggcggcctgatgcggcgcgtggcggtcgagctgcag
acgcgcctctgccggccgtga

DBGET integrated database retrieval system