Pseudoliparis swirei (Mariana hadal snailfish): 130204376
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Entry
130204376 CDS
T09868
Symbol
nup62l
Name
(RefSeq) nucleoporin 62 like
KO
K14306
nuclear pore complex protein Nup62
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130204376 (nup62l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130204376 (nup62l)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130204376 (nup62l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
QRICH1
Parb-CE
DUF4164
Motif
Other DBs
NCBI-GeneID:
130204376
NCBI-ProteinID:
XP_056287049
LinkDB
All DBs
Position
2:10021319..10023652
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AA seq
566 aa
AA seq
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MSGGFNFGQASTGFSFAAQKPTAAAPSTGFAMTSAMPDATGGSFTFGTATTQATPNPPNS
FSIGTPAKSTAAGGGFSFGTPTAPFGMVTPQPAAASPPQGMTLGTAVAPAPMSGLTMATA
APAGGGFAFGTPPQALPQPAVQLQPPAPPTATVMATPGASVPSFGGFGFGSTKVQATTAA
PVAAPVAAPVAAPGGGFSFGTSAPSNPTMAIQPQPALPAALASQGGGFPFGIKPSSTPAP
PASIQAVSAPGPSLFASPISTAAAAAAAAATSAAAATVTATGTSFNLGVAPTLAASTAAA
TTTAAGGSLAFMLKPLGAAAITSAPAPAATVAAAIAGAPTAFTLGLKPLTGISIPTTSTA
TTLSTTTAPPVMTYAQLEGLINKWSLELEDQERHFLQQATQVNAWDRMLVENGEKITALH
KEMEKVKLDQRRLNQELDFILSQQKELEDLLCPLEESVKEQSGTIYMQNADEERERTYKL
AENVDAQLKRMSQDLKEIIEHLNTSSGPADTSDPLQQICKILNTHMDSLQWIDQNSVLLQ
RRVEEVSKLCDNQRKDQEKTFRLTFD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcggtttcaacttcggtcaagcctccacgggcttctccttcgcagcgcagaaa
ccaaccgctgcagcccccagcacgggcttcgcgatgactagcgccatgcctgatgccact
ggagggagcttcacatttggcactgctaccacccaggccacccctaaccctcccaactct
ttcagcattggcaccccggcaaaaagcacagcggccgggggaggcttctcttttgggacc
cccaccgccccatttggcatggtcactcctcaacccgcagcagcatcgccacctcaaggg
atgactttaggcaccgcagtagccccagcgccgatgtcagggttaaccatggcgaccgcc
gctcctgcaggaggaggctttgccttcggtacgcctcctcaagctctaccccaacccgca
gttcaactccaacctccagcaccaccaacggccacagtaatggcaactccaggagctagc
gtcccctcatttggagggttcggctttggatcaaccaaggtccaggcgaccacagcggcc
cctgttgcggcccctgttgcggcccctgttgctgctccaggggggggcttcagctttggc
accagtgctccatccaaccccaccatggccattcagccccagcctgcactccctgctgca
ctcgccagtcagggtggaggttttccctttgggattaaaccctcatcaaccccggctcct
cctgcatcaatccaggcagtctcggctccaggcccgtctctctttgcttcacccatctct
acagctgccgccgccgccgccgccgccgccacttctgctgctgctgcgaccgtcactgca
acggggacatcatttaatttgggtgtagctccaactttagcagcaagcactgctgctgca
accacaacagcagcaggtggaagtctggcttttatgcttaaacctctgggggcagctgcc
atcacctctgccccggcgcccgctgccactgttgcagctgcgatagccggtgctccgaca
gcctttacactgggactcaaacctttgaccggcataagcatcccaacaacttctacggcg
acgaccctctctacgaccactgctcctccagtgatgacctacgcccagctcgagggtctt
attaacaagtggagtcttgagcttgaggaccaagagagacatttcttacagcaggctact
caggtgaacgcctgggaccgcatgctggtggagaacggcgagaagatcacagccctgcat
aaggagatggagaaggtgaagctggaccagaggaggctaaaccaggagctggacttcatc
ctctcccaacagaaagagctggaggacttgctctgcccgctcgaggagtcggtgaaagag
cagagtggaaccatctacatgcagaacgccgatgaggaacgggaaagaacgtacaagctt
gcagagaacgtcgacgcgcagctgaagaggatgtcgcaggatctgaaggagatcatcgag
cacctgaacacgtccagtggcccagcagacaccagtgacccgcttcagcagatctgtaaa
attctcaacacccacatggattcacttcagtggatcgatcaaaactctgttcttctgcag
aggagagtggaagaagtgtctaaattgtgtgacaaccagcgcaaggatcaggagaagacc
tttcgtcttacgtttgactga
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