Pseudoliparis swirei (Mariana hadal snailfish): 130204416
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Entry
130204416 CDS
T09868
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 5
KO
K08620
a disintegrin and metalloproteinase with thrombospondin motifs 5 [EC:3.4.24.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130204416
Peptidases and inhibitors [BR:
pswi01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
130204416
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Gene cluster
GFIT
Motif
Pfam:
ADAMTS_spacer1
Reprolysin
ADAMTS_CR_2
Reprolysin_5
TSP1_ADAMTS
Reprolysin_3
TSP_1
ADAMTS_CR_3
TSP1_spondin
Reprolysin_4
Reprolysin_2
Peptidase_M10
Pep_M12B_propep
DUF4953
Motif
Other DBs
NCBI-GeneID:
130204416
NCBI-ProteinID:
XP_056287116
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All DBs
Position
14:complement(6575658..6597864)
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AA seq
965 aa
AA seq
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MVRILGALAEGMLCFRLLLLCVVELDLGAALSTFQGFYLPPANGSLLTPARRADGVVRTI
DRIYHGGGKVGYLVYLDGRRFQLDMERDDMALSHHFSPQYVLAMMGDSPAALLRECVYRG
TVDSNPESLAVFNLCGGGLEGFFALDHARYTITPIIRAKGHEHNVRALQDKDVESALHVF
TRESFSFEAMREGRESCGTRDGRRGRRDAAGKRGRHRGRATRRRDGESDAEESAGGHGAR
GRTWWSRLANAAAPVHGTRSRRSVSRARHVELLLVADDTMTKKYGKELNHYLLTLAAIAS
KLYGHASIENPIRLTVVKVTVVTEKEKGLDVSKNAAATLKSFCKWQNQQNPLDDDHQQHH
DAAILFTRQDLCGHHSCDTLGMADVGTICSPARSCAVIEDDGLHAAFTVAHEIGHLLGLS
HDDSKFCEERFGVNSDKRLMSSILTSIDASKPWSRCTSATITDFFDDGNAECLLDSPRTP
LLGPEELPGQSYDAVRQCRLAFGPQYTVCPGMDVCARLWCAVIRHGQMVCLTKKLPAVEG
TPCGKGRICLHGKCVDKTRKRHYSVSNHGSWSSWGPWGACSRTCGGGVQFAQRLCNNPPP
RNNGRYCTGKRAIYRSCNVPPCPASRKSFRQEQCEVRNGPQTDPKGVKTFVEWVPKYAGV
LPKDVCKLICRAKGTGYYVVFSQRVVEGTECRPYSSSVCVKGKCIRTGCDGIIGSKLQFD
KCGICGGDSTGCVRVVGNFTKKSKGYTDVVKIPIGSTHIKVRQHKAKDQTRYTAYLALRR
PNKDYLLNGKFMISTSETIIPLNGSVLNYSGWSQRDEGLHSMGPGALQESLVVQILATDA
KKPLDVRYSFFMPRRTAPQQPSAPLISNPKSTPVQSTTRTTTSTTTTSSTAPSVLVPRVP
TAPGPSTPTPGPRWVTGAWMTCSRTCDTGWQSRTVQCKNPNGKLSKGCTLGARPSAFKHC
LAKRC
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcatccttggagctctggccgagggcatgctctgctttcggctactgttgctg
tgcgtcgtggagttggacctgggagccgcgctctctactttccaaggtttctatcttcca
cctgcgaacggctcgcttctcacacctgcccggagggcagacggggtcgtgcggaccatt
gaccggatttaccacggaggagggaaggtgggctacctggtgtacttggatgggcgccgg
tttcagctggacatggagcgggacgacatggcgctgtcgcatcacttcagcccccagtat
gtgctcgctatgatgggggacagccccgcggctttgctgcgggagtgcgtgtaccggggg
acagtggactccaacccggaatccctggccgtcttcaatctttgcggcgggggtctggag
ggcttcttcgccttggaccacgcgcgctacaccatcacgcctatcattagggcgaaggga
