Pseudoliparis swirei (Mariana hadal snailfish): 130204344
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Entry
130204344 CDS
T09868
Symbol
agap1
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130204344 (agap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130204344 (agap1)
Membrane trafficking [BR:
pswi04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
130204344 (agap1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
PH
Ank_2
Ank
Ank_4
Ank_5
Roc
PH_6
Motif
Other DBs
NCBI-GeneID:
130204344
NCBI-ProteinID:
XP_056286975
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Position
14:complement(1019719..1095455)
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AA seq
853 aa
AA seq
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MNYQQHLANSAAIRAEIQRFESVHPNIYSIYELLERVEEPLLQNQIREHVIAIEDAFVNS
QEWTLSRTVPELKVGIVGNLASGKSALVHRYLTGTYVQEESPEADVDAGGRFKKEIVVDG
QSHLLLIRDEGGPPEAQFSLWVDAVIFVFSLEDEISFQTVYHYFSRLASFRNSGELPLVL
VGTQDAISSANPRVIDDGRARKLSNDLKRCTYYETCATYGLNVERVFQDVAQKVVASRKK
QQLSIGPCKSLPNSPSHSAVAAPPPAAAAAAVSQTSNGGGGLSDYSSSVPSTPSTSQKEL
RIDVPPGANTPTPVRKQSKRRSNLFTSRKASEPDKKGLEARADSIGSGRAIPIKQGMLLK
RSGKTLNKEWKKKYVTLCDNGLLTYHPSLHDYMQNVHGKEIDLLRTTVKVPGKRPPRAVS
AGAAGPSPKTNGLAKDLSGLQLGQQAAGQVTSSTSASQMASGISLVSFGRGLEGMHQRSY
SVSSADQWTDATVIANSGVGTDPGLGDPASSTTSPKMEPPPSPHANRKKHRRKKSTSTFR
ADGPAGPEEQEENFEFTIVSLTGQTWHFEATSYEERDAWVQVVESQILASLQSCESSKHK
SRLPSQTEALALQAIRGVRGNGRCADCGAQNPNWASLNLGALICIECSGIHRNLGTHLSR
VRSLDLDEWPLELLKVMSAIGNELANSVWEANAQGRLKPAPDASREERERWIRAKYEQRV
FVAPLPAGAELSLGQQLLRAAAEEDLRSVVLLLAHGSRQQVNETCGDGDGRNALHLAGRK
GNVVVTQLLIWYGVDLMARDAHGNSAMAYARQAGSQECVDTLAQYGCPDERSPLMATPNL
PRRNNRSNSAALM
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaactaccagcagcacctcgccaactcggccgccatccgagccgagatccagaggttc
gagtccgtgcaccccaacatctactccatctacgagctgctggagcgggtggaggagccg
ctgctgcagaaccagatccgggagcacgtcatcgccatcgaagatgcgttcgtgaacagt
caggagtggacgctgagccgcacggtgccagagctcaaagtgggcattgtgggtaatctg
gccagcggtaaatcggcgctcgtccacagatatctgacggggacgtacgtccaggaggag
tcgcctgaagctgacgtggacgcaggcggtcgcttcaagaaggagatcgtggtggacggt
cagagtcacctgctgctcatcagagatgaaggaggccccccagaggcccagttctccttg
tgggtggatgccgtgatcttcgtgttcagcctggaggatgagatcagcttccagaccgtg
tatcattacttcagccgcctggcgagcttcaggaactcaggagagctcccactggtgctg
gtggggacccaagacgccatcagctcggccaacccgcgggtcatcgacgacggaagagcc
cggaagctctccaacgacctgaagcgctgcacgtactacgagacctgcgccacctacggg
ctgaacgtggagcgcgtgttccaggacgtggcccagaaggtggtggcgagcaggaagaag
cagcagctctccatcgggccgtgcaagtcgctgcccaactccccgagccactcggcggtc
gccgcgccgccgcccgccgccgccgccgccgccgtcagccagaccagcaacggcggcggc
ggcctgagcgactactcgtcgtccgttccgtccacgccgagcaccagtcagaaggagctg
cgcatcgacgtgccgccgggcgccaacacgcccacgcccgtcaggaagcagtccaagcgc
cgctccaacctcttcacatccaggaaggccagcgagccggacaagaaaggcctggaggct
cgagccgacagcatcggcagcgggagagccatccccatcaaacaggggatgctgctgaag
cgaagcgggaagacgctgaacaaggagtggaagaagaagtacgtcacgctgtgtgacaac
ggactgctcacctaccaccccagcctgcatgactacatgcagaacgtccacggcaaggag
atcgacctgctgcggaccacggtcaaggtgccgggcaagaggccgccacgcgccgtgtcc
gccggcgccgccggcccgagccccaaaaccaacggcctggccaaggacctgagcggcctg
cagctgggccagcaggcggcaggtcaggtgaccagcagcacgtcggcgtcccagatggcg
agcggcatcagcctggtgtcgttcggccgcggcctggaggggatgcaccagcgctcgtac
tccgtctccagcgccgaccagtggaccgacgccaccgtcatcgccaactccggcgtcggc
accgatcccggtctgggggacccggcctccagcaccacgagccccaagatggagccgccg
ccctcgccgcacgccaaccgcaagaagcaccggaggaagaagagcacgagcaccttcagg
gccgacgggccggccggccccgaagagcaagaggagaactttgagttcaccatcgtgtcc
ctgacgggtcagacgtggcacttcgaggccacgtcgtacgaggagcgcgacgcctgggtc
caggtggtcgagagccagatcctggccagcctgcagtcctgcgagagcagcaagcacaag
tcccgcctgcccagccagaccgaggccctggccctgcaggccatcaggggggtccggggc
aacggccgctgtgccgactgcggcgctcagaaccccaactgggccagcctcaacctgggg
gccctgatctgcatcgagtgctcggggatccacaggaacctgggcacccacctgtcccgg
gtccggtccctggacctggacgagtggcccctggagctcctcaaggtgatgtcggccatc
ggcaacgagctcgccaacagcgtgtgggaggccaacgcccaggggcgcctgaagccggcg
ccggacgccagcagggaggagcgcgagcgttggatccgggccaagtacgagcagcgcgtg
ttcgtggcgccgctgccggccggcgccgagctgtccctgggccagcagctgctgcgggcg
gcggcggaggaggacctgcgctccgtggtgctgctgcttgctcacgggtcgaggcagcag
gtcaacgagacgtgcggcgacggagacggacgcaacgcgctgcacctcgccggacgcaag
ggcaacgtggtcgtcacgcagctgctcatctggtacggcgtggacctgatggcgagggac
gcccacgggaacagcgccatggcgtacgcgcggcaggccggcagccaggagtgcgtggac
acgctggctcagtacggctgccccgacgagcgctcgccgctcatggccacgcccaacctg
ccgcgccgcaacaaccgcagcaacagcgccgcgctcatgtga
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