Pseudoliparis swirei (Mariana hadal snailfish): 130204404
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Entry
130204404 CDS
T09868
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04136
Autophagy - other
pswi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130204404 (atg13)
04136 Autophagy - other
130204404 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130204404 (atg13)
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130204404 (atg13)
Membrane trafficking [BR:
pswi04131
]
Autophagy
Autophagosome formation proteins
ULK complex
130204404 (atg13)
Atg1 complex
130204404 (atg13)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
130204404 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
130204404
NCBI-ProteinID:
XP_056287095
LinkDB
All DBs
Position
14:complement(7798717..7805240)
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AA seq
531 aa
AA seq
DB search
MDSGLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKIGTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLNGLGEGFQMVRVGGVGTPV
GTVTLTCAYRTNLAFMSNRQFERSAPIMGIIVDHFVDGGPRPANVGHPCNYRAPGEDYAG
QYAGVHDSQEVCTTSFSTSPPSQCVCTVSPSPSKLSKPLPLDSLPLPLAPGLVTHTLHAS
RLSYHPPAFTGAAEFCHPAAKQVLHAGKDHGGVASVPAQADAHLTAETAGSSGEDDGPTH
SGERRRRRDGGGRSASPCDPVAALNAFTRKIGAFVNKPNTPVTAAGLDLPFAAFAPRGLD
FEENDPMVQPPDSPPCHSPLQGSLHSQGSEGSAQQDDFVMVDFRPAFSNDDLVPMDLGTF
YREFQNPPQLASLSLHVSAQSMADDLDSLPEKLAVYEKNIDEFDAFVDMLQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggcctgagtccccaggataaaaaggacttggacaagttcattaagttcttt
gccttgaagactgtccaggtgattgtccaagctcgtcttggagagaagatcggcactcgc
tcgtcctcatcgccgactggctctgattggtttaatttggccatcaaagacatcccagaa
gtgactcatgaagccaagaaggcactggctggccaactcccaggcatcgggcgctccatg
tgtgtcgagatctccctcaagacgtcggagggagactcaatggagttggagacttggtgc
ctggaaatgaatgaaaagtgcgataaagacatcaaggtgtcgtatacagtctacaaccgt
ctgtccgtccttctgaagtctctgctggccatcaccagagtaacacccgcctataaacta
tccagaaagcagggccacgactacgtcatattatacaggatttacttcggggaagtccag
ctcaacggattgggagaaggttttcagatggtccgcgtcggcggcgtcggcaccccggtc
ggcacggtgacgctcacatgcgcttaccgcaccaacctggcgttcatgtccaacagacag
tttgagcggtcggctccgatcatggggatcatcgtggatcactttgtggacggcggcccg
cggccggccaacgtgggccatccctgcaactacagagctccgggtgaagattacgcagga
caatatgcaggggttcatgattcgcaggaggtctgcaccacctccttctccacctcccct
ccctcacagtgtgtgtgtacagtgagtccttcgccctctaaactgtctaagcccctccct
ctggacagtctgccacttccactggctcctggacttgtcactcacactctgcatgcttcc
aggttatcatatcatcctccagctttcacaggagctgctgagttctgtcaccctgctgca
aagcaggtgttgcatgctgggaaggatcatggaggggtggcgtcggttcccgcccaggcc
gacgctcatctgacggcggagaccgccggcagcagcggtgaggatgacggcccgacgcac
agcggagagaggaggcggcggcgggatggaggtgggaggagcgcgtcgccctgtgacccg
gtggcggctctcaacgcgttcaccaggaagatcggagcctttgtcaataaacccaacacg
ccggtaacagcggccggtctggacctgccgtttgccgccttcgctcctcgaggcctggac
ttcgaggagaatgatcccatggtgcagcctccggactcccctccctgccactcccccctg
cagggcagcctccattctcagggctctgagggatcggcgcagcaggatgactttgtcatg
gttgactttcgtccggccttctctaatgacgacttggtgccgatggacctgggcactttc
tacagggagttccagaacccccctcagctggccagcctctcgctccacgtcagcgctcag
tcgatggccgacgacctggactcgctgccagagaaactggcggtttacgagaaaaacatc
gacgagtttgacgccttcgtggacatgctccagtag
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