cacgagcacaacgtgcgcgccctgcaggacaaggacgtggagagcgcgctccacgtgttc
acgcgcgagagtttcagcttcgaagccatgcgcgaggggcgcgagagctgcgggacgcgc
gacgggcgcagaggacgcagggatgcggcggggaagcgcggccggcacaggggccgcgcg
acgaggagacgggacggagagagtgacgcggaggagagcgccggtggccacggcgcgcgc
ggccgaacatggtggagccggctcgccaacgcggctgcaccggtgcatggaacgcggagc
aggaggtcggtctctcgcgccaggcacgtggagctgctcctggtggccgacgacaccatg
accaagaaatacggcaaggaattaaaccactacctgctcacactggccgccatcgcctcc
aagctgtacggccacgcgagcatcgagaaccccatccggctgacggtggtgaaagtcacc
gtggtcaccgagaaggagaaggggctcgacgtgtccaagaacgcggcggcgacgctgaag
agcttctgcaagtggcagaaccagcagaacccgctggacgacgaccaccagcagcaccac
gacgccgccatcctcttcaccaggcaggacctctgtggccaccactcctgcgacaccctc
ggcatggcggacgtcggcaccatctgctccccggcgagaagctgcgccgtcatcgaggac
gacgggcttcacgctgcgttcactgtcgcgcatgagataggtcacctgctgggcctctcc
cacgacgactccaagttctgcgaggagcgcttcggggtgaacagcgacaagcggctcatg
tcctccatcctcacctccatcgacgcctccaagccctggagccgctgcacctcggcgacc
atcacggacttcttcgacgacggcaacgccgagtgcctcctggactccccgcgcacgccg
ctgctgggccccgaggagctcccggggcagagctacgacgccgtccgccagtgccgcctg
gccttcggcccccagtacaccgtctgcccgggcatggacgtgtgcgcccgcctgtggtgc
gccgtgattcgccacggacagatggtgtgtctgaccaagaagctgccggccgtggaggga
acgccgtgcgggaaggggcgcatctgcctgcacgggaagtgcgtggacaagacccgcaag
aggcactactcggtgtccaaccacggcagctggagttcctggggtccttggggtgcgtgc
tccagaacatgcggaggcggggtccagtttgcccaacgcctgtgcaacaacccgccgccg
cggaacaacgggcgctactgcacgggaaagagagccatttatcggtcctgcaacgtcccg
ccgtgtcctgcgtcaaggaagagtttccggcaggagcaatgtgaggtgcgcaacggtccc
cagacggatccgaagggggtgaagacctttgtcgagtgggtgcctaagtacgctggagtc
ctccccaaagacgtgtgcaagttgatctgcagagcaaaaggaacgggatactacgtggtg
ttctctcagagggtggtcgaggggaccgagtgtcgtccttacagcagctcggtgtgcgtc
aaagggaagtgtatacggacaggctgcgacggcatcattggctccaagctccagttcgac
aagtgtggtatttgtggaggcgacagcaccggatgtgtacgcgttgtgggcaacttcacc
aagaagagtaaaggctacactgacgtggtgaagatccccattggctccacccacattaag
gtccgtcagcacaaggccaaggaccagacccgctacaccgcctacctggctctccgacgg
cccaacaaagactaccttctcaacggcaagttcatgatctccacctccgagacgatcatc
ccgctcaacggctctgtgctcaactacagcggctggagccagagggacgaggggcttcac
agcatgggtcccggggccctccaagaatccttggtggtccagattctagcgacggacgct
aaaaagcccctggatgtccgttatagtttcttcatgccccgacggacggccccacagcag
ccgtcggctccgctcatctccaacccgaagtccacccctgtacagagcacgacaagaacc
accaccagtaccaccactacatcttccaccgctccctccgtcctggtcccaagggtacca
accgctcccggtccctccaccccaaccccggggccccgctgggtaacgggagcctggatg
acatgctccaggacttgtgacactggctggcagagccggactgtgcagtgcaagaatccg
aatgggaaactgtccaagggctgcacgttaggtgcccgaccgtctgccttcaaacactgt
ctggcgaagagatgttga
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