KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130204362
Entry
130204362         CDS       T09868                                 
Symbol
eed
Name
(RefSeq) polycomb protein eed
  KO
K11462  polycomb protein EED
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    130204362 (eed)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pswi03036]
    130204362 (eed)
Chromosome and associated proteins [BR:pswi03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     130204362 (eed)
    PRC2.2
     130204362 (eed)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_EML WD40_RFWD3 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD_LRWD1 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd Beta-prop_Nup120_160 NBCH_WD40
Other DBs
NCBI-GeneID: 130204362
NCBI-ProteinID: XP_056287008
LinkDB
Position
14:2347860..2352851
AA seq 443 aa
MRENKNMSESPSQAGKEIPAKKQKLSSDENSNPDLSGDENDDAVSVESGTNTERPDTPTN
TANAPGRKSWGKGKWKSKKCKYSFKCVNSLREDHGQPLFGVQFNWHSKEGDPLVFATVGS
NRVTLYECHSQGEVRLLQSYVDADAEENFYTCAWTYDTNTSHPLLAVAGSRGIIRVINHI
TMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIHTDTLVAIFGGVEGHRDE
VLSADFDLLGEKIMSCGMDHSLKLWRINSERMQKAIRGSYEYNPSKTNRPFVSQKIHFPD
FSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEEEIDVMKPNESNVTILGRFDY
SQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTLPKCTSAIRQTSF
SRDSSILIAVCDDASIWRWDRQR
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgagggaaaataagaacatgtccgagtccccctctcaagcgggaaaagaaataccggcg
aaaaaacaaaaactaagcagtgacgagaacagtaacccagatttatcgggagacgagaat
gatgatgccgtcagtgttgagagtggaaccaacacagagcgccccgacacacccaccaac
actgccaacgcacccggcagaaaaagctggggcaagggcaagtggaagtccaagaagtgc
aaatattcttttaaatgtgtgaacagcctgagggaggaccacggccagccgctgtttggg
gtccaatttaactggcacagcaaggagggagaccccctggtgtttgccacagtcggtagc
aacagggtaactctgtatgaatgtcactctcagggagaagtccggctcttgcagtcttac
gtcgatgcggacgcggaggagaacttctacacgtgtgcctggacctacgacaccaacacc
agccatcctctgttggcggtcgccggatcccgcggcatcatccgggtgatcaaccacatc
acaatgcaatgcatcaagcattatgtaggtcatggaaacgccatcaatgagctcaagttt
catcccagggatccaaatctccttctgtctgtcagcaaagatcacgctctccgtctatgg
aacatacacacggacactttagtggctatatttggtggcgtggaaggtcatcgagatgaa
gtcctgagtgctgattttgatctcctgggtgaaaagattatgtcgtgtgggatggaccac
tccttaaaactttggagaatcaactcggagaggatgcagaaagccatccgcgggtcttat
gagtacaatccctcgaagaccaaccggcctttcgtctctcagaaaattcacttccccgac
ttctcgacacgagacatccatagaaactacgtggactgtgtgcggtggctcggagatctt
attctgtccaagtcctgtgaaaacgccatcgtctgctggaagccaggaaagatggaggaa
gaaatcgacgtcatgaaaccaaacgagtcgaatgtgacgattctgggtcgctttgactac
agccagtgtgacatttggtacatgcgcttctccatggacttctggcagaagatgctggct
ctggggaaccaggtggggaagctttatgtgtgggaccttgaagtggaagacccgcacaaa
gcaaagtgcacgacgctgaccctccccaaatgcacgtcggccatccggcaaaccagcttc
agccgcgacagcagcatcctgatcgccgtgtgcgacgacgcctccatctggcgctgggac
cggcagcgctga

